RNA–Protein interactions for RNA: ENST00000572967.1

NDE1-206, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-206ENST00000572967 PREX2Q70Z35 1606 aa19.14■□□□□ 0.65
NDE1-206ENST00000572967 MADDQ8WXG6 1647 aa19.13■□□□□ 0.65
NDE1-206ENST00000572967 CDC42BPBQ9Y5S2 1711 aa19.12■□□□□ 0.65
NDE1-206ENST00000572967 ARHGAP5Q13017 1502 aa19.12■□□□□ 0.65
NDE1-206ENST00000572967 PLCH2O75038 1416 aa19.12■□□□□ 0.65
NDE1-206ENST00000572967 POGZQ7Z3K3 1410 aa19.11■□□□□ 0.65
NDE1-206ENST00000572967 RIMS1Q86UR5 1692 aaKnown RBP19.09■□□□□ 0.65
NDE1-206ENST00000572967 CDC42BPAQ5VT25 1732 aa19.08■□□□□ 0.65
NDE1-206ENST00000572967 CDK11AQ9UQ88 783 aaPredicted RBP19.08■□□□□ 0.64
NDE1-206ENST00000572967 YEATS2Q9ULM3 1422 aa19.08■□□□□ 0.64
NDE1-206ENST00000572967 SCAPERQ9BY12 1400 aa19.07■□□□□ 0.64
NDE1-206ENST00000572967 ITSN2Q9NZM3 1697 aa19.06■□□□□ 0.64
NDE1-206ENST00000572967 ABCC1P33527 1531 aa19.04■□□□□ 0.64
NDE1-206ENST00000572967 FER1L4A9Z1Z3 1794 aa19.04■□□□□ 0.64
NDE1-206ENST00000572967 KDM5CP41229 1560 aa19.03■□□□□ 0.64
NDE1-206ENST00000572967 PTPRMP28827 1452 aa19.03■□□□□ 0.64
NDE1-206ENST00000572967 ARID4BQ4LE39 1312 aaPredicted RBP19.02■□□□□ 0.64
NDE1-206ENST00000572967 MAGI2Q86UL8 1455 aa19.02■□□□□ 0.63
NDE1-206ENST00000572967 ZNF518AQ6AHZ1 1483 aa19.01■□□□□ 0.63
NDE1-206ENST00000572967 CEP162Q5TB80 1403 aa19■□□□□ 0.63
NDE1-206ENST00000572967 ABCA6Q8N139 1617 aa18.99■□□□□ 0.63
NDE1-206ENST00000572967 DIP2CQ9Y2E4 1556 aa18.98■□□□□ 0.63
NDE1-206ENST00000572967 EFCAB2Q5VUJ9 269 aa18.97■□□□□ 0.63
NDE1-206ENST00000572967 SAMD9LQ8IVG5 1584 aa18.97■□□□□ 0.63
NDE1-206ENST00000572967 C9orf84Q5VXU9 1444 aa18.96■□□□□ 0.63
NDE1-206ENST00000572967 EHBP1L1Q8N3D4 1523 aa18.94■□□□□ 0.62
NDE1-206ENST00000572967 SYCP2Q9BX26 1530 aa18.94■□□□□ 0.62
NDE1-206ENST00000572967 ARHGEF12Q9NZN5 1544 aa18.94■□□□□ 0.62
NDE1-206ENST00000572967 ATP10AO60312 1499 aa18.92■□□□□ 0.62
NDE1-206ENST00000572967 KIDINS220Q9ULH0 1771 aa18.91■□□□□ 0.62
NDE1-206ENST00000572967 TRAPPC8Q9Y2L5 1435 aa18.91■□□□□ 0.62
NDE1-206ENST00000572967 TIAM1Q13009 1591 aa18.9■□□□□ 0.62
NDE1-206ENST00000572967 REREQ9P2R6 1566 aa18.89■□□□□ 0.61
NDE1-206ENST00000572967 MLECQ14165 292 aa18.88■□□□□ 0.61
NDE1-206ENST00000572967 MTUS2Q5JR59 1369 aa18.88■□□□□ 0.61
NDE1-206ENST00000572967 GPATCH8Q9UKJ3 1502 aaKnown RBP18.88■□□□□ 0.61
NDE1-206ENST00000572967 AFAP1Q8N556 730 aa18.87■□□□□ 0.61
NDE1-206ENST00000572967 PLPPR3Q6T4P5 718 aa18.86■□□□□ 0.61
NDE1-206ENST00000572967 MYT1LQ9UL68 1186 aa18.86■□□□□ 0.61
NDE1-206ENST00000572967 LMTK3Q96Q04 1460 aa18.85■□□□□ 0.61
NDE1-206ENST00000572967 MLH3Q9UHC1 1453 aa18.85■□□□□ 0.61
NDE1-206ENST00000572967 SUPT6HQ7KZ85 1726 aaKnown RBP18.84■□□□□ 0.61
NDE1-206ENST00000572967 INO80Q9ULG1 1556 aaPredicted RBP18.84■□□□□ 0.61
NDE1-206ENST00000572967 LOC105371045A0A1W2PR82 267 aa18.83■□□□□ 0.6
NDE1-206ENST00000572967 CCNB3Q8WWL7 1395 aa18.82■□□□□ 0.6
NDE1-206ENST00000572967 ZNF777Q9ULD5 760 aaPredicted RBP18.82■□□□□ 0.6
NDE1-206ENST00000572967 ATP7AQ04656 1500 aa18.81■□□□□ 0.6
NDE1-206ENST00000572967 PREX1Q8TCU6 1659 aa18.81■□□□□ 0.6
NDE1-206ENST00000572967 C3P01024 1663 aa18.79■□□□□ 0.6
NDE1-206ENST00000572967 PLEKHH2Q8IVE3 1493 aa18.78■□□□□ 0.6
NDE1-206ENST00000572967 AGLP35573 1532 aa18.78■□□□□ 0.6
NDE1-206ENST00000572967 VPS8Q8N3P4 1428 aa18.77■□□□□ 0.6
NDE1-206ENST00000572967 CFDP1Q9UEE9 299 aaPredicted RBP18.75■□□□□ 0.59
NDE1-206ENST00000572967 NCOA2Q15596 1464 aa18.75■□□□□ 0.59
NDE1-206ENST00000572967 PLXNC1O60486 1568 aa18.75■□□□□ 0.59
NDE1-206ENST00000572967 ADGBQ8N7X0 1667 aa18.75■□□□□ 0.59
NDE1-206ENST00000572967 KIAA1107Q9UPP5 1409 aa18.74■□□□□ 0.59
NDE1-206ENST00000572967 HNRNPMP52272 730 aaKnown RBP eCLIP18.72■□□□□ 0.59
NDE1-206ENST00000572967 CAMSAP2Q08AD1 1489 aa18.71■□□□□ 0.59
NDE1-206ENST00000572967 SPAG9O60271 1321 aaKnown RBP18.71■□□□□ 0.59
NDE1-206ENST00000572967 MROH2AA6NES4 1674 aa18.7■□□□□ 0.58
NDE1-206ENST00000572967 CLTCQ00610 1675 aaKnown RBP18.69■□□□□ 0.58
NDE1-206ENST00000572967 HSPA2P54652 639 aa18.68■□□□□ 0.58
NDE1-206ENST00000572967 LRRC9Q6ZRR7 1453 aa18.68■□□□□ 0.58
NDE1-206ENST00000572967 ZNF644Q9H582 1327 aaPredicted RBP18.68■□□□□ 0.58
NDE1-206ENST00000572967 A2MP01023 1474 aa18.67■□□□□ 0.58
NDE1-206ENST00000572967 MBD5Q9P267 1494 aa18.67■□□□□ 0.58
NDE1-206ENST00000572967 CEBPAP49715 358 aaPredicted RBP18.67■□□□□ 0.58
NDE1-206ENST00000572967 CCDC141Q6ZP82 1450 aa18.65■□□□□ 0.58
NDE1-206ENST00000572967 UHRF1BP1Q6BDS2 1440 aa18.63■□□□□ 0.57
NDE1-206ENST00000572967 CNTLNQ9NXG0 1405 aa18.63■□□□□ 0.57
NDE1-206ENST00000572967 ILDR1Q86SU0 546 aaPredicted RBP18.62■□□□□ 0.57
NDE1-206ENST00000572967 MAP3K1Q13233 1512 aa18.62■□□□□ 0.57
NDE1-206ENST00000572967 ARHGEF5Q12774 1597 aa18.62■□□□□ 0.57
NDE1-206ENST00000572967 ESF1Q9H501 851 aaKnown RBP18.61■□□□□ 0.57
NDE1-206ENST00000572967 STRCQ7RTU9 1775 aa18.6■□□□□ 0.57
NDE1-206ENST00000572967 MYO3AQ8NEV4 1616 aa18.6■□□□□ 0.57
NDE1-206ENST00000572967 SETD1BQ9UPS6 1966 aaKnown RBP18.58■□□□□ 0.56
NDE1-206ENST00000572967 RTEL1-TNFRSF6BF6WH68 1400 aa18.57■□□□□ 0.56
NDE1-206ENST00000572967 ZNF142P52746 1687 aaPredicted RBP18.57■□□□□ 0.56
NDE1-206ENST00000572967 CROCC2H7BZ55 1655 aa18.57■□□□□ 0.56
NDE1-206ENST00000572967 MYOM3Q5VTT5 1437 aa18.55■□□□□ 0.56
NDE1-206ENST00000572967 MAST1Q9Y2H9 1570 aa18.55■□□□□ 0.56
NDE1-206ENST00000572967 KANK4Q5T7N3 995 aaPredicted RBP18.54■□□□□ 0.56
NDE1-206ENST00000572967 NPATQ14207 1427 aa18.51■□□□□ 0.55
NDE1-206ENST00000572967 KDM5DQ9BY66 1539 aa18.51■□□□□ 0.55
NDE1-206ENST00000572967 PTPN23Q9H3S7 1636 aa18.51■□□□□ 0.55
NDE1-206ENST00000572967 GGT6Q6P531 493 aa18.5■□□□□ 0.55
NDE1-206ENST00000572967 ZMYM3Q14202 1370 aa18.5■□□□□ 0.55
NDE1-206ENST00000572967 CEP170BQ9Y4F5 1589 aaPredicted RBP18.5■□□□□ 0.55
NDE1-206ENST00000572967 RNF17Q9BXT8 1623 aaKnown RBP18.49■□□□□ 0.55
NDE1-206ENST00000572967 DHX29Q7Z478 1369 aaKnown RBP18.48■□□□□ 0.55
NDE1-206ENST00000572967 CAMSAP1Q5T5Y3 1602 aa18.48■□□□□ 0.55
NDE1-206ENST00000572967 EIF2AK4Q9P2K8 1649 aaKnown RBP18.48■□□□□ 0.55
NDE1-206ENST00000572967 MIA2Q96PC5 1412 aa18.48■□□□□ 0.55
NDE1-206ENST00000572967 FAM135AQ9P2D6 1515 aa18.47■□□□□ 0.55
NDE1-206ENST00000572967 PTPRKQ15262 1439 aa18.47■□□□□ 0.55
NDE1-206ENST00000572967 ZC3H13Q5T200 1668 aaKnown RBP18.46■□□□□ 0.55
NDE1-206ENST00000572967 CEP152O94986 1710 aa18.46■□□□□ 0.55
NDE1-206ENST00000572967 NCOA1Q15788 1441 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms