RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 MAP3K1Q13233 1512 aa11.08□□□□□ -0.64
SMG6-209ENST00000571442 RICTORQ6R327 1708 aa11.07□□□□□ -0.64
SMG6-209ENST00000571442 RAPGEF3O95398 923 aa11.07□□□□□ -0.64
SMG6-209ENST00000571442 ARHGAP5Q13017 1502 aa11.07□□□□□ -0.64
SMG6-209ENST00000571442 CFAP74Q9C0B2 1584 aa11.07□□□□□ -0.64
SMG6-209ENST00000571442 NCOA2Q15596 1464 aa11.06□□□□□ -0.64
SMG6-209ENST00000571442 ARHGEF12Q9NZN5 1544 aa11.06□□□□□ -0.64
SMG6-209ENST00000571442 SUPT6HQ7KZ85 1726 aaKnown RBP11.06□□□□□ -0.64
SMG6-209ENST00000571442 SAMD9LQ8IVG5 1584 aa11.05□□□□□ -0.64
SMG6-209ENST00000571442 ADGRL1O94910 1474 aa11.05□□□□□ -0.64
SMG6-209ENST00000571442 ABCC1P33527 1531 aa11.04□□□□□ -0.64
SMG6-209ENST00000571442 PHLDB1Q86UU1 1377 aa11.03□□□□□ -0.64
SMG6-209ENST00000571442 SCAPERQ9BY12 1400 aa11.03□□□□□ -0.64
SMG6-209ENST00000571442 KDM4FA0A1W2PPD8 638 aa11.03□□□□□ -0.64
SMG6-209ENST00000571442 EFCAB2Q5VUJ9 269 aa11.03□□□□□ -0.64
SMG6-209ENST00000571442 DENND4BO75064 1496 aaPredicted RBP11.03□□□□□ -0.64
SMG6-209ENST00000571442 CCNB3Q8WWL7 1395 aa11.03□□□□□ -0.64
SMG6-209ENST00000571442 ITSN2Q9NZM3 1697 aa11.02□□□□□ -0.64
SMG6-209ENST00000571442 ZNF644Q9H582 1327 aaPredicted RBP11.02□□□□□ -0.65
SMG6-209ENST00000571442 POGZQ7Z3K3 1410 aa11.01□□□□□ -0.65
SMG6-209ENST00000571442 TRAPPC8Q9Y2L5 1435 aa11.01□□□□□ -0.65
SMG6-209ENST00000571442 SIGLEC1Q9BZZ2 1709 aa11.01□□□□□ -0.65
SMG6-209ENST00000571442 ZMYM4Q5VZL5 1548 aa11□□□□□ -0.65
SMG6-209ENST00000571442 SYCP2Q9BX26 1530 aa11□□□□□ -0.65
SMG6-209ENST00000571442 ZNF777Q9ULD5 760 aaPredicted RBP11□□□□□ -0.65
SMG6-209ENST00000571442 YEATS2Q9ULM3 1422 aa11□□□□□ -0.65
SMG6-209ENST00000571442 AFAP1Q8N556 730 aa10.99□□□□□ -0.65
SMG6-209ENST00000571442 CFDP1Q9UEE9 299 aaPredicted RBP10.99□□□□□ -0.65
SMG6-209ENST00000571442 KDM5CP41229 1560 aa10.99□□□□□ -0.65
SMG6-209ENST00000571442 PPARGC1BQ86YN6 1023 aaKnown RBP10.98□□□□□ -0.65
SMG6-209ENST00000571442 HNRNPMP52272 730 aaKnown RBP eCLIP10.97□□□□□ -0.65
SMG6-209ENST00000571442 APLP2Q06481 763 aa10.97□□□□□ -0.65
SMG6-209ENST00000571442 MBD5Q9P267 1494 aa10.97□□□□□ -0.65
SMG6-209ENST00000571442 ARHGEF40Q8TER5 1519 aa10.97□□□□□ -0.65
SMG6-209ENST00000571442 CAMSAP2Q08AD1 1489 aa10.96□□□□□ -0.65
SMG6-209ENST00000571442 ZFYVE16Q7Z3T8 1539 aa10.95□□□□□ -0.66
SMG6-209ENST00000571442 ZNF518AQ6AHZ1 1483 aa10.95□□□□□ -0.66
SMG6-209ENST00000571442 MYOM3Q5VTT5 1437 aa10.95□□□□□ -0.66
SMG6-209ENST00000571442 KIDINS220Q9ULH0 1771 aa10.95□□□□□ -0.66
SMG6-209ENST00000571442 ABCA6Q8N139 1617 aa10.95□□□□□ -0.66
SMG6-209ENST00000571442 HECW2Q9P2P5 1572 aa10.94□□□□□ -0.66
SMG6-209ENST00000571442 KIAA1107Q9UPP5 1409 aa10.94□□□□□ -0.66
SMG6-209ENST00000571442 DIP2CQ9Y2E4 1556 aa10.94□□□□□ -0.66
SMG6-209ENST00000571442 PLEKHH2Q8IVE3 1493 aa10.93□□□□□ -0.66
SMG6-209ENST00000571442 INO80Q9ULG1 1556 aaPredicted RBP10.92□□□□□ -0.66
SMG6-209ENST00000571442 MAGI2Q86UL8 1455 aa10.92□□□□□ -0.66
SMG6-209ENST00000571442 MLH3Q9UHC1 1453 aa10.92□□□□□ -0.66
SMG6-209ENST00000571442 MIA2Q96PC5 1412 aa10.92□□□□□ -0.66
SMG6-209ENST00000571442 PTPN23Q9H3S7 1636 aa10.91□□□□□ -0.66
SMG6-209ENST00000571442 FGD6Q6ZV73 1430 aa10.91□□□□□ -0.66
SMG6-209ENST00000571442 ARHGEF5Q12774 1597 aa10.9□□□□□ -0.67
SMG6-209ENST00000571442 ATP7AQ04656 1500 aa10.89□□□□□ -0.67
SMG6-209ENST00000571442 ATP10AO60312 1499 aa10.89□□□□□ -0.67
SMG6-209ENST00000571442 TCOF1Q13428 1488 aaKnown RBP10.89□□□□□ -0.67
SMG6-209ENST00000571442 CCDC141Q6ZP82 1450 aa10.89□□□□□ -0.67
SMG6-209ENST00000571442 BCORL1Q5H9F3 1711 aa10.88□□□□□ -0.67
SMG6-209ENST00000571442 C9orf84Q5VXU9 1444 aa10.88□□□□□ -0.67
SMG6-209ENST00000571442 ADAMTSL3P82987 1691 aa10.88□□□□□ -0.67
SMG6-209ENST00000571442 SPAG9O60271 1321 aaKnown RBP10.87□□□□□ -0.67
SMG6-209ENST00000571442 ADGBQ8N7X0 1667 aa10.87□□□□□ -0.67
SMG6-209ENST00000571442 REREQ9P2R6 1566 aa10.86□□□□□ -0.67
SMG6-209ENST00000571442 CROCC2H7BZ55 1655 aa10.86□□□□□ -0.67
SMG6-209ENST00000571442 ABCC5O15440 1437 aa10.86□□□□□ -0.67
SMG6-209ENST00000571442 MYT1LQ9UL68 1186 aa10.86□□□□□ -0.67
SMG6-209ENST00000571442 DNMT1P26358 1616 aaKnown RBP10.85□□□□□ -0.67
SMG6-209ENST00000571442 MADDQ8WXG6 1647 aa10.85□□□□□ -0.67
SMG6-209ENST00000571442 PLXNC1O60486 1568 aa10.85□□□□□ -0.67
SMG6-209ENST00000571442 MAST1Q9Y2H9 1570 aa10.85□□□□□ -0.67
SMG6-209ENST00000571442 RTEL1-TNFRSF6BF6WH68 1400 aa10.84□□□□□ -0.67
SMG6-209ENST00000571442 DAPK1P53355 1430 aa10.84□□□□□ -0.67
SMG6-209ENST00000571442 ARID4BQ4LE39 1312 aaPredicted RBP10.84□□□□□ -0.67
SMG6-209ENST00000571442 MLECQ14165 292 aa10.83□□□□□ -0.68
SMG6-209ENST00000571442 AGLP35573 1532 aa10.83□□□□□ -0.68
SMG6-209ENST00000571442 PTPRKQ15262 1439 aa10.83□□□□□ -0.68
SMG6-209ENST00000571442 A2MP01023 1474 aa10.82□□□□□ -0.68
SMG6-209ENST00000571442 FAM50AQ14320 339 aaKnown RBP10.82□□□□□ -0.68
SMG6-209ENST00000571442 RIMS1Q86UR5 1692 aaKnown RBP10.82□□□□□ -0.68
SMG6-209ENST00000571442 RSPH4AQ5TD94 716 aa10.81□□□□□ -0.68
SMG6-209ENST00000571442 SHANK2Q9UPX8 1470 aa10.81□□□□□ -0.68
SMG6-209ENST00000571442 FER1L4A9Z1Z3 1794 aa10.8□□□□□ -0.68
SMG6-209ENST00000571442 RRBP1Q9P2E9 1410 aaKnown RBP10.79□□□□□ -0.68
SMG6-209ENST00000571442 CHIC2Q9UKJ5 165 aa10.79□□□□□ -0.68
SMG6-209ENST00000571442 DHX29Q7Z478 1369 aaKnown RBP10.78□□□□□ -0.68
SMG6-209ENST00000571442 TSPY4P0CV99 314 aa10.78□□□□□ -0.68
SMG6-209ENST00000571442 TSPY10P0CW01 314 aa10.78□□□□□ -0.68
SMG6-209ENST00000571442 PTPRMP28827 1452 aa10.78□□□□□ -0.68
SMG6-209ENST00000571442 ADGRL2O95490 1459 aa10.76□□□□□ -0.69
SMG6-209ENST00000571442 ILDR1Q86SU0 546 aaPredicted RBP10.76□□□□□ -0.69
SMG6-209ENST00000571442 RRP7BPQ9NSQ0 103 aa10.76□□□□□ -0.69
SMG6-209ENST00000571442 MROH1Q8NDA8 1641 aa10.76□□□□□ -0.69
SMG6-209ENST00000571442 NCOA1Q15788 1441 aa10.75□□□□□ -0.69
SMG6-209ENST00000571442 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.75□□□□□ -0.69
SMG6-209ENST00000571442 KIF15Q9NS87 1388 aa10.75□□□□□ -0.69
SMG6-209ENST00000571442 DUOX2Q9NRD8 1548 aa10.74□□□□□ -0.69
SMG6-209ENST00000571442 CLTCQ00610 1675 aaKnown RBP10.74□□□□□ -0.69
SMG6-209ENST00000571442 KIF3BO15066 747 aa10.74□□□□□ -0.69
SMG6-209ENST00000571442 ITGAEP38570 1179 aa10.74□□□□□ -0.69
SMG6-209ENST00000571442 CEBPAP49715 358 aaPredicted RBP10.74□□□□□ -0.69
SMG6-209ENST00000571442 PLPPR3Q6T4P5 718 aa10.74□□□□□ -0.69
SMG6-209ENST00000571442 RNF17Q9BXT8 1623 aaKnown RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 151.1 ms