RNA–Protein interactions for RNA: ENST00000572905.1

TOM1L1-215, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1L1, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-215ENST00000572905 ZNF710Q8N1W2 664 aa12.85□□□□□ -0.35
TOM1L1-215ENST00000572905 DOK7Q18PE1 504 aa12.84□□□□□ -0.35
TOM1L1-215ENST00000572905 PPP1R37O75864 691 aa12.83□□□□□ -0.36
TOM1L1-215ENST00000572905 SLC24A1O60721 1099 aa12.82□□□□□ -0.36
TOM1L1-215ENST00000572905 DCAF8L2P0C7V8 631 aa12.82□□□□□ -0.36
TOM1L1-215ENST00000572905 RIMBP2O15034 1052 aa12.78□□□□□ -0.36
TOM1L1-215ENST00000572905 FAM205CA6NFA0 338 aa12.77□□□□□ -0.37
TOM1L1-215ENST00000572905 NKX1-1Q15270 411 aaPredicted RBP12.76□□□□□ -0.37
TOM1L1-215ENST00000572905 C2orf72A6NCS6 295 aa12.75□□□□□ -0.37
TOM1L1-215ENST00000572905 HOXB1P14653 301 aaPredicted RBP12.74□□□□□ -0.37
TOM1L1-215ENST00000572905 HS3ST6Q96QI5 342 aa12.73□□□□□ -0.37
TOM1L1-215ENST00000572905 POTEB3A0JP26 581 aa12.72□□□□□ -0.37
TOM1L1-215ENST00000572905 KIF3CO14782 793 aa12.72□□□□□ -0.37
TOM1L1-215ENST00000572905 POTEBQ6S5H4 581 aa12.72□□□□□ -0.37
TOM1L1-215ENST00000572905 TMC2Q8TDI7 906 aa12.71□□□□□ -0.37
TOM1L1-215ENST00000572905 DNAJC5Q9H3Z4 198 aa12.7□□□□□ -0.38
TOM1L1-215ENST00000572905 ZSWIM6Q9HCJ5 1215 aa12.68□□□□□ -0.38
TOM1L1-215ENST00000572905 ERBB3P21860 1342 aa12.67□□□□□ -0.38
TOM1L1-215ENST00000572905 ARSIQ5FYB1 569 aa12.66□□□□□ -0.38
TOM1L1-215ENST00000572905 GPR153Q6NV75 609 aa12.66□□□□□ -0.38
TOM1L1-215ENST00000572905 KHSRPQ92945 711 aaKnown RBP eCLIP12.64□□□□□ -0.396e-12■■■■□ 20.1
TOM1L1-215ENST00000572905 RYDENQ9NUL5 291 aaKnown RBP12.63□□□□□ -0.39
TOM1L1-215ENST00000572905 VARS2Q5ST30 1063 aaKnown RBP12.62□□□□□ -0.39
TOM1L1-215ENST00000572905 GTPBP6O43824 516 aaPredicted RBP12.57□□□□□ -0.4
TOM1L1-215ENST00000572905 KRTAP3-3Q9BYR6 98 aa12.57□□□□□ -0.4
TOM1L1-215ENST00000572905 KRTAP3-2Q9BYR7 98 aa12.57□□□□□ -0.4
TOM1L1-215ENST00000572905 NUDT7P0C024 238 aa12.55□□□□□ -0.4
TOM1L1-215ENST00000572905 GPHNQ9NQX3 736 aaPredicted RBP12.55□□□□□ -0.4
TOM1L1-215ENST00000572905 FOXK1P85037 733 aa12.54□□□□□ -0.4
TOM1L1-215ENST00000572905 DSG2Q14126 1118 aa12.54□□□□□ -0.4
TOM1L1-215ENST00000572905 PLPP6Q8IY26 295 aa12.54□□□□□ -0.4
TOM1L1-215ENST00000572905 PCDHGA4Q9Y5G9 962 aa12.54□□□□□ -0.4
TOM1L1-215ENST00000572905 SPNS2Q8IVW8 549 aa12.53□□□□□ -0.4
TOM1L1-215ENST00000572905 SLC34A2O95436 690 aa12.52□□□□□ -0.41
TOM1L1-215ENST00000572905 ZNF316A6NFI3 1004 aaPredicted RBP12.5□□□□□ -0.41
TOM1L1-215ENST00000572905 ZNF687Q8N1G0 1237 aa12.47□□□□□ -0.41
TOM1L1-215ENST00000572905 MMRN1Q13201 1228 aa12.46□□□□□ -0.41
TOM1L1-215ENST00000572905 CRISPLD2Q9H0B8 497 aa12.46□□□□□ -0.41
TOM1L1-215ENST00000572905 LHX6Q9UPM6 363 aa12.46□□□□□ -0.41
TOM1L1-215ENST00000572905 NCKAP5LQ9HCH0 1330 aa12.44□□□□□ -0.42
TOM1L1-215ENST00000572905 PTCD2Q8WV60 388 aaKnown RBP12.43□□□□□ -0.42
TOM1L1-215ENST00000572905 PPP1R15BQ5SWA1 713 aa12.42□□□□□ -0.42
TOM1L1-215ENST00000572905 PDE4AP27815 886 aa12.41□□□□□ -0.42
TOM1L1-215ENST00000572905 UPF1Q92900 1129 aaKnown RBP eCLIP12.4□□□□□ -0.42
TOM1L1-215ENST00000572905 BBXQ8WY36 941 aaPredicted RBP12.39□□□□□ -0.43
TOM1L1-215ENST00000572905 LARP6Q9BRS8 491 aaKnown RBP12.39□□□□□ -0.43
TOM1L1-215ENST00000572905 TBC1D12O60347 775 aa12.37□□□□□ -0.43
TOM1L1-215ENST00000572905 CADPS2Q86UW7 1296 aa12.36□□□□□ -0.43
TOM1L1-215ENST00000572905 DDX27Q96GQ7 796 aaKnown RBP12.35□□□□□ -0.43
TOM1L1-215ENST00000572905 KDM4FA0A1W2PPD8 638 aa12.34□□□□□ -0.43
TOM1L1-215ENST00000572905 ANKRD13DQ6ZTN6 518 aa12.33□□□□□ -0.44
TOM1L1-215ENST00000572905 OXER1Q8TDS5 423 aa12.33□□□□□ -0.44
TOM1L1-215ENST00000572905 AXIN2Q9Y2T1 843 aa12.33□□□□□ -0.44
TOM1L1-215ENST00000572905 POTEEQ6S8J3 1075 aa12.3□□□□□ -0.44
TOM1L1-215ENST00000572905 PSDA5PKW4 1024 aaPredicted RBP12.29□□□□□ -0.44
TOM1L1-215ENST00000572905 LSM11P83369 360 aaKnown RBP eCLIP12.29□□□□□ -0.44
TOM1L1-215ENST00000572905 PBX2P40425 430 aa12.28□□□□□ -0.44
TOM1L1-215ENST00000572905 MFSD10Q14728 455 aa12.28□□□□□ -0.44
TOM1L1-215ENST00000572905 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.28□□□□□ -0.44
TOM1L1-215ENST00000572905 SPRYD3Q8NCJ5 442 aa12.27□□□□□ -0.45
TOM1L1-215ENST00000572905 PPP4R3BQ5MIZ7 849 aa12.26□□□□□ -0.45
TOM1L1-215ENST00000572905 PLCB2Q00722 1185 aa12.24□□□□□ -0.45
TOM1L1-215ENST00000572905 CFAP44Q96MT7 982 aa12.24□□□□□ -0.45
TOM1L1-215ENST00000572905 MYT1LQ9UL68 1186 aa12.24□□□□□ -0.45
TOM1L1-215ENST00000572905 RNF166Q96A37 237 aaPredicted RBP12.23□□□□□ -0.45
TOM1L1-215ENST00000572905 ARHGAP33O14559 1287 aa12.22□□□□□ -0.45
TOM1L1-215ENST00000572905 PAXIP1Q6ZW49 1069 aaPredicted RBP12.22□□□□□ -0.45
TOM1L1-215ENST00000572905 EVI5O60447 810 aa12.21□□□□□ -0.45
TOM1L1-215ENST00000572905 PSEN2P49810 448 aa12.21□□□□□ -0.45
TOM1L1-215ENST00000572905 MAP3K9P80192 1104 aa12.21□□□□□ -0.45
TOM1L1-215ENST00000572905 ZNF454Q8N9F8 522 aa12.21□□□□□ -0.45
TOM1L1-215ENST00000572905 EMILIN3Q9NT22 766 aa12.21□□□□□ -0.45
TOM1L1-215ENST00000572905 DMRTA1Q5VZB9 504 aa12.18□□□□□ -0.46
TOM1L1-215ENST00000572905 PTGER2P43116 358 aa12.17□□□□□ -0.46
TOM1L1-215ENST00000572905 KCNK17Q96T54 332 aa12.17□□□□□ -0.46
TOM1L1-215ENST00000572905 ADGRD1Q6QNK2 874 aa12.14□□□□□ -0.47
TOM1L1-215ENST00000572905 ANO8Q9HCE9 1232 aaPredicted RBP12.14□□□□□ -0.47
TOM1L1-215ENST00000572905 FOSBP53539 338 aa12.13□□□□□ -0.47
TOM1L1-215ENST00000572905 KCNH8Q96L42 1107 aa12.13□□□□□ -0.47
TOM1L1-215ENST00000572905 JPH4Q96JJ6 628 aa12.12□□□□□ -0.47
TOM1L1-215ENST00000572905 DPYSL4O14531 572 aa12.1□□□□□ -0.47
TOM1L1-215ENST00000572905 CAMK2BQ13554 666 aa12.1□□□□□ -0.47
TOM1L1-215ENST00000572905 BCL2L12Q9HB09 334 aa12.09□□□□□ -0.47
TOM1L1-215ENST00000572905 TK2O00142 265 aa12.07□□□□□ -0.48
TOM1L1-215ENST00000572905 ZDHHC16Q969W1 377 aa12.07□□□□□ -0.48
TOM1L1-215ENST00000572905 PTPREP23469 700 aa12.06□□□□□ -0.48
TOM1L1-215ENST00000572905 HAP1P54257 671 aaPredicted RBP12.06□□□□□ -0.48
TOM1L1-215ENST00000572905 ADAM33Q9BZ11 813 aa12.06□□□□□ -0.48
TOM1L1-215ENST00000572905 PCDHGA10Q9Y5H3 936 aa12.04□□□□□ -0.48
TOM1L1-215ENST00000572905 HRO43593 1189 aa12.03□□□□□ -0.48
TOM1L1-215ENST00000572905 STAC3Q96MF2 364 aa12.02□□□□□ -0.49
TOM1L1-215ENST00000572905 WDR70Q9NW82 654 aa12.02□□□□□ -0.49
TOM1L1-215ENST00000572905 VPS9D1Q9Y2B5 631 aa12.02□□□□□ -0.49
TOM1L1-215ENST00000572905 PHF14O94880 888 aa11.98□□□□□ -0.49
TOM1L1-215ENST00000572905 E2F4Q16254 413 aa11.98□□□□□ -0.49
TOM1L1-215ENST00000572905 TYW1BQ6NUM6 668 aa11.98□□□□□ -0.49
TOM1L1-215ENST00000572905 DDX12PQ92771 950 aa11.98□□□□□ -0.49
TOM1L1-215ENST00000572905 ZBED2Q9BTP6 218 aa11.97□□□□□ -0.49
TOM1L1-215ENST00000572905 FBXW7Q969H0 707 aa11.95□□□□□ -0.5
TOM1L1-215ENST00000572905 KCTD12Q96CX2 325 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms