RNA–Protein interactions for RNA: ENST00000572360.5

TOM1L1-212, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1L1, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-212ENST00000572360 KRTAP3-3Q9BYR6 98 aa9.85□□□□□ -0.83
TOM1L1-212ENST00000572360 KRTAP3-2Q9BYR7 98 aa9.85□□□□□ -0.83
TOM1L1-212ENST00000572360 FAM205CA6NFA0 338 aa9.84□□□□□ -0.83
TOM1L1-212ENST00000572360 KIF3CO14782 793 aa9.84□□□□□ -0.83
TOM1L1-212ENST00000572360 PPP1R37O75864 691 aa9.84□□□□□ -0.83
TOM1L1-212ENST00000572360 DOK7Q18PE1 504 aa9.82□□□□□ -0.84
TOM1L1-212ENST00000572360 GPR153Q6NV75 609 aa9.82□□□□□ -0.84
TOM1L1-212ENST00000572360 SPNS2Q8IVW8 549 aa9.81□□□□□ -0.84
TOM1L1-212ENST00000572360 HS6ST3Q8IZP7 471 aa9.78□□□□□ -0.84
TOM1L1-212ENST00000572360 ZNF710Q8N1W2 664 aa9.78□□□□□ -0.84
TOM1L1-212ENST00000572360 C2orf72A6NCS6 295 aa9.77□□□□□ -0.85
TOM1L1-212ENST00000572360 ZSWIM6Q9HCJ5 1215 aa9.76□□□□□ -0.85
TOM1L1-212ENST00000572360 MMRN1Q13201 1228 aa9.75□□□□□ -0.85
TOM1L1-212ENST00000572360 NKX1-1Q15270 411 aaPredicted RBP9.75□□□□□ -0.85
TOM1L1-212ENST00000572360 KHSRPQ92945 711 aaKnown RBP eCLIP9.75□□□□□ -0.85
TOM1L1-212ENST00000572360 ARSIQ5FYB1 569 aa9.74□□□□□ -0.85
TOM1L1-212ENST00000572360 DNAJC5Q9H3Z4 198 aa9.72□□□□□ -0.85
TOM1L1-212ENST00000572360 RIMBP2O15034 1052 aa9.71□□□□□ -0.86
TOM1L1-212ENST00000572360 VARS2Q5ST30 1063 aaKnown RBP9.71□□□□□ -0.86
TOM1L1-212ENST00000572360 ERBB3P21860 1342 aa9.71□□□□□ -0.86
TOM1L1-212ENST00000572360 CHGAP10645 457 aaKnown RBP9.7□□□□□ -0.86
TOM1L1-212ENST00000572360 SLC34A2O95436 690 aa9.66□□□□□ -0.86
TOM1L1-212ENST00000572360 ZNF687Q8N1G0 1237 aa9.64□□□□□ -0.87
TOM1L1-212ENST00000572360 KDM4FA0A1W2PPD8 638 aa9.63□□□□□ -0.87
TOM1L1-212ENST00000572360 ZNF316A6NFI3 1004 aaPredicted RBP9.63□□□□□ -0.87
TOM1L1-212ENST00000572360 TMC2Q8TDI7 906 aa9.63□□□□□ -0.87
TOM1L1-212ENST00000572360 PCDHGA4Q9Y5G9 962 aa9.62□□□□□ -0.87
TOM1L1-212ENST00000572360 NUDT7P0C024 238 aa9.61□□□□□ -0.87
TOM1L1-212ENST00000572360 GPHNQ9NQX3 736 aaPredicted RBP9.6□□□□□ -0.87
TOM1L1-212ENST00000572360 FOXK1P85037 733 aa9.59□□□□□ -0.87
TOM1L1-212ENST00000572360 POTEEQ6S8J3 1075 aa9.59□□□□□ -0.87
TOM1L1-212ENST00000572360 DSG2Q14126 1118 aa9.58□□□□□ -0.88
TOM1L1-212ENST00000572360 LHX6Q9UPM6 363 aa9.58□□□□□ -0.88
TOM1L1-212ENST00000572360 GTPBP6O43824 516 aaPredicted RBP9.56□□□□□ -0.88
TOM1L1-212ENST00000572360 PLPP6Q8IY26 295 aa9.56□□□□□ -0.88
TOM1L1-212ENST00000572360 PTCD2Q8WV60 388 aaKnown RBP9.56□□□□□ -0.88
TOM1L1-212ENST00000572360 CRISPLD2Q9H0B8 497 aa9.54□□□□□ -0.88
TOM1L1-212ENST00000572360 NCKAP5LQ9HCH0 1330 aa9.53□□□□□ -0.88
TOM1L1-212ENST00000572360 AXIN2Q9Y2T1 843 aa9.49□□□□□ -0.89
TOM1L1-212ENST00000572360 LSM11P83369 360 aaKnown RBP eCLIP9.48□□□□□ -0.89
TOM1L1-212ENST00000572360 ANKRD13DQ6ZTN6 518 aa9.46□□□□□ -0.9
TOM1L1-212ENST00000572360 OXER1Q8TDS5 423 aa9.46□□□□□ -0.9
TOM1L1-212ENST00000572360 RNF166Q96A37 237 aaPredicted RBP9.44□□□□□ -0.9
TOM1L1-212ENST00000572360 RYDENQ9NUL5 291 aaKnown RBP9.44□□□□□ -0.9
TOM1L1-212ENST00000572360 MYT1LQ9UL68 1186 aa9.44□□□□□ -0.9
TOM1L1-212ENST00000572360 PBX2P40425 430 aa9.43□□□□□ -0.9
TOM1L1-212ENST00000572360 PPP1R15BQ5SWA1 713 aa9.43□□□□□ -0.9
TOM1L1-212ENST00000572360 CADPS2Q86UW7 1296 aa9.43□□□□□ -0.9
TOM1L1-212ENST00000572360 DMRTA1Q5VZB9 504 aa9.4□□□□□ -0.9
TOM1L1-212ENST00000572360 ARHGAP33O14559 1287 aa9.39□□□□□ -0.91
TOM1L1-212ENST00000572360 PSEN2P49810 448 aa9.39□□□□□ -0.91
TOM1L1-212ENST00000572360 MFSD10Q14728 455 aa9.39□□□□□ -0.91
TOM1L1-212ENST00000572360 UPF1Q92900 1129 aaKnown RBP eCLIP9.39□□□□□ -0.91
TOM1L1-212ENST00000572360 PSDA5PKW4 1024 aaPredicted RBP9.38□□□□□ -0.91
TOM1L1-212ENST00000572360 PDE4AP27815 886 aa9.38□□□□□ -0.91
TOM1L1-212ENST00000572360 DCAF8L2P0C7V8 631 aa9.37□□□□□ -0.91
TOM1L1-212ENST00000572360 PTGER2P43116 358 aa9.37□□□□□ -0.91
TOM1L1-212ENST00000572360 LARP6Q9BRS8 491 aaKnown RBP9.37□□□□□ -0.91
TOM1L1-212ENST00000572360 TBC1D12O60347 775 aa9.36□□□□□ -0.91
TOM1L1-212ENST00000572360 ANO8Q9HCE9 1232 aaPredicted RBP9.36□□□□□ -0.91
TOM1L1-212ENST00000572360 ADGRD1Q6QNK2 874 aa9.35□□□□□ -0.91
TOM1L1-212ENST00000572360 EMILIN3Q9NT22 766 aa9.35□□□□□ -0.91
TOM1L1-212ENST00000572360 HRO43593 1189 aa9.34□□□□□ -0.91
TOM1L1-212ENST00000572360 DDX27Q96GQ7 796 aaKnown RBP9.33□□□□□ -0.92
TOM1L1-212ENST00000572360 PPP4R3BQ5MIZ7 849 aa9.32□□□□□ -0.92
TOM1L1-212ENST00000572360 FOSBP53539 338 aa9.31□□□□□ -0.92
TOM1L1-212ENST00000572360 TK2O00142 265 aa9.3□□□□□ -0.92
TOM1L1-212ENST00000572360 EVI5O60447 810 aa9.29□□□□□ -0.92
TOM1L1-212ENST00000572360 ZNF454Q8N9F8 522 aa9.28□□□□□ -0.92
TOM1L1-212ENST00000572360 KCNK17Q96T54 332 aa9.28□□□□□ -0.92
TOM1L1-212ENST00000572360 RTN4Q9NQC3 1192 aaKnown RBP9.28□□□□□ -0.92
TOM1L1-212ENST00000572360 BBXQ8WY36 941 aaPredicted RBP9.27□□□□□ -0.93
TOM1L1-212ENST00000572360 BCL2L12Q9HB09 334 aa9.27□□□□□ -0.93
TOM1L1-212ENST00000572360 CAMK2BQ13554 666 aa9.26□□□□□ -0.93
TOM1L1-212ENST00000572360 JPH4Q96JJ6 628 aa9.26□□□□□ -0.93
TOM1L1-212ENST00000572360 VPS9D1Q9Y2B5 631 aa9.25□□□□□ -0.93
TOM1L1-212ENST00000572360 ADAM33Q9BZ11 813 aa9.24□□□□□ -0.93
TOM1L1-212ENST00000572360 MAP3K9P80192 1104 aa9.22□□□□□ -0.93
TOM1L1-212ENST00000572360 SLC4A5Q9BY07 1137 aa9.22□□□□□ -0.93
TOM1L1-212ENST00000572360 PCDHGA10Q9Y5H3 936 aa9.22□□□□□ -0.93
TOM1L1-212ENST00000572360 BHMG1C9JSJ3 638 aaPredicted RBP9.21□□□□□ -0.94
TOM1L1-212ENST00000572360 ZBED2Q9BTP6 218 aa9.21□□□□□ -0.94
TOM1L1-212ENST00000572360 AMER1Q5JTC6 1135 aaPredicted RBP9.2□□□□□ -0.94
TOM1L1-212ENST00000572360 ZDHHC16Q969W1 377 aa9.2□□□□□ -0.94
TOM1L1-212ENST00000572360 DPYSL4O14531 572 aa9.17□□□□□ -0.94
TOM1L1-212ENST00000572360 COL9A1P20849 921 aa9.17□□□□□ -0.94
TOM1L1-212ENST00000572360 PTPREP23469 700 aa9.17□□□□□ -0.94
TOM1L1-212ENST00000572360 HCSTQ9UBK5 93 aa9.17□□□□□ -0.94
TOM1L1-212ENST00000572360 SPRYD3Q8NCJ5 442 aa9.14□□□□□ -0.95
TOM1L1-212ENST00000572360 KCTD12Q96CX2 325 aaKnown RBP9.14□□□□□ -0.95
TOM1L1-212ENST00000572360 PHF14O94880 888 aa9.13□□□□□ -0.95
TOM1L1-212ENST00000572360 PROX2Q3B8N5 592 aa9.11□□□□□ -0.95
TOM1L1-212ENST00000572360 TYW1BQ6NUM6 668 aa9.11□□□□□ -0.95
TOM1L1-212ENST00000572360 KCNH8Q96L42 1107 aa9.11□□□□□ -0.95
TOM1L1-212ENST00000572360 PPP1R3GB7ZBB8 358 aa9.1□□□□□ -0.95
TOM1L1-212ENST00000572360 PLA2G2EQ9NZK7 142 aa9.1□□□□□ -0.95
TOM1L1-212ENST00000572360 PAXIP1Q6ZW49 1069 aaPredicted RBP9.08□□□□□ -0.96
TOM1L1-212ENST00000572360 FBXW7Q969H0 707 aa9.08□□□□□ -0.96
TOM1L1-212ENST00000572360 PRIM1P49642 420 aaKnown RBP9.07□□□□□ -0.96
TOM1L1-212ENST00000572360 PDIA6Q15084 440 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms