RNA–Protein interactions for RNA: ENST00000571346.1

PRPF8-202, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-202ENST00000571346 SCAPERQ9BY12 1400 aa22.09■■□□□ 1.13
PRPF8-202ENST00000571346 BCORL1Q5H9F3 1711 aa22.08■■□□□ 1.12
PRPF8-202ENST00000571346 ARID4BQ4LE39 1312 aaPredicted RBP22.07■■□□□ 1.12
PRPF8-202ENST00000571346 PREX2Q70Z35 1606 aa22.07■■□□□ 1.12
PRPF8-202ENST00000571346 ADAMTSL3P82987 1691 aa22.07■■□□□ 1.12
PRPF8-202ENST00000571346 EFCAB2Q5VUJ9 269 aa22.05■■□□□ 1.12
PRPF8-202ENST00000571346 MADDQ8WXG6 1647 aa22.05■■□□□ 1.12
PRPF8-202ENST00000571346 YEATS2Q9ULM3 1422 aa22.05■■□□□ 1.12
PRPF8-202ENST00000571346 HECW2Q9P2P5 1572 aa22.04■■□□□ 1.12
PRPF8-202ENST00000571346 CDC42BPBQ9Y5S2 1711 aa22.04■■□□□ 1.12
PRPF8-202ENST00000571346 CEP162Q5TB80 1403 aa22.04■■□□□ 1.12
PRPF8-202ENST00000571346 MAGI2Q86UL8 1455 aa22.03■■□□□ 1.12
PRPF8-202ENST00000571346 CDC42BPAQ5VT25 1732 aa22■■□□□ 1.11
PRPF8-202ENST00000571346 SIGLEC1Q9BZZ2 1709 aa22■■□□□ 1.11
PRPF8-202ENST00000571346 ZNF518AQ6AHZ1 1483 aa22■■□□□ 1.11
PRPF8-202ENST00000571346 RIMS1Q86UR5 1692 aaKnown RBP21.98■■□□□ 1.11
PRPF8-202ENST00000571346 PTPRMP28827 1452 aa21.98■■□□□ 1.11
PRPF8-202ENST00000571346 ABCC1P33527 1531 aa21.98■■□□□ 1.11
PRPF8-202ENST00000571346 KDM5CP41229 1560 aa21.97■■□□□ 1.11
PRPF8-202ENST00000571346 ITSN2Q9NZM3 1697 aa21.96■■□□□ 1.11
PRPF8-202ENST00000571346 C9orf84Q5VXU9 1444 aa21.93■■□□□ 1.1
PRPF8-202ENST00000571346 MTUS2Q5JR59 1369 aa21.92■■□□□ 1.1
PRPF8-202ENST00000571346 MYT1LQ9UL68 1186 aa21.91■■□□□ 1.1
PRPF8-202ENST00000571346 FER1L4A9Z1Z3 1794 aa21.91■■□□□ 1.1
PRPF8-202ENST00000571346 EHBP1L1Q8N3D4 1523 aa21.9■■□□□ 1.1
PRPF8-202ENST00000571346 ATP10AO60312 1499 aa21.9■■□□□ 1.1
PRPF8-202ENST00000571346 DIP2CQ9Y2E4 1556 aa21.9■■□□□ 1.1
PRPF8-202ENST00000571346 ABCA6Q8N139 1617 aa21.89■■□□□ 1.09
PRPF8-202ENST00000571346 AFAP1Q8N556 730 aa21.89■■□□□ 1.09
PRPF8-202ENST00000571346 SAMD9LQ8IVG5 1584 aa21.89■■□□□ 1.09
PRPF8-202ENST00000571346 ARHGEF12Q9NZN5 1544 aa21.89■■□□□ 1.09
PRPF8-202ENST00000571346 MLECQ14165 292 aa21.88■■□□□ 1.09
PRPF8-202ENST00000571346 SYCP2Q9BX26 1530 aa21.88■■□□□ 1.09
PRPF8-202ENST00000571346 TRAPPC8Q9Y2L5 1435 aa21.88■■□□□ 1.09
PRPF8-202ENST00000571346 GPATCH8Q9UKJ3 1502 aaKnown RBP21.87■■□□□ 1.09
PRPF8-202ENST00000571346 ZNF777Q9ULD5 760 aaPredicted RBP21.86■■□□□ 1.09
PRPF8-202ENST00000571346 CCNB3Q8WWL7 1395 aa21.85■■□□□ 1.09
PRPF8-202ENST00000571346 PLPPR3Q6T4P5 718 aa21.84■■□□□ 1.09
PRPF8-202ENST00000571346 MLH3Q9UHC1 1453 aa21.83■■□□□ 1.09
PRPF8-202ENST00000571346 TIAM1Q13009 1591 aa21.83■■□□□ 1.09
PRPF8-202ENST00000571346 LOC105371045A0A1W2PR82 267 aa21.82■■□□□ 1.08
PRPF8-202ENST00000571346 REREQ9P2R6 1566 aa21.81■■□□□ 1.08
PRPF8-202ENST00000571346 KIDINS220Q9ULH0 1771 aa21.8■■□□□ 1.08
PRPF8-202ENST00000571346 CFDP1Q9UEE9 299 aaPredicted RBP21.79■■□□□ 1.08
PRPF8-202ENST00000571346 VPS8Q8N3P4 1428 aa21.78■■□□□ 1.08
PRPF8-202ENST00000571346 SUPT6HQ7KZ85 1726 aaKnown RBP21.77■■□□□ 1.08
PRPF8-202ENST00000571346 PLEKHH2Q8IVE3 1493 aa21.77■■□□□ 1.08
PRPF8-202ENST00000571346 LMTK3Q96Q04 1460 aa21.77■■□□□ 1.07
PRPF8-202ENST00000571346 ATP7AQ04656 1500 aa21.74■■□□□ 1.07
PRPF8-202ENST00000571346 INO80Q9ULG1 1556 aaPredicted RBP21.74■■□□□ 1.07
PRPF8-202ENST00000571346 HNRNPMP52272 730 aaKnown RBP eCLIP21.73■■□□□ 1.07
PRPF8-202ENST00000571346 KIAA1107Q9UPP5 1409 aa21.72■■□□□ 1.07
PRPF8-202ENST00000571346 NCOA2Q15596 1464 aa21.72■■□□□ 1.07
PRPF8-202ENST00000571346 SPAG9O60271 1321 aaKnown RBP21.72■■□□□ 1.07
PRPF8-202ENST00000571346 AGLP35573 1532 aa21.71■■□□□ 1.07
PRPF8-202ENST00000571346 PREX1Q8TCU6 1659 aa21.66■■□□□ 1.06
PRPF8-202ENST00000571346 ZNF644Q9H582 1327 aaPredicted RBP21.66■■□□□ 1.06
PRPF8-202ENST00000571346 CAMSAP2Q08AD1 1489 aa21.65■■□□□ 1.06
PRPF8-202ENST00000571346 LRRC9Q6ZRR7 1453 aa21.65■■□□□ 1.06
PRPF8-202ENST00000571346 PLXNC1O60486 1568 aa21.65■■□□□ 1.06
PRPF8-202ENST00000571346 C3P01024 1663 aa21.63■■□□□ 1.05
PRPF8-202ENST00000571346 ESF1Q9H501 851 aaKnown RBP21.63■■□□□ 1.05
PRPF8-202ENST00000571346 ADGBQ8N7X0 1667 aa21.63■■□□□ 1.05
PRPF8-202ENST00000571346 CEBPAP49715 358 aaPredicted RBP21.62■■□□□ 1.05
PRPF8-202ENST00000571346 HSPA2P54652 639 aa21.62■■□□□ 1.05
PRPF8-202ENST00000571346 A2MP01023 1474 aa21.62■■□□□ 1.05
PRPF8-202ENST00000571346 MBD5Q9P267 1494 aa21.62■■□□□ 1.05
PRPF8-202ENST00000571346 CCDC141Q6ZP82 1450 aa21.6■■□□□ 1.05
PRPF8-202ENST00000571346 CNTLNQ9NXG0 1405 aa21.58■■□□□ 1.05
PRPF8-202ENST00000571346 MAP3K1Q13233 1512 aa21.58■■□□□ 1.04
PRPF8-202ENST00000571346 MROH2AA6NES4 1674 aa21.56■■□□□ 1.04
PRPF8-202ENST00000571346 UHRF1BP1Q6BDS2 1440 aa21.55■■□□□ 1.04
PRPF8-202ENST00000571346 CLTCQ00610 1675 aaKnown RBP21.55■■□□□ 1.04
PRPF8-202ENST00000571346 ARHGEF5Q12774 1597 aa21.53■■□□□ 1.04
PRPF8-202ENST00000571346 KANK4Q5T7N3 995 aaPredicted RBP21.53■■□□□ 1.04
PRPF8-202ENST00000571346 RTEL1-TNFRSF6BF6WH68 1400 aa21.53■■□□□ 1.04
PRPF8-202ENST00000571346 ILDR1Q86SU0 546 aaPredicted RBP21.51■■□□□ 1.03
PRPF8-202ENST00000571346 MYOM3Q5VTT5 1437 aa21.5■■□□□ 1.03
PRPF8-202ENST00000571346 APLP2Q06481 763 aa21.48■■□□□ 1.03
PRPF8-202ENST00000571346 GGT6Q6P531 493 aa21.48■■□□□ 1.03
PRPF8-202ENST00000571346 SETD1BQ9UPS6 1966 aaKnown RBP21.46■■□□□ 1.03
PRPF8-202ENST00000571346 ZMYM3Q14202 1370 aa21.44■■□□□ 1.02
PRPF8-202ENST00000571346 DHX29Q7Z478 1369 aaKnown RBP21.44■■□□□ 1.02
PRPF8-202ENST00000571346 NPATQ14207 1427 aa21.44■■□□□ 1.02
PRPF8-202ENST00000571346 MIA2Q96PC5 1412 aa21.44■■□□□ 1.02
PRPF8-202ENST00000571346 RSPH4AQ5TD94 716 aa21.43■■□□□ 1.02
PRPF8-202ENST00000571346 MAST1Q9Y2H9 1570 aa21.43■■□□□ 1.02
PRPF8-202ENST00000571346 MYO3AQ8NEV4 1616 aa21.43■■□□□ 1.02
PRPF8-202ENST00000571346 STRCQ7RTU9 1775 aa21.41■■□□□ 1.02
PRPF8-202ENST00000571346 TSPY4P0CV99 314 aa21.41■■□□□ 1.02
PRPF8-202ENST00000571346 TSPY10P0CW01 314 aa21.41■■□□□ 1.02
PRPF8-202ENST00000571346 KDM5DQ9BY66 1539 aa21.4■■□□□ 1.02
PRPF8-202ENST00000571346 PTPN23Q9H3S7 1636 aa21.4■■□□□ 1.02
PRPF8-202ENST00000571346 KIF3BO15066 747 aa21.39■■□□□ 1.01
PRPF8-202ENST00000571346 CROCC2H7BZ55 1655 aa21.39■■□□□ 1.01
PRPF8-202ENST00000571346 ZNF142P52746 1687 aaPredicted RBP21.37■■□□□ 1.01
PRPF8-202ENST00000571346 PTPRKQ15262 1439 aa21.37■■□□□ 1.01
PRPF8-202ENST00000571346 FAM135AQ9P2D6 1515 aa21.36■■□□□ 1.01
PRPF8-202ENST00000571346 CEP170BQ9Y4F5 1589 aaPredicted RBP21.36■■□□□ 1.01
PRPF8-202ENST00000571346 CAMSAP1Q5T5Y3 1602 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms