RNA–Protein interactions for RNA: ENST00000572176.1

ATP2A3-211, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 428 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-211ENST00000572176 MAGI2Q86UL8 1455 aa21.13■□□□□ 0.97
ATP2A3-211ENST00000572176 YEATS2Q9ULM3 1422 aa21.12■□□□□ 0.97
ATP2A3-211ENST00000572176 CASKIN1Q8WXD9 1431 aa21.12■□□□□ 0.97
ATP2A3-211ENST00000572176 SCAPERQ9BY12 1400 aa21.12■□□□□ 0.97
ATP2A3-211ENST00000572176 SIGLEC1Q9BZZ2 1709 aa21.11■□□□□ 0.97
ATP2A3-211ENST00000572176 CLIP1P30622 1438 aa21.11■□□□□ 0.97
ATP2A3-211ENST00000572176 ARID4BQ4LE39 1312 aaPredicted RBP21.1■□□□□ 0.97
ATP2A3-211ENST00000572176 CCDC18Q5T9S5 1454 aa21.1■□□□□ 0.97
ATP2A3-211ENST00000572176 EFCAB2Q5VUJ9 269 aa21.07■□□□□ 0.96
ATP2A3-211ENST00000572176 RIMS1Q86UR5 1692 aaKnown RBP21.06■□□□□ 0.96
ATP2A3-211ENST00000572176 ARHGAP5Q13017 1502 aa21.06■□□□□ 0.96
ATP2A3-211ENST00000572176 FYCO1Q9BQS8 1478 aa21.06■□□□□ 0.96
ATP2A3-211ENST00000572176 KDM5CP41229 1560 aa21.04■□□□□ 0.96
ATP2A3-211ENST00000572176 PREX2Q70Z35 1606 aa21.04■□□□□ 0.96
ATP2A3-211ENST00000572176 ZNF518AQ6AHZ1 1483 aa21.03■□□□□ 0.96
ATP2A3-211ENST00000572176 CDC42BPBQ9Y5S2 1711 aa21.03■□□□□ 0.96
ATP2A3-211ENST00000572176 C9orf84Q5VXU9 1444 aa21■□□□□ 0.95
ATP2A3-211ENST00000572176 ATP10AO60312 1499 aa21■□□□□ 0.95
ATP2A3-211ENST00000572176 LMTK3Q96Q04 1460 aa20.98■□□□□ 0.95
ATP2A3-211ENST00000572176 ABCC1P33527 1531 aa20.98■□□□□ 0.95
ATP2A3-211ENST00000572176 FER1L4A9Z1Z3 1794 aa20.97■□□□□ 0.95
ATP2A3-211ENST00000572176 ARHGEF12Q9NZN5 1544 aa20.96■□□□□ 0.95
ATP2A3-211ENST00000572176 CDC42BPAQ5VT25 1732 aa20.95■□□□□ 0.94
ATP2A3-211ENST00000572176 DIP2CQ9Y2E4 1556 aa20.94■□□□□ 0.94
ATP2A3-211ENST00000572176 ITSN2Q9NZM3 1697 aa20.94■□□□□ 0.94
ATP2A3-211ENST00000572176 ILDR1Q86SU0 546 aaPredicted RBP20.94■□□□□ 0.94
ATP2A3-211ENST00000572176 REREQ9P2R6 1566 aa20.93■□□□□ 0.94
ATP2A3-211ENST00000572176 AFAP1Q8N556 730 aa20.92■□□□□ 0.94
ATP2A3-211ENST00000572176 MLH3Q9UHC1 1453 aa20.92■□□□□ 0.94
ATP2A3-211ENST00000572176 ABCA6Q8N139 1617 aa20.92■□□□□ 0.94
ATP2A3-211ENST00000572176 TRAPPC8Q9Y2L5 1435 aa20.9■□□□□ 0.94
ATP2A3-211ENST00000572176 MLECQ14165 292 aa20.9■□□□□ 0.94
ATP2A3-211ENST00000572176 SAMD9LQ8IVG5 1584 aa20.86■□□□□ 0.93
ATP2A3-211ENST00000572176 GPATCH8Q9UKJ3 1502 aaKnown RBP20.86■□□□□ 0.93
ATP2A3-211ENST00000572176 KIDINS220Q9ULH0 1771 aa20.85■□□□□ 0.93
ATP2A3-211ENST00000572176 AGLP35573 1532 aa20.83■□□□□ 0.93
ATP2A3-211ENST00000572176 SYCP2Q9BX26 1530 aa20.83■□□□□ 0.92
ATP2A3-211ENST00000572176 PLPPR3Q6T4P5 718 aa20.82■□□□□ 0.92
ATP2A3-211ENST00000572176 MYT1LQ9UL68 1186 aa20.81■□□□□ 0.92
ATP2A3-211ENST00000572176 CEP162Q5TB80 1403 aa20.8■□□□□ 0.92
ATP2A3-211ENST00000572176 PREX1Q8TCU6 1659 aa20.79■□□□□ 0.92
ATP2A3-211ENST00000572176 EHBP1L1Q8N3D4 1523 aa20.78■□□□□ 0.92
ATP2A3-211ENST00000572176 MTUS2Q5JR59 1369 aa20.78■□□□□ 0.92
ATP2A3-211ENST00000572176 HSPA2P54652 639 aa20.78■□□□□ 0.92
ATP2A3-211ENST00000572176 KIAA1107Q9UPP5 1409 aa20.78■□□□□ 0.92
ATP2A3-211ENST00000572176 PLEKHH2Q8IVE3 1493 aa20.77■□□□□ 0.92
ATP2A3-211ENST00000572176 CCNB3Q8WWL7 1395 aa20.76■□□□□ 0.91
ATP2A3-211ENST00000572176 TIAM1Q13009 1591 aa20.76■□□□□ 0.91
ATP2A3-211ENST00000572176 ZNF777Q9ULD5 760 aaPredicted RBP20.75■□□□□ 0.91
ATP2A3-211ENST00000572176 INO80Q9ULG1 1556 aaPredicted RBP20.75■□□□□ 0.91
ATP2A3-211ENST00000572176 ATP7AQ04656 1500 aa20.73■□□□□ 0.91
ATP2A3-211ENST00000572176 CEBPAP49715 358 aaPredicted RBP20.73■□□□□ 0.91
ATP2A3-211ENST00000572176 C3P01024 1663 aa20.73■□□□□ 0.91
ATP2A3-211ENST00000572176 CFDP1Q9UEE9 299 aaPredicted RBP20.72■□□□□ 0.91
ATP2A3-211ENST00000572176 PLXNC1O60486 1568 aa20.71■□□□□ 0.91
ATP2A3-211ENST00000572176 HNRNPMP52272 730 aaKnown RBP eCLIP20.7■□□□□ 0.9
ATP2A3-211ENST00000572176 SPAG9O60271 1321 aaKnown RBP20.7■□□□□ 0.9
ATP2A3-211ENST00000572176 UHRF1BP1Q6BDS2 1440 aa20.69■□□□□ 0.9
ATP2A3-211ENST00000572176 CNTLNQ9NXG0 1405 aa20.69■□□□□ 0.9
ATP2A3-211ENST00000572176 SETD1BQ9UPS6 1966 aaKnown RBP20.68■□□□□ 0.9
ATP2A3-211ENST00000572176 FBXO41Q8TF61 875 aa20.67■□□□□ 0.9
ATP2A3-211ENST00000572176 MROH2AA6NES4 1674 aa20.66■□□□□ 0.9
ATP2A3-211ENST00000572176 SUPT6HQ7KZ85 1726 aaKnown RBP20.66■□□□□ 0.9
ATP2A3-211ENST00000572176 MBD5Q9P267 1494 aa20.65■□□□□ 0.9
ATP2A3-211ENST00000572176 A2MP01023 1474 aa20.64■□□□□ 0.89
ATP2A3-211ENST00000572176 NCOA2Q15596 1464 aa20.63■□□□□ 0.89
ATP2A3-211ENST00000572176 ESF1Q9H501 851 aaKnown RBP20.63■□□□□ 0.89
ATP2A3-211ENST00000572176 STRCQ7RTU9 1775 aa20.62■□□□□ 0.89
ATP2A3-211ENST00000572176 ZNF644Q9H582 1327 aaPredicted RBP20.62■□□□□ 0.89
ATP2A3-211ENST00000572176 ADGBQ8N7X0 1667 aa20.62■□□□□ 0.89
ATP2A3-211ENST00000572176 VPS8Q8N3P4 1428 aa20.6■□□□□ 0.89
ATP2A3-211ENST00000572176 RTEL1-TNFRSF6BF6WH68 1400 aa20.59■□□□□ 0.89
ATP2A3-211ENST00000572176 NPATQ14207 1427 aa20.59■□□□□ 0.89
ATP2A3-211ENST00000572176 CAMSAP2Q08AD1 1489 aa20.57■□□□□ 0.88
ATP2A3-211ENST00000572176 CLTCQ00610 1675 aaKnown RBP20.57■□□□□ 0.88
ATP2A3-211ENST00000572176 CCDC141Q6ZP82 1450 aa20.56■□□□□ 0.88
ATP2A3-211ENST00000572176 ZMYM3Q14202 1370 aa20.55■□□□□ 0.88
ATP2A3-211ENST00000572176 LRRC9Q6ZRR7 1453 aa20.54■□□□□ 0.88
ATP2A3-211ENST00000572176 LOC105371045A0A1W2PR82 267 aa20.53■□□□□ 0.88
ATP2A3-211ENST00000572176 ARHGEF5Q12774 1597 aa20.52■□□□□ 0.88
ATP2A3-211ENST00000572176 DMRT2Q9Y5R5 561 aa20.51■□□□□ 0.87
ATP2A3-211ENST00000572176 MAP3K1Q13233 1512 aa20.51■□□□□ 0.87
ATP2A3-211ENST00000572176 PTPRTO14522 1441 aa20.51■□□□□ 0.87
ATP2A3-211ENST00000572176 NCOA1Q15788 1441 aa20.51■□□□□ 0.87
ATP2A3-211ENST00000572176 DHX29Q7Z478 1369 aaKnown RBP20.5■□□□□ 0.87
ATP2A3-211ENST00000572176 MYO3AQ8NEV4 1616 aa20.5■□□□□ 0.87
ATP2A3-211ENST00000572176 CERKQ8TCT0 537 aa20.5■□□□□ 0.87
ATP2A3-211ENST00000572176 ZNF142P52746 1687 aaPredicted RBP20.5■□□□□ 0.87
ATP2A3-211ENST00000572176 PPP6R1Q9UPN7 881 aa20.49■□□□□ 0.87
ATP2A3-211ENST00000572176 PTPRKQ15262 1439 aa20.49■□□□□ 0.87
ATP2A3-211ENST00000572176 GGT6Q6P531 493 aa20.48■□□□□ 0.87
ATP2A3-211ENST00000572176 RSPH4AQ5TD94 716 aa20.47■□□□□ 0.87
ATP2A3-211ENST00000572176 FAM135AQ9P2D6 1515 aa20.47■□□□□ 0.87
ATP2A3-211ENST00000572176 CAMSAP1Q5T5Y3 1602 aa20.46■□□□□ 0.87
ATP2A3-211ENST00000572176 CEP170BQ9Y4F5 1589 aaPredicted RBP20.45■□□□□ 0.86
ATP2A3-211ENST00000572176 KDM5DQ9BY66 1539 aa20.43■□□□□ 0.86
ATP2A3-211ENST00000572176 MAST1Q9Y2H9 1570 aa20.42■□□□□ 0.86
ATP2A3-211ENST00000572176 PLA2R1Q13018 1463 aa20.42■□□□□ 0.86
ATP2A3-211ENST00000572176 KANK4Q5T7N3 995 aaPredicted RBP20.41■□□□□ 0.86
ATP2A3-211ENST00000572176 MYOM3Q5VTT5 1437 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms