RNA–Protein interactions for RNA: ENST00000570818.5

CDC27-212, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-212ENST00000570818 TMEM92Q6UXU6 159 aa15.87■□□□□ 0.13
CDC27-212ENST00000570818 C2orf72A6NCS6 295 aa15.85■□□□□ 0.13
CDC27-212ENST00000570818 PDE4AP27815 886 aa15.85■□□□□ 0.13
CDC27-212ENST00000570818 PLCB2Q00722 1185 aa15.85■□□□□ 0.13
CDC27-212ENST00000570818 GPHNQ9NQX3 736 aaPredicted RBP15.83■□□□□ 0.12
CDC27-212ENST00000570818 KIF3CO14782 793 aa15.82■□□□□ 0.12
CDC27-212ENST00000570818 DOK7Q18PE1 504 aa15.79■□□□□ 0.12
CDC27-212ENST00000570818 CRISPLD2Q9H0B8 497 aa15.78■□□□□ 0.12
CDC27-212ENST00000570818 RIMBP2O15034 1052 aa15.77■□□□□ 0.12
CDC27-212ENST00000570818 FOXK1P85037 733 aa15.76■□□□□ 0.11
CDC27-212ENST00000570818 ZNF710Q8N1W2 664 aa15.74■□□□□ 0.11
CDC27-212ENST00000570818 LARP6Q9BRS8 491 aaKnown RBP15.74■□□□□ 0.11
CDC27-212ENST00000570818 NCKAP5LQ9HCH0 1330 aa15.73■□□□□ 0.11
CDC27-212ENST00000570818 CADPS2Q86UW7 1296 aa15.73■□□□□ 0.11
CDC27-212ENST00000570818 FAM163AQ96GL9 167 aaPredicted RBP15.73■□□□□ 0.11
CDC27-212ENST00000570818 DDX27Q96GQ7 796 aaKnown RBP15.72■□□□□ 0.11
CDC27-212ENST00000570818 DSG2Q14126 1118 aa15.7■□□□□ 0.1
CDC27-212ENST00000570818 PLPP6Q8IY26 295 aa15.7■□□□□ 0.1
CDC27-212ENST00000570818 PPP1R15BQ5SWA1 713 aa15.69■□□□□ 0.1
CDC27-212ENST00000570818 HOXB3P14651 431 aaPredicted RBP15.66■□□□□ 0.1
CDC27-212ENST00000570818 ZSWIM6Q9HCJ5 1215 aa15.66■□□□□ 0.1
CDC27-212ENST00000570818 TSHZ2Q9NRE2 1034 aa15.66■□□□□ 0.1
CDC27-212ENST00000570818 WDR70Q9NW82 654 aa15.66■□□□□ 0.1
CDC27-212ENST00000570818 MFSD10Q14728 455 aa15.65■□□□□ 0.1
CDC27-212ENST00000570818 HAP1P54257 671 aaPredicted RBP15.64■□□□□ 0.09
CDC27-212ENST00000570818 ST18O60284 1047 aa15.62■□□□□ 0.09
CDC27-212ENST00000570818 SLC34A2O95436 690 aa15.62■□□□□ 0.09
CDC27-212ENST00000570818 TBC1D12O60347 775 aa15.58■□□□□ 0.08
CDC27-212ENST00000570818 HOXB1P14653 301 aaPredicted RBP15.55■□□□□ 0.08
CDC27-212ENST00000570818 PTCD2Q8WV60 388 aaKnown RBP15.54■□□□□ 0.08
CDC27-212ENST00000570818 PCDHGA4Q9Y5G9 962 aa15.52■□□□□ 0.08
CDC27-212ENST00000570818 ARSIQ5FYB1 569 aa15.5■□□□□ 0.07
CDC27-212ENST00000570818 GPR153Q6NV75 609 aa15.5■□□□□ 0.07
CDC27-212ENST00000570818 EMP3P54852 163 aa15.49■□□□□ 0.07
CDC27-212ENST00000570818 LCE2DQ5TA82 110 aaPredicted RBP15.49■□□□□ 0.07
CDC27-212ENST00000570818 UPF1Q92900 1129 aaKnown RBP eCLIP15.48■□□□□ 0.07
CDC27-212ENST00000570818 E2F4Q16254 413 aa15.47■□□□□ 0.07
CDC27-212ENST00000570818 ZNF316A6NFI3 1004 aaPredicted RBP15.46■□□□□ 0.07
CDC27-212ENST00000570818 OXER1Q8TDS5 423 aa15.46■□□□□ 0.07
CDC27-212ENST00000570818 CAMK2BQ13554 666 aa15.45■□□□□ 0.06
CDC27-212ENST00000570818 MAP3K9P80192 1104 aa15.44■□□□□ 0.06
CDC27-212ENST00000570818 MARVELD3Q96A59 401 aa15.44■□□□□ 0.06
CDC27-212ENST00000570818 POTEMA6NI47 508 aa15.42■□□□□ 0.06
CDC27-212ENST00000570818 POTEGQ6S5H5 508 aa15.42■□□□□ 0.06
CDC27-212ENST00000570818 NUDT7P0C024 238 aa15.41■□□□□ 0.06
CDC27-212ENST00000570818 VSIG10Q8N0Z9 540 aa15.4■□□□□ 0.06
CDC27-212ENST00000570818 ERBB3P21860 1342 aa15.4■□□□□ 0.06
CDC27-212ENST00000570818 KHSRPQ92945 711 aaKnown RBP eCLIP15.39■□□□□ 0.051e-7■■□□□ 12.7
CDC27-212ENST00000570818 EMILIN3Q9NT22 766 aa15.39■□□□□ 0.05
CDC27-212ENST00000570818 P3H3Q8IVL6 736 aa15.37■□□□□ 0.05
CDC27-212ENST00000570818 FAM205CA6NFA0 338 aa15.35■□□□□ 0.05
CDC27-212ENST00000570818 PSDA5PKW4 1024 aaPredicted RBP15.34■□□□□ 0.05
CDC27-212ENST00000570818 DPYSL4O14531 572 aa15.32■□□□□ 0.04
CDC27-212ENST00000570818 EVI5O60447 810 aa15.32■□□□□ 0.04
CDC27-212ENST00000570818 HS3ST6Q96QI5 342 aa15.3■□□□□ 0.04
CDC27-212ENST00000570818 LHX6Q9UPM6 363 aa15.3■□□□□ 0.04
CDC27-212ENST00000570818 ARIH1Q9Y4X5 557 aaPredicted RBP15.3■□□□□ 0.04
CDC27-212ENST00000570818 VARS2Q5ST30 1063 aaKnown RBP15.29■□□□□ 0.04
CDC27-212ENST00000570818 KDM4FA0A1W2PPD8 638 aa15.28■□□□□ 0.04
CDC27-212ENST00000570818 SPDYE16A6NNV3 312 aaPredicted RBP15.27■□□□□ 0.04
CDC27-212ENST00000570818 ARHGEF1Q92888 912 aaKnown RBP15.26■□□□□ 0.03
CDC27-212ENST00000570818 ANO8Q9HCE9 1232 aaPredicted RBP15.26■□□□□ 0.03
CDC27-212ENST00000570818 KDM2AQ9Y2K7 1162 aa15.26■□□□□ 0.03
CDC27-212ENST00000570818 PCDH10Q9P2E7 1040 aa15.25■□□□□ 0.03
CDC27-212ENST00000570818 KCNV2Q8TDN2 545 aa15.24■□□□□ 0.03
CDC27-212ENST00000570818 PDIA6Q15084 440 aa15.22■□□□□ 0.03
CDC27-212ENST00000570818 PPP4R3BQ5MIZ7 849 aa15.22■□□□□ 0.03
CDC27-212ENST00000570818 CDAN1Q8IWY9 1227 aa15.19■□□□□ 0.02
CDC27-212ENST00000570818 ZNF687Q8N1G0 1237 aa15.18■□□□□ 0.02
CDC27-212ENST00000570818 ZNF454Q8N9F8 522 aa15.18■□□□□ 0.02
CDC27-212ENST00000570818 JPH4Q96JJ6 628 aa15.17■□□□□ 0.02
CDC27-212ENST00000570818 POTEB3A0JP26 581 aa15.14■□□□□ 0.01
CDC27-212ENST00000570818 POTEBQ6S5H4 581 aa15.14■□□□□ 0.01
CDC27-212ENST00000570818 KCNH8Q96L42 1107 aa15.14■□□□□ 0.01
CDC27-212ENST00000570818 PTGER2P43116 358 aa15.13■□□□□ 0.01
CDC27-212ENST00000570818 FOSBP53539 338 aa15.13■□□□□ 0.01
CDC27-212ENST00000570818 SLC24A1O60721 1099 aa15.12■□□□□ 0.01
CDC27-212ENST00000570818 PHF14O94880 888 aa15.12■□□□□ 0.01
CDC27-212ENST00000570818 PBX2P40425 430 aa15.12■□□□□ 0.01
CDC27-212ENST00000570818 FBXW7Q969H0 707 aa15.1■□□□□ 0.01
CDC27-212ENST00000570818 ZDHHC16Q969W1 377 aa15.1■□□□□ 0.01
CDC27-212ENST00000570818 EPAS1Q99814 870 aa15.1■□□□□ 0.01
CDC27-212ENST00000570818 TYW1BQ6NUM6 668 aa15.09■□□□□ 0.01
CDC27-212ENST00000570818 DDX12PQ92771 950 aa15.09■□□□□ 0.01
CDC27-212ENST00000570818 PCDHGA10Q9Y5H3 936 aa15.07■□□□□ 0
CDC27-212ENST00000570818 GRXCR2A6NFK2 248 aa15.04■□□□□ -0
CDC27-212ENST00000570818 ARHGAP33O14559 1287 aa15.04■□□□□ -0
CDC27-212ENST00000570818 BCL2L12Q9HB09 334 aa15.04■□□□□ -0
CDC27-212ENST00000570818 NBR1Q14596 966 aa15.03■□□□□ -0
CDC27-212ENST00000570818 PTPREP23469 700 aa15.02■□□□□ -0
CDC27-212ENST00000570818 KCNK17Q96T54 332 aa14.99□□□□□ -0.01
CDC27-212ENST00000570818 ADAM33Q9BZ11 813 aa14.98□□□□□ -0.01
CDC27-212ENST00000570818 SMYD5Q6GMV2 418 aa14.97□□□□□ -0.01
CDC27-212ENST00000570818 KRTAP3-3Q9BYR6 98 aa14.97□□□□□ -0.01
CDC27-212ENST00000570818 KRTAP3-2Q9BYR7 98 aa14.97□□□□□ -0.01
CDC27-212ENST00000570818 AXIN2Q9Y2T1 843 aa14.97□□□□□ -0.01
CDC27-212ENST00000570818 LSM11P83369 360 aaKnown RBP eCLIP14.96□□□□□ -0.01
CDC27-212ENST00000570818 MAP3K7O43318 606 aa14.95□□□□□ -0.02
CDC27-212ENST00000570818 EN1Q05925 392 aaPredicted RBP14.95□□□□□ -0.02
CDC27-212ENST00000570818 RBM33Q96EV2 1170 aaKnown RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms