RNA–Protein interactions for RNA: ENST00000572255.5

LITAF-211, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4 BASIC

Gene LITAF, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-211ENST00000572255 EFCAB2Q5VUJ9 269 aa28.18■■■□□ 2.1
LITAF-211ENST00000572255 ARID4BQ4LE39 1312 aaPredicted RBP28.18■■■□□ 2.1
LITAF-211ENST00000572255 ZFYVE16Q7Z3T8 1539 aa28.17■■■□□ 2.1
LITAF-211ENST00000572255 POGZQ7Z3K3 1410 aa28.17■■■□□ 2.1
LITAF-211ENST00000572255 FYCO1Q9BQS8 1478 aa28.16■■■□□ 2.1
LITAF-211ENST00000572255 MAGI2Q86UL8 1455 aa28.15■■■□□ 2.1
LITAF-211ENST00000572255 YEATS2Q9ULM3 1422 aa28.14■■■□□ 2.1
LITAF-211ENST00000572255 ARHGAP5Q13017 1502 aa28.13■■■□□ 2.09
LITAF-211ENST00000572255 PTPRMP28827 1452 aa28.12■■■□□ 2.09
LITAF-211ENST00000572255 MADDQ8WXG6 1647 aa28.11■■■□□ 2.09
LITAF-211ENST00000572255 CDC42BPBQ9Y5S2 1711 aa28.09■■■□□ 2.09
LITAF-211ENST00000572255 SIGLEC1Q9BZZ2 1709 aa28.07■■■□□ 2.08
LITAF-211ENST00000572255 PREX2Q70Z35 1606 aa28.07■■■□□ 2.08
LITAF-211ENST00000572255 ZNF518AQ6AHZ1 1483 aa28.03■■■□□ 2.08
LITAF-211ENST00000572255 RIMS1Q86UR5 1692 aaKnown RBP28.02■■■□□ 2.08
LITAF-211ENST00000572255 KDM5CP41229 1560 aa28■■■□□ 2.07
LITAF-211ENST00000572255 CDC42BPAQ5VT25 1732 aa28■■■□□ 2.07
LITAF-211ENST00000572255 ATP10AO60312 1499 aa27.99■■■□□ 2.07
LITAF-211ENST00000572255 AFAP1Q8N556 730 aa27.97■■■□□ 2.07
LITAF-211ENST00000572255 C9orf84Q5VXU9 1444 aa27.96■■■□□ 2.07
LITAF-211ENST00000572255 ABCC1P33527 1531 aa27.96■■■□□ 2.07
LITAF-211ENST00000572255 ITSN2Q9NZM3 1697 aa27.94■■■□□ 2.06
LITAF-211ENST00000572255 CEP162Q5TB80 1403 aa27.93■■■□□ 2.06
LITAF-211ENST00000572255 ARHGEF12Q9NZN5 1544 aa27.92■■■□□ 2.06
LITAF-211ENST00000572255 MLECQ14165 292 aa27.92■■■□□ 2.06
LITAF-211ENST00000572255 FER1L4A9Z1Z3 1794 aa27.91■■■□□ 2.06
LITAF-211ENST00000572255 TRAPPC8Q9Y2L5 1435 aa27.9■■■□□ 2.06
LITAF-211ENST00000572255 DIP2CQ9Y2E4 1556 aa27.9■■■□□ 2.06
LITAF-211ENST00000572255 MYT1LQ9UL68 1186 aa27.89■■■□□ 2.06
LITAF-211ENST00000572255 MLH3Q9UHC1 1453 aa27.89■■■□□ 2.05
LITAF-211ENST00000572255 GPATCH8Q9UKJ3 1502 aaKnown RBP27.87■■■□□ 2.05
LITAF-211ENST00000572255 ABCA6Q8N139 1617 aa27.86■■■□□ 2.05
LITAF-211ENST00000572255 MTUS2Q5JR59 1369 aa27.86■■■□□ 2.05
LITAF-211ENST00000572255 SAMD9LQ8IVG5 1584 aa27.85■■■□□ 2.05
LITAF-211ENST00000572255 REREQ9P2R6 1566 aa27.84■■■□□ 2.05
LITAF-211ENST00000572255 LMTK3Q96Q04 1460 aa27.83■■■□□ 2.05
LITAF-211ENST00000572255 PLPPR3Q6T4P5 718 aa27.83■■■□□ 2.05
LITAF-211ENST00000572255 ZNF777Q9ULD5 760 aaPredicted RBP27.83■■■□□ 2.05
LITAF-211ENST00000572255 KIDINS220Q9ULH0 1771 aa27.81■■■□□ 2.04
LITAF-211ENST00000572255 CCNB3Q8WWL7 1395 aa27.8■■■□□ 2.04
LITAF-211ENST00000572255 SYCP2Q9BX26 1530 aa27.8■■■□□ 2.04
LITAF-211ENST00000572255 EHBP1L1Q8N3D4 1523 aa27.79■■■□□ 2.04
LITAF-211ENST00000572255 CFDP1Q9UEE9 299 aaPredicted RBP27.77■■■□□ 2.04
LITAF-211ENST00000572255 TIAM1Q13009 1591 aa27.74■■■□□ 2.03
LITAF-211ENST00000572255 AGLP35573 1532 aa27.74■■■□□ 2.03
LITAF-211ENST00000572255 PLEKHH2Q8IVE3 1493 aa27.74■■■□□ 2.03
LITAF-211ENST00000572255 LOC105371045A0A1W2PR82 267 aa27.73■■■□□ 2.03
LITAF-211ENST00000572255 HNRNPMP52272 730 aaKnown RBP eCLIP27.73■■■□□ 2.031e-6■■■□□ 15.6
LITAF-211ENST00000572255 KIAA1107Q9UPP5 1409 aa27.73■■■□□ 2.03
LITAF-211ENST00000572255 SPAG9O60271 1321 aaKnown RBP27.69■■■□□ 2.02
LITAF-211ENST00000572255 ILDR1Q86SU0 546 aaPredicted RBP27.69■■■□□ 2.02
LITAF-211ENST00000572255 ATP7AQ04656 1500 aa27.67■■■□□ 2.02
LITAF-211ENST00000572255 INO80Q9ULG1 1556 aaPredicted RBP27.66■■■□□ 2.02
LITAF-211ENST00000572255 CEBPAP49715 358 aaPredicted RBP27.66■■■□□ 2.02
LITAF-211ENST00000572255 HSPA2P54652 639 aa27.66■■■□□ 2.02
LITAF-211ENST00000572255 PREX1Q8TCU6 1659 aa27.64■■■□□ 2.02
LITAF-211ENST00000572255 SUPT6HQ7KZ85 1726 aaKnown RBP27.64■■■□□ 2.01
LITAF-211ENST00000572255 VPS8Q8N3P4 1428 aa27.63■■■□□ 2.01
LITAF-211ENST00000572255 ZNF644Q9H582 1327 aaPredicted RBP27.63■■■□□ 2.01
LITAF-211ENST00000572255 NCOA2Q15596 1464 aa27.61■■■□□ 2.01
LITAF-211ENST00000572255 C3P01024 1663 aa27.6■■■□□ 2.01
LITAF-211ENST00000572255 ESF1Q9H501 851 aaKnown RBP27.59■■■□□ 2.01
LITAF-211ENST00000572255 MBD5Q9P267 1494 aa27.57■■■□□ 2
LITAF-211ENST00000572255 PLXNC1O60486 1568 aa27.56■■■□□ 2
LITAF-211ENST00000572255 A2MP01023 1474 aa27.56■■■□□ 2
LITAF-211ENST00000572255 SETD1BQ9UPS6 1966 aaKnown RBP27.55■■■□□ 2
LITAF-211ENST00000572255 CNTLNQ9NXG0 1405 aa27.55■■■□□ 2
LITAF-211ENST00000572255 ADGBQ8N7X0 1667 aa27.53■■■□□ 2
LITAF-211ENST00000572255 UHRF1BP1Q6BDS2 1440 aa27.52■■■□□ 2
LITAF-211ENST00000572255 LRRC9Q6ZRR7 1453 aa27.51■■■□□ 2
LITAF-211ENST00000572255 CAMSAP2Q08AD1 1489 aa27.51■■□□□ 1.99
LITAF-211ENST00000572255 MROH2AA6NES4 1674 aa27.5■■□□□ 1.99
LITAF-211ENST00000572255 RTEL1-TNFRSF6BF6WH68 1400 aa27.49■■□□□ 1.99
LITAF-211ENST00000572255 MAP3K1Q13233 1512 aa27.47■■□□□ 1.99
LITAF-211ENST00000572255 CCDC141Q6ZP82 1450 aa27.47■■□□□ 1.99
LITAF-211ENST00000572255 CLTCQ00610 1675 aaKnown RBP27.44■■□□□ 1.98
LITAF-211ENST00000572255 ZMYM3Q14202 1370 aa27.41■■□□□ 1.98
LITAF-211ENST00000572255 KANK4Q5T7N3 995 aaPredicted RBP27.41■■□□□ 1.98
LITAF-211ENST00000572255 GGT6Q6P531 493 aa27.41■■□□□ 1.98
LITAF-211ENST00000572255 STRCQ7RTU9 1775 aa27.4■■□□□ 1.98
LITAF-211ENST00000572255 ARHGEF5Q12774 1597 aa27.4■■□□□ 1.98
LITAF-211ENST00000572255 RSPH4AQ5TD94 716 aa27.4■■□□□ 1.98
LITAF-211ENST00000572255 FBXO41Q8TF61 875 aa27.4■■□□□ 1.98
LITAF-211ENST00000572255 NPATQ14207 1427 aa27.4■■□□□ 1.98
LITAF-211ENST00000572255 DHX29Q7Z478 1369 aaKnown RBP27.38■■□□□ 1.97
LITAF-211ENST00000572255 PPP6R1Q9UPN7 881 aa27.34■■□□□ 1.97
LITAF-211ENST00000572255 DMRT2Q9Y5R5 561 aa27.32■■□□□ 1.96
LITAF-211ENST00000572255 MYOM3Q5VTT5 1437 aa27.32■■□□□ 1.96
LITAF-211ENST00000572255 TSPY4P0CV99 314 aa27.31■■□□□ 1.96
LITAF-211ENST00000572255 TSPY10P0CW01 314 aa27.31■■□□□ 1.96
LITAF-211ENST00000572255 PTPRKQ15262 1439 aa27.3■■□□□ 1.96
LITAF-211ENST00000572255 MIA2Q96PC5 1412 aa27.3■■□□□ 1.96
LITAF-211ENST00000572255 KIF3BO15066 747 aa27.29■■□□□ 1.96
LITAF-211ENST00000572255 MYO3AQ8NEV4 1616 aa27.27■■□□□ 1.96
LITAF-211ENST00000572255 MAST1Q9Y2H9 1570 aa27.27■■□□□ 1.96
LITAF-211ENST00000572255 APLP2Q06481 763 aa27.26■■□□□ 1.95
LITAF-211ENST00000572255 NCOA1Q15788 1441 aa27.25■■□□□ 1.95
LITAF-211ENST00000572255 ZNF142P52746 1687 aaPredicted RBP27.25■■□□□ 1.95
LITAF-211ENST00000572255 PTPRTO14522 1441 aa27.24■■□□□ 1.95
LITAF-211ENST00000572255 CERKQ8TCT0 537 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms