RNA–Protein interactions for RNA: ENST00000571058.5

RPA1-203, Transcript of replication protein A1, humanhuman

TSL 4

Gene RPA1, Length 577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-203ENST00000571058 ARHGAP5Q13017 1502 aa27.71■■■□□ 2.03
RPA1-203ENST00000571058 ARHGEF40Q8TER5 1519 aa27.71■■■□□ 2.03
RPA1-203ENST00000571058 POGZQ7Z3K3 1410 aa27.69■■■□□ 2.02
RPA1-203ENST00000571058 PREX2Q70Z35 1606 aa27.66■■■□□ 2.02
RPA1-203ENST00000571058 CDC42BPBQ9Y5S2 1711 aa27.64■■■□□ 2.02
RPA1-203ENST00000571058 ZFYVE16Q7Z3T8 1539 aa27.64■■■□□ 2.02
RPA1-203ENST00000571058 ZNF518AQ6AHZ1 1483 aa27.63■■■□□ 2.01
RPA1-203ENST00000571058 ARID4BQ4LE39 1312 aaPredicted RBP27.6■■■□□ 2.01
RPA1-203ENST00000571058 MTUS2Q5JR59 1369 aa27.59■■■□□ 2.01
RPA1-203ENST00000571058 ADAMTSL3P82987 1691 aa27.59■■■□□ 2.01
RPA1-203ENST00000571058 CDC42BPAQ5VT25 1732 aa27.58■■■□□ 2.01
RPA1-203ENST00000571058 BCORL1Q5H9F3 1711 aa27.57■■■□□ 2
RPA1-203ENST00000571058 LOC105371045A0A1W2PR82 267 aa27.56■■■□□ 2
RPA1-203ENST00000571058 YEATS2Q9ULM3 1422 aa27.56■■■□□ 2
RPA1-203ENST00000571058 KDM5CP41229 1560 aa27.56■■■□□ 2
RPA1-203ENST00000571058 ABCC1P33527 1531 aa27.53■■■□□ 2
RPA1-203ENST00000571058 EHBP1L1Q8N3D4 1523 aa27.51■■■□□ 2
RPA1-203ENST00000571058 GPATCH8Q9UKJ3 1502 aaKnown RBP27.51■■■□□ 2
RPA1-203ENST00000571058 ATP10AO60312 1499 aa27.51■■■□□ 2
RPA1-203ENST00000571058 AFAP1Q8N556 730 aa27.5■■□□□ 1.99
RPA1-203ENST00000571058 CCNB3Q8WWL7 1395 aa27.49■■□□□ 1.99
RPA1-203ENST00000571058 HECW2Q9P2P5 1572 aa27.48■■□□□ 1.99
RPA1-203ENST00000571058 ITSN2Q9NZM3 1697 aa27.48■■□□□ 1.99
RPA1-203ENST00000571058 C9orf84Q5VXU9 1444 aa27.48■■□□□ 1.99
RPA1-203ENST00000571058 MLH3Q9UHC1 1453 aa27.47■■□□□ 1.99
RPA1-203ENST00000571058 VPS8Q8N3P4 1428 aa27.47■■□□□ 1.99
RPA1-203ENST00000571058 PTPRMP28827 1452 aa27.46■■□□□ 1.99
RPA1-203ENST00000571058 CFDP1Q9UEE9 299 aaPredicted RBP27.45■■□□□ 1.98
RPA1-203ENST00000571058 MADDQ8WXG6 1647 aa27.45■■□□□ 1.98
RPA1-203ENST00000571058 PLEKHH2Q8IVE3 1493 aa27.44■■□□□ 1.98
RPA1-203ENST00000571058 ARHGEF12Q9NZN5 1544 aa27.44■■□□□ 1.98
RPA1-203ENST00000571058 SAMD9LQ8IVG5 1584 aa27.43■■□□□ 1.98
RPA1-203ENST00000571058 TRAPPC8Q9Y2L5 1435 aa27.42■■□□□ 1.98
RPA1-203ENST00000571058 MYT1LQ9UL68 1186 aa27.42■■□□□ 1.98
RPA1-203ENST00000571058 KIAA1107Q9UPP5 1409 aa27.41■■□□□ 1.98
RPA1-203ENST00000571058 ZNF777Q9ULD5 760 aaPredicted RBP27.41■■□□□ 1.98
RPA1-203ENST00000571058 SIGLEC1Q9BZZ2 1709 aa27.41■■□□□ 1.98
RPA1-203ENST00000571058 TIAM1Q13009 1591 aa27.39■■□□□ 1.98
RPA1-203ENST00000571058 REREQ9P2R6 1566 aa27.39■■□□□ 1.98
RPA1-203ENST00000571058 DIP2CQ9Y2E4 1556 aa27.39■■□□□ 1.97
RPA1-203ENST00000571058 SYCP2Q9BX26 1530 aa27.37■■□□□ 1.97
RPA1-203ENST00000571058 RIMS1Q86UR5 1692 aaKnown RBP27.36■■□□□ 1.97
RPA1-203ENST00000571058 SUPT6HQ7KZ85 1726 aaKnown RBP27.36■■□□□ 1.97
RPA1-203ENST00000571058 MAP3K1Q13233 1512 aa27.35■■□□□ 1.97
RPA1-203ENST00000571058 ABCA6Q8N139 1617 aa27.34■■□□□ 1.97
RPA1-203ENST00000571058 KIDINS220Q9ULH0 1771 aa27.32■■□□□ 1.96
RPA1-203ENST00000571058 FER1L4A9Z1Z3 1794 aa27.32■■□□□ 1.96
RPA1-203ENST00000571058 NCOA2Q15596 1464 aa27.32■■□□□ 1.96
RPA1-203ENST00000571058 HNRNPMP52272 730 aaKnown RBP eCLIP27.31■■□□□ 1.96
RPA1-203ENST00000571058 MLECQ14165 292 aa27.31■■□□□ 1.96
RPA1-203ENST00000571058 SPAG9O60271 1321 aaKnown RBP27.3■■□□□ 1.96
RPA1-203ENST00000571058 AGLP35573 1532 aa27.3■■□□□ 1.96
RPA1-203ENST00000571058 LRRC9Q6ZRR7 1453 aa27.28■■□□□ 1.96
RPA1-203ENST00000571058 ATP7AQ04656 1500 aa27.25■■□□□ 1.95
RPA1-203ENST00000571058 INO80Q9ULG1 1556 aaPredicted RBP27.23■■□□□ 1.95
RPA1-203ENST00000571058 MBD5Q9P267 1494 aa27.21■■□□□ 1.95
RPA1-203ENST00000571058 ZNF644Q9H582 1327 aaPredicted RBP27.2■■□□□ 1.95
RPA1-203ENST00000571058 RSPH4AQ5TD94 716 aa27.2■■□□□ 1.94
RPA1-203ENST00000571058 APLP2Q06481 763 aa27.18■■□□□ 1.94
RPA1-203ENST00000571058 RTEL1-TNFRSF6BF6WH68 1400 aa27.17■■□□□ 1.94
RPA1-203ENST00000571058 CAMSAP2Q08AD1 1489 aa27.16■■□□□ 1.94
RPA1-203ENST00000571058 ESF1Q9H501 851 aaKnown RBP27.15■■□□□ 1.94
RPA1-203ENST00000571058 LMTK3Q96Q04 1460 aa27.14■■□□□ 1.94
RPA1-203ENST00000571058 A2MP01023 1474 aa27.13■■□□□ 1.93
RPA1-203ENST00000571058 CCDC141Q6ZP82 1450 aa27.13■■□□□ 1.93
RPA1-203ENST00000571058 KANK4Q5T7N3 995 aaPredicted RBP27.13■■□□□ 1.93
RPA1-203ENST00000571058 ADGBQ8N7X0 1667 aa27.13■■□□□ 1.93
RPA1-203ENST00000571058 CNTLNQ9NXG0 1405 aa27.13■■□□□ 1.93
RPA1-203ENST00000571058 PLXNC1O60486 1568 aa27.13■■□□□ 1.93
RPA1-203ENST00000571058 PLPPR3Q6T4P5 718 aa27.11■■□□□ 1.93
RPA1-203ENST00000571058 MIA2Q96PC5 1412 aa27.1■■□□□ 1.93
RPA1-203ENST00000571058 ARHGEF5Q12774 1597 aa27.09■■□□□ 1.93
RPA1-203ENST00000571058 MYOM3Q5VTT5 1437 aa27.08■■□□□ 1.93
RPA1-203ENST00000571058 SETD1BQ9UPS6 1966 aaKnown RBP27.07■■□□□ 1.92
RPA1-203ENST00000571058 PREX1Q8TCU6 1659 aa27.05■■□□□ 1.92
RPA1-203ENST00000571058 C3P01024 1663 aa27.03■■□□□ 1.92
RPA1-203ENST00000571058 TSPY4P0CV99 314 aa27.03■■□□□ 1.92
RPA1-203ENST00000571058 TSPY10P0CW01 314 aa27.03■■□□□ 1.92
RPA1-203ENST00000571058 CEBPAP49715 358 aaPredicted RBP27.03■■□□□ 1.92
RPA1-203ENST00000571058 PPP6R1Q9UPN7 881 aa27.03■■□□□ 1.92
RPA1-203ENST00000571058 MROH2AA6NES4 1674 aa27.02■■□□□ 1.92
RPA1-203ENST00000571058 DHX29Q7Z478 1369 aaKnown RBP27.02■■□□□ 1.92
RPA1-203ENST00000571058 UHRF1BP1Q6BDS2 1440 aa26.97■■□□□ 1.91
RPA1-203ENST00000571058 MAST1Q9Y2H9 1570 aa26.96■■□□□ 1.91
RPA1-203ENST00000571058 GGT6Q6P531 493 aa26.95■■□□□ 1.9
RPA1-203ENST00000571058 NPATQ14207 1427 aa26.94■■□□□ 1.9
RPA1-203ENST00000571058 HSPA2P54652 639 aa26.94■■□□□ 1.9
RPA1-203ENST00000571058 ZMYM3Q14202 1370 aa26.94■■□□□ 1.9
RPA1-203ENST00000571058 CLTCQ00610 1675 aaKnown RBP26.92■■□□□ 1.9
RPA1-203ENST00000571058 FAM135AQ9P2D6 1515 aa26.91■■□□□ 1.9
RPA1-203ENST00000571058 PTPN23Q9H3S7 1636 aa26.89■■□□□ 1.9
RPA1-203ENST00000571058 KIF3BO15066 747 aa26.88■■□□□ 1.89
RPA1-203ENST00000571058 FGD6Q6ZV73 1430 aa26.87■■□□□ 1.89
RPA1-203ENST00000571058 SHANK2Q9UPX8 1470 aa26.85■■□□□ 1.89
RPA1-203ENST00000571058 TCOF1Q13428 1488 aaKnown RBP26.84■■□□□ 1.89
RPA1-203ENST00000571058 KDM5DQ9BY66 1539 aa26.81■■□□□ 1.88
RPA1-203ENST00000571058 EIF2AK4Q9P2K8 1649 aaKnown RBP26.81■■□□□ 1.88
RPA1-203ENST00000571058 CROCC2H7BZ55 1655 aa26.81■■□□□ 1.88
RPA1-203ENST00000571058 PTPRKQ15262 1439 aa26.8■■□□□ 1.88
RPA1-203ENST00000571058 DMRT2Q9Y5R5 561 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms