RNA–Protein interactions for RNA: ENST00000571058.5

RPA1-203, Transcript of replication protein A1, humanhuman

TSL 4

Gene RPA1, Length 577 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-203ENST00000571058 ARHGAP5Q13017 1502 aa27.71■■■□□ 2.03
RPA1-203ENST00000571058 ARHGEF40Q8TER5 1519 aa27.71■■■□□ 2.03
RPA1-203ENST00000571058 POGZQ7Z3K3 1410 aa27.69■■■□□ 2.02
RPA1-203ENST00000571058 PREX2Q70Z35 1606 aa27.66■■■□□ 2.02
RPA1-203ENST00000571058 CDC42BPBQ9Y5S2 1711 aa27.64■■■□□ 2.02
RPA1-203ENST00000571058 ZFYVE16Q7Z3T8 1539 aa27.64■■■□□ 2.02
RPA1-203ENST00000571058 ZNF518AQ6AHZ1 1483 aa27.63■■■□□ 2.01
RPA1-203ENST00000571058 ARID4BQ4LE39 1312 aaPredicted RBP27.6■■■□□ 2.01
RPA1-203ENST00000571058 MTUS2Q5JR59 1369 aa27.59■■■□□ 2.01
RPA1-203ENST00000571058 ADAMTSL3P82987 1691 aa27.59■■■□□ 2.01
RPA1-203ENST00000571058 CDC42BPAQ5VT25 1732 aa27.58■■■□□ 2.01
RPA1-203ENST00000571058 BCORL1Q5H9F3 1711 aa27.57■■■□□ 2
RPA1-203ENST00000571058 LOC105371045A0A1W2PR82 267 aa27.56■■■□□ 2
RPA1-203ENST00000571058 YEATS2Q9ULM3 1422 aa27.56■■■□□ 2
RPA1-203ENST00000571058 KDM5CP41229 1560 aa27.56■■■□□ 2
RPA1-203ENST00000571058 ABCC1P33527 1531 aa27.53■■■□□ 2
RPA1-203ENST00000571058 EHBP1L1Q8N3D4 1523 aa27.51■■■□□ 2
RPA1-203ENST00000571058 GPATCH8Q9UKJ3 1502 aaKnown RBP27.51■■■□□ 2
RPA1-203ENST00000571058 ATP10AO60312 1499 aa27.51■■■□□ 2
RPA1-203ENST00000571058 AFAP1Q8N556 730 aa27.5■■□□□ 1.99
RPA1-203ENST00000571058 CCNB3Q8WWL7 1395 aa27.49■■□□□ 1.99
RPA1-203ENST00000571058 HECW2Q9P2P5 1572 aa27.48■■□□□ 1.99
RPA1-203ENST00000571058 ITSN2Q9NZM3 1697 aa27.48■■□□□ 1.99
RPA1-203ENST00000571058 C9orf84Q5VXU9 1444 aa27.48■■□□□ 1.99
RPA1-203ENST00000571058 MLH3Q9UHC1 1453 aa27.47■■□□□ 1.99
RPA1-203ENST00000571058 VPS8Q8N3P4 1428 aa27.47■■□□□ 1.99
RPA1-203ENST00000571058 PTPRMP28827 1452 aa27.46■■□□□ 1.99
RPA1-203ENST00000571058 CFDP1Q9UEE9 299 aaPredicted RBP27.45■■□□□ 1.98
RPA1-203ENST00000571058 MADDQ8WXG6 1647 aa27.45■■□□□ 1.98
RPA1-203ENST00000571058 PLEKHH2Q8IVE3 1493 aa27.44■■□□□ 1.98
RPA1-203ENST00000571058 ARHGEF12Q9NZN5 1544 aa27.44■■□□□ 1.98
RPA1-203ENST00000571058 SAMD9LQ8IVG5 1584 aa27.43■■□□□ 1.98
RPA1-203ENST00000571058 TRAPPC8Q9Y2L5 1435 aa27.42■■□□□ 1.98
RPA1-203ENST00000571058 MYT1LQ9UL68 1186 aa27.42■■□□□ 1.98
RPA1-203ENST00000571058 KIAA1107Q9UPP5 1409 aa27.41■■□□□ 1.98
RPA1-203ENST00000571058 ZNF777Q9ULD5 760 aaPredicted RBP27.41■■□□□ 1.98
RPA1-203ENST00000571058 SIGLEC1Q9BZZ2 1709 aa27.41■■□□□ 1.98
RPA1-203ENST00000571058 TIAM1Q13009 1591 aa27.39■■□□□ 1.98
RPA1-203ENST00000571058 REREQ9P2R6 1566 aa27.39■■□□□ 1.98
RPA1-203ENST00000571058 DIP2CQ9Y2E4 1556 aa27.39■■□□□ 1.97
RPA1-203ENST00000571058 SYCP2Q9BX26 1530 aa27.37■■□□□ 1.97
RPA1-203ENST00000571058 RIMS1Q86UR5 1692 aaKnown RBP27.36■■□□□ 1.97
RPA1-203ENST00000571058 SUPT6HQ7KZ85 1726 aaKnown RBP27.36■■□□□ 1.97
RPA1-203ENST00000571058 MAP3K1Q13233 1512 aa27.35■■□□□ 1.97
RPA1-203ENST00000571058 ABCA6Q8N139 1617 aa27.34■■□□□ 1.97
RPA1-203ENST00000571058 KIDINS220Q9ULH0 1771 aa27.32■■□□□ 1.96
RPA1-203ENST00000571058 FER1L4A9Z1Z3 1794 aa27.32■■□□□ 1.96
RPA1-203ENST00000571058 NCOA2Q15596 1464 aa27.32■■□□□ 1.96
RPA1-203ENST00000571058 HNRNPMP52272 730 aaKnown RBP eCLIP27.31■■□□□ 1.96
RPA1-203ENST00000571058 MLECQ14165 292 aa27.31■■□□□ 1.96
RPA1-203ENST00000571058 SPAG9O60271 1321 aaKnown RBP27.3■■□□□ 1.96
RPA1-203ENST00000571058 AGLP35573 1532 aa27.3■■□□□ 1.96
RPA1-203ENST00000571058 LRRC9Q6ZRR7 1453 aa27.28■■□□□ 1.96
RPA1-203ENST00000571058 ATP7AQ04656 1500 aa27.25■■□□□ 1.95
RPA1-203ENST00000571058 INO80Q9ULG1 1556 aaPredicted RBP27.23■■□□□ 1.95
RPA1-203ENST00000571058 MBD5Q9P267 1494 aa27.21■■□□□ 1.95
RPA1-203ENST00000571058 ZNF644Q9H582 1327 aaPredicted RBP27.2■■□□□ 1.95
RPA1-203ENST00000571058 RSPH4AQ5TD94 716 aa27.2■■□□□ 1.94
RPA1-203ENST00000571058 APLP2Q06481 763 aa27.18■■□□□ 1.94
RPA1-203ENST00000571058 RTEL1-TNFRSF6BF6WH68 1400 aa27.17■■□□□ 1.94
RPA1-203ENST00000571058 CAMSAP2Q08AD1 1489 aa27.16■■□□□ 1.94
RPA1-203ENST00000571058 ESF1Q9H501 851 aaKnown RBP27.15■■□□□ 1.94
RPA1-203ENST00000571058 LMTK3Q96Q04 1460 aa27.14■■□□□ 1.94
RPA1-203ENST00000571058 A2MP01023 1474 aa27.13■■□□□ 1.93
RPA1-203ENST00000571058 CCDC141Q6ZP82 1450 aa27.13■■□□□ 1.93
RPA1-203ENST00000571058 KANK4Q5T7N3 995 aaPredicted RBP27.13■■□□□ 1.93
RPA1-203ENST00000571058 ADGBQ8N7X0 1667 aa27.13■■□□□ 1.93
RPA1-203ENST00000571058 CNTLNQ9NXG0 1405 aa27.13■■□□□ 1.93
RPA1-203ENST00000571058 PLXNC1O60486 1568 aa27.13■■□□□ 1.93
RPA1-203ENST00000571058 PLPPR3Q6T4P5 718 aa27.11■■□□□ 1.93
RPA1-203ENST00000571058 MIA2Q96PC5 1412 aa27.1■■□□□ 1.93
RPA1-203ENST00000571058 ARHGEF5Q12774 1597 aa27.09■■□□□ 1.93
RPA1-203ENST00000571058 MYOM3Q5VTT5 1437 aa27.08■■□□□ 1.93
RPA1-203ENST00000571058 SETD1BQ9UPS6 1966 aaKnown RBP27.07■■□□□ 1.92
RPA1-203ENST00000571058 PREX1Q8TCU6 1659 aa27.05■■□□□ 1.92
RPA1-203ENST00000571058 C3P01024 1663 aa27.03■■□□□ 1.92
RPA1-203ENST00000571058 TSPY4P0CV99 314 aa27.03■■□□□ 1.92
RPA1-203ENST00000571058 TSPY10P0CW01 314 aa27.03■■□□□ 1.92
RPA1-203ENST00000571058 CEBPAP49715 358 aaPredicted RBP27.03■■□□□ 1.92
RPA1-203ENST00000571058 PPP6R1Q9UPN7 881 aa27.03■■□□□ 1.92
RPA1-203ENST00000571058 MROH2AA6NES4 1674 aa27.02■■□□□ 1.92
RPA1-203ENST00000571058 DHX29Q7Z478 1369 aaKnown RBP27.02■■□□□ 1.92
RPA1-203ENST00000571058 UHRF1BP1Q6BDS2 1440 aa26.97■■□□□ 1.91
RPA1-203ENST00000571058 MAST1Q9Y2H9 1570 aa26.96■■□□□ 1.91
RPA1-203ENST00000571058 GGT6Q6P531 493 aa26.95■■□□□ 1.9
RPA1-203ENST00000571058 NPATQ14207 1427 aa26.94■■□□□ 1.9
RPA1-203ENST00000571058 HSPA2P54652 639 aa26.94■■□□□ 1.9
RPA1-203ENST00000571058 ZMYM3Q14202 1370 aa26.94■■□□□ 1.9
RPA1-203ENST00000571058 CLTCQ00610 1675 aaKnown RBP26.92■■□□□ 1.9
RPA1-203ENST00000571058 FAM135AQ9P2D6 1515 aa26.91■■□□□ 1.9
RPA1-203ENST00000571058 PTPN23Q9H3S7 1636 aa26.89■■□□□ 1.9
RPA1-203ENST00000571058 KIF3BO15066 747 aa26.88■■□□□ 1.89
RPA1-203ENST00000571058 FGD6Q6ZV73 1430 aa26.87■■□□□ 1.89
RPA1-203ENST00000571058 SHANK2Q9UPX8 1470 aa26.85■■□□□ 1.89
RPA1-203ENST00000571058 TCOF1Q13428 1488 aaKnown RBP26.84■■□□□ 1.89
RPA1-203ENST00000571058 KDM5DQ9BY66 1539 aa26.81■■□□□ 1.88
RPA1-203ENST00000571058 EIF2AK4Q9P2K8 1649 aaKnown RBP26.81■■□□□ 1.88
RPA1-203ENST00000571058 CROCC2H7BZ55 1655 aa26.81■■□□□ 1.88
RPA1-203ENST00000571058 PTPRKQ15262 1439 aa26.8■■□□□ 1.88
RPA1-203ENST00000571058 DMRT2Q9Y5R5 561 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms