RNA–Protein interactions for RNA: ENST00000571309.1

PSMB6-202, Transcript of proteasome subunit beta 6, humanhuman

TSL 3

Gene PSMB6, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB6-202ENST00000571309 MADDQ8WXG6 1647 aa22.55■■□□□ 1.2
PSMB6-202ENST00000571309 POGZQ7Z3K3 1410 aa22.55■■□□□ 1.2
PSMB6-202ENST00000571309 EFCAB2Q5VUJ9 269 aa22.54■■□□□ 1.2
PSMB6-202ENST00000571309 CLIP1P30622 1438 aa22.54■■□□□ 1.2
PSMB6-202ENST00000571309 CASKIN1Q8WXD9 1431 aa22.54■■□□□ 1.2
PSMB6-202ENST00000571309 YEATS2Q9ULM3 1422 aa22.54■■□□□ 1.2
PSMB6-202ENST00000571309 PCF11O94913 1555 aaKnown RBP22.52■■□□□ 1.2
PSMB6-202ENST00000571309 CCDC18Q5T9S5 1454 aa22.5■■□□□ 1.19
PSMB6-202ENST00000571309 SIGLEC1Q9BZZ2 1709 aa22.49■■□□□ 1.19
PSMB6-202ENST00000571309 ARHGAP5Q13017 1502 aa22.47■■□□□ 1.19
PSMB6-202ENST00000571309 RIMS1Q86UR5 1692 aaKnown RBP22.46■■□□□ 1.19
PSMB6-202ENST00000571309 FYCO1Q9BQS8 1478 aa22.45■■□□□ 1.18
PSMB6-202ENST00000571309 CDC42BPBQ9Y5S2 1711 aa22.44■■□□□ 1.18
PSMB6-202ENST00000571309 ATP10AO60312 1499 aa22.43■■□□□ 1.18
PSMB6-202ENST00000571309 ZNF518AQ6AHZ1 1483 aa22.43■■□□□ 1.18
PSMB6-202ENST00000571309 KDM5CP41229 1560 aa22.42■■□□□ 1.18
PSMB6-202ENST00000571309 PREX2Q70Z35 1606 aa22.41■■□□□ 1.18
PSMB6-202ENST00000571309 C9orf84Q5VXU9 1444 aa22.4■■□□□ 1.18
PSMB6-202ENST00000571309 ILDR1Q86SU0 546 aaPredicted RBP22.39■■□□□ 1.17
PSMB6-202ENST00000571309 AFAP1Q8N556 730 aa22.38■■□□□ 1.17
PSMB6-202ENST00000571309 LMTK3Q96Q04 1460 aa22.37■■□□□ 1.17
PSMB6-202ENST00000571309 FER1L4A9Z1Z3 1794 aa22.36■■□□□ 1.17
PSMB6-202ENST00000571309 CDC42BPAQ5VT25 1732 aa22.35■■□□□ 1.17
PSMB6-202ENST00000571309 MLECQ14165 292 aa22.35■■□□□ 1.17
PSMB6-202ENST00000571309 ABCC1P33527 1531 aa22.35■■□□□ 1.17
PSMB6-202ENST00000571309 ARHGEF12Q9NZN5 1544 aa22.35■■□□□ 1.17
PSMB6-202ENST00000571309 MLH3Q9UHC1 1453 aa22.33■■□□□ 1.16
PSMB6-202ENST00000571309 DIP2CQ9Y2E4 1556 aa22.32■■□□□ 1.16
PSMB6-202ENST00000571309 ITSN2Q9NZM3 1697 aa22.32■■□□□ 1.16
PSMB6-202ENST00000571309 TRAPPC8Q9Y2L5 1435 aa22.31■■□□□ 1.16
PSMB6-202ENST00000571309 REREQ9P2R6 1566 aa22.31■■□□□ 1.16
PSMB6-202ENST00000571309 ABCA6Q8N139 1617 aa22.28■■□□□ 1.16
PSMB6-202ENST00000571309 GPATCH8Q9UKJ3 1502 aaKnown RBP22.27■■□□□ 1.16
PSMB6-202ENST00000571309 PLPPR3Q6T4P5 718 aa22.27■■□□□ 1.16
PSMB6-202ENST00000571309 MYT1LQ9UL68 1186 aa22.27■■□□□ 1.16
PSMB6-202ENST00000571309 SAMD9LQ8IVG5 1584 aa22.25■■□□□ 1.15
PSMB6-202ENST00000571309 KIDINS220Q9ULH0 1771 aa22.24■■□□□ 1.15
PSMB6-202ENST00000571309 AGLP35573 1532 aa22.23■■□□□ 1.15
PSMB6-202ENST00000571309 HSPA2P54652 639 aa22.21■■□□□ 1.15
PSMB6-202ENST00000571309 ZNF777Q9ULD5 760 aaPredicted RBP22.21■■□□□ 1.15
PSMB6-202ENST00000571309 MTUS2Q5JR59 1369 aa22.2■■□□□ 1.14
PSMB6-202ENST00000571309 CEP162Q5TB80 1403 aa22.2■■□□□ 1.14
PSMB6-202ENST00000571309 SYCP2Q9BX26 1530 aa22.2■■□□□ 1.14
PSMB6-202ENST00000571309 KIAA1107Q9UPP5 1409 aa22.18■■□□□ 1.14
PSMB6-202ENST00000571309 CCNB3Q8WWL7 1395 aa22.18■■□□□ 1.14
PSMB6-202ENST00000571309 PLEKHH2Q8IVE3 1493 aa22.17■■□□□ 1.14
PSMB6-202ENST00000571309 CEBPAP49715 358 aaPredicted RBP22.17■■□□□ 1.14
PSMB6-202ENST00000571309 CFDP1Q9UEE9 299 aaPredicted RBP22.17■■□□□ 1.14
PSMB6-202ENST00000571309 PREX1Q8TCU6 1659 aa22.17■■□□□ 1.14
PSMB6-202ENST00000571309 HNRNPMP52272 730 aaKnown RBP eCLIP22.15■■□□□ 1.14
PSMB6-202ENST00000571309 EHBP1L1Q8N3D4 1523 aa22.15■■□□□ 1.14
PSMB6-202ENST00000571309 SPAG9O60271 1321 aaKnown RBP22.14■■□□□ 1.14
PSMB6-202ENST00000571309 TIAM1Q13009 1591 aa22.12■■□□□ 1.13
PSMB6-202ENST00000571309 C3P01024 1663 aa22.11■■□□□ 1.13
PSMB6-202ENST00000571309 SETD1BQ9UPS6 1966 aaKnown RBP22.11■■□□□ 1.13
PSMB6-202ENST00000571309 FBXO41Q8TF61 875 aa22.11■■□□□ 1.13
PSMB6-202ENST00000571309 INO80Q9ULG1 1556 aaPredicted RBP22.11■■□□□ 1.13
PSMB6-202ENST00000571309 ATP7AQ04656 1500 aa22.11■■□□□ 1.13
PSMB6-202ENST00000571309 CNTLNQ9NXG0 1405 aa22.08■■□□□ 1.13
PSMB6-202ENST00000571309 ESF1Q9H501 851 aaKnown RBP22.08■■□□□ 1.13
PSMB6-202ENST00000571309 UHRF1BP1Q6BDS2 1440 aa22.07■■□□□ 1.12
PSMB6-202ENST00000571309 PLXNC1O60486 1568 aa22.06■■□□□ 1.12
PSMB6-202ENST00000571309 ZNF644Q9H582 1327 aaPredicted RBP22.06■■□□□ 1.12
PSMB6-202ENST00000571309 SUPT6HQ7KZ85 1726 aaKnown RBP22.05■■□□□ 1.12
PSMB6-202ENST00000571309 A2MP01023 1474 aa22.04■■□□□ 1.12
PSMB6-202ENST00000571309 MBD5Q9P267 1494 aa22.04■■□□□ 1.12
PSMB6-202ENST00000571309 MROH2AA6NES4 1674 aa22.03■■□□□ 1.12
PSMB6-202ENST00000571309 STRCQ7RTU9 1775 aa22.01■■□□□ 1.11
PSMB6-202ENST00000571309 NCOA2Q15596 1464 aa22.01■■□□□ 1.11
PSMB6-202ENST00000571309 LOC105371045A0A1W2PR82 267 aa22■■□□□ 1.11
PSMB6-202ENST00000571309 ADGBQ8N7X0 1667 aa22■■□□□ 1.11
PSMB6-202ENST00000571309 RTEL1-TNFRSF6BF6WH68 1400 aa21.98■■□□□ 1.11
PSMB6-202ENST00000571309 NPATQ14207 1427 aa21.97■■□□□ 1.11
PSMB6-202ENST00000571309 VPS8Q8N3P4 1428 aa21.97■■□□□ 1.11
PSMB6-202ENST00000571309 ZMYM3Q14202 1370 aa21.97■■□□□ 1.11
PSMB6-202ENST00000571309 DMRT2Q9Y5R5 561 aa21.96■■□□□ 1.11
PSMB6-202ENST00000571309 CLTCQ00610 1675 aaKnown RBP21.95■■□□□ 1.1
PSMB6-202ENST00000571309 CAMSAP2Q08AD1 1489 aa21.94■■□□□ 1.1
PSMB6-202ENST00000571309 CCDC141Q6ZP82 1450 aa21.93■■□□□ 1.1
PSMB6-202ENST00000571309 CERKQ8TCT0 537 aa21.93■■□□□ 1.1
PSMB6-202ENST00000571309 LRRC9Q6ZRR7 1453 aa21.92■■□□□ 1.1
PSMB6-202ENST00000571309 PPP6R1Q9UPN7 881 aa21.92■■□□□ 1.1
PSMB6-202ENST00000571309 DHX29Q7Z478 1369 aaKnown RBP21.91■■□□□ 1.1
PSMB6-202ENST00000571309 RSPH4AQ5TD94 716 aa21.91■■□□□ 1.1
PSMB6-202ENST00000571309 GGT6Q6P531 493 aa21.91■■□□□ 1.1
PSMB6-202ENST00000571309 MAP3K1Q13233 1512 aa21.9■■□□□ 1.1
PSMB6-202ENST00000571309 PTPRTO14522 1441 aa21.89■■□□□ 1.1
PSMB6-202ENST00000571309 ARHGEF5Q12774 1597 aa21.88■■□□□ 1.09
PSMB6-202ENST00000571309 PTPRKQ15262 1439 aa21.88■■□□□ 1.09
PSMB6-202ENST00000571309 NCOA1Q15788 1441 aa21.88■■□□□ 1.09
PSMB6-202ENST00000571309 CAMSAP1Q5T5Y3 1602 aa21.84■■□□□ 1.09
PSMB6-202ENST00000571309 MYO3AQ8NEV4 1616 aa21.84■■□□□ 1.09
PSMB6-202ENST00000571309 ZNF142P52746 1687 aaPredicted RBP21.83■■□□□ 1.09
PSMB6-202ENST00000571309 KANK4Q5T7N3 995 aaPredicted RBP21.83■■□□□ 1.09
PSMB6-202ENST00000571309 KIF3BO15066 747 aa21.81■■□□□ 1.08
PSMB6-202ENST00000571309 FAM135AQ9P2D6 1515 aa21.8■■□□□ 1.08
PSMB6-202ENST00000571309 CEP170BQ9Y4F5 1589 aaPredicted RBP21.8■■□□□ 1.08
PSMB6-202ENST00000571309 TSPY4P0CV99 314 aa21.8■■□□□ 1.08
PSMB6-202ENST00000571309 TSPY10P0CW01 314 aa21.8■■□□□ 1.08
PSMB6-202ENST00000571309 MIA2Q96PC5 1412 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms