RNA–Protein interactions for RNA: ENST00000569983.5

PKD1-237, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 722 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-237ENST00000569983 ARHGEF40Q8TER5 1519 aa32.41■■■□□ 2.78
PKD1-237ENST00000569983 POGZQ7Z3K3 1410 aa32.4■■■□□ 2.78
PKD1-237ENST00000569983 LOC105371045A0A1W2PR82 267 aa32.37■■■□□ 2.77
PKD1-237ENST00000569983 MAGI2Q86UL8 1455 aa32.35■■■□□ 2.77
PKD1-237ENST00000569983 PREX2Q70Z35 1606 aa32.34■■■□□ 2.77
PKD1-237ENST00000569983 ARID4BQ4LE39 1312 aaPredicted RBP32.34■■■□□ 2.77
PKD1-237ENST00000569983 ZFYVE16Q7Z3T8 1539 aa32.34■■■□□ 2.77
PKD1-237ENST00000569983 CDC42BPBQ9Y5S2 1711 aa32.34■■■□□ 2.77
PKD1-237ENST00000569983 YEATS2Q9ULM3 1422 aa32.31■■■□□ 2.76
PKD1-237ENST00000569983 ZNF518AQ6AHZ1 1483 aa32.28■■■□□ 2.76
PKD1-237ENST00000569983 MTUS2Q5JR59 1369 aa32.27■■■□□ 2.76
PKD1-237ENST00000569983 CDC42BPAQ5VT25 1732 aa32.26■■■□□ 2.76
PKD1-237ENST00000569983 ADAMTSL3P82987 1691 aa32.26■■■□□ 2.75
PKD1-237ENST00000569983 BCORL1Q5H9F3 1711 aa32.25■■■□□ 2.75
PKD1-237ENST00000569983 AFAP1Q8N556 730 aa32.22■■■□□ 2.75
PKD1-237ENST00000569983 ABCC1P33527 1531 aa32.21■■■□□ 2.75
PKD1-237ENST00000569983 KDM5CP41229 1560 aa32.2■■■□□ 2.75
PKD1-237ENST00000569983 GPATCH8Q9UKJ3 1502 aaKnown RBP32.2■■■□□ 2.74
PKD1-237ENST00000569983 ATP10AO60312 1499 aa32.16■■■□□ 2.74
PKD1-237ENST00000569983 EHBP1L1Q8N3D4 1523 aa32.16■■■□□ 2.74
PKD1-237ENST00000569983 ARHGEF12Q9NZN5 1544 aa32.16■■■□□ 2.74
PKD1-237ENST00000569983 MYT1LQ9UL68 1186 aa32.16■■■□□ 2.74
PKD1-237ENST00000569983 ZNF777Q9ULD5 760 aaPredicted RBP32.16■■■□□ 2.74
PKD1-237ENST00000569983 CCNB3Q8WWL7 1395 aa32.16■■■□□ 2.74
PKD1-237ENST00000569983 PTPRMP28827 1452 aa32.16■■■□□ 2.74
PKD1-237ENST00000569983 MADDQ8WXG6 1647 aa32.15■■■□□ 2.74
PKD1-237ENST00000569983 ITSN2Q9NZM3 1697 aa32.15■■■□□ 2.74
PKD1-237ENST00000569983 SIGLEC1Q9BZZ2 1709 aa32.14■■■□□ 2.74
PKD1-237ENST00000569983 C9orf84Q5VXU9 1444 aa32.14■■■□□ 2.74
PKD1-237ENST00000569983 TRAPPC8Q9Y2L5 1435 aa32.14■■■□□ 2.74
PKD1-237ENST00000569983 HECW2Q9P2P5 1572 aa32.14■■■□□ 2.74
PKD1-237ENST00000569983 VPS8Q8N3P4 1428 aa32.13■■■□□ 2.73
PKD1-237ENST00000569983 CFDP1Q9UEE9 299 aaPredicted RBP32.11■■■□□ 2.73
PKD1-237ENST00000569983 SAMD9LQ8IVG5 1584 aa32.11■■■□□ 2.73
PKD1-237ENST00000569983 MLH3Q9UHC1 1453 aa32.1■■■□□ 2.73
PKD1-237ENST00000569983 MLECQ14165 292 aa32.07■■■□□ 2.72
PKD1-237ENST00000569983 SYCP2Q9BX26 1530 aa32.05■■■□□ 2.72
PKD1-237ENST00000569983 RIMS1Q86UR5 1692 aaKnown RBP32.05■■■□□ 2.72
PKD1-237ENST00000569983 TIAM1Q13009 1591 aa32.05■■■□□ 2.72
PKD1-237ENST00000569983 DIP2CQ9Y2E4 1556 aa32.05■■■□□ 2.72
PKD1-237ENST00000569983 PLEKHH2Q8IVE3 1493 aa32.03■■■□□ 2.72
PKD1-237ENST00000569983 ABCA6Q8N139 1617 aa32.02■■■□□ 2.72
PKD1-237ENST00000569983 KIAA1107Q9UPP5 1409 aa32.01■■■□□ 2.72
PKD1-237ENST00000569983 HNRNPMP52272 730 aaKnown RBP eCLIP32.01■■■□□ 2.71
PKD1-237ENST00000569983 REREQ9P2R6 1566 aa31.98■■■□□ 2.71
PKD1-237ENST00000569983 SUPT6HQ7KZ85 1726 aaKnown RBP31.98■■■□□ 2.71
PKD1-237ENST00000569983 KIDINS220Q9ULH0 1771 aa31.97■■■□□ 2.71
PKD1-237ENST00000569983 NCOA2Q15596 1464 aa31.97■■■□□ 2.71
PKD1-237ENST00000569983 FER1L4A9Z1Z3 1794 aa31.96■■■□□ 2.71
PKD1-237ENST00000569983 SPAG9O60271 1321 aaKnown RBP31.95■■■□□ 2.7
PKD1-237ENST00000569983 LRRC9Q6ZRR7 1453 aa31.92■■■□□ 2.7
PKD1-237ENST00000569983 ZNF644Q9H582 1327 aaPredicted RBP31.92■■■□□ 2.7
PKD1-237ENST00000569983 PLPPR3Q6T4P5 718 aa31.91■■■□□ 2.7
PKD1-237ENST00000569983 MAP3K1Q13233 1512 aa31.9■■■□□ 2.7
PKD1-237ENST00000569983 AGLP35573 1532 aa31.89■■■□□ 2.7
PKD1-237ENST00000569983 ATP7AQ04656 1500 aa31.87■■■□□ 2.69
PKD1-237ENST00000569983 INO80Q9ULG1 1556 aaPredicted RBP31.85■■■□□ 2.69
PKD1-237ENST00000569983 MBD5Q9P267 1494 aa31.84■■■□□ 2.69
PKD1-237ENST00000569983 KANK4Q5T7N3 995 aaPredicted RBP31.82■■■□□ 2.68
PKD1-237ENST00000569983 CAMSAP2Q08AD1 1489 aa31.8■■■□□ 2.68
PKD1-237ENST00000569983 LMTK3Q96Q04 1460 aa31.78■■■□□ 2.68
PKD1-237ENST00000569983 APLP2Q06481 763 aa31.78■■■□□ 2.68
PKD1-237ENST00000569983 ESF1Q9H501 851 aaKnown RBP31.75■■■□□ 2.67
PKD1-237ENST00000569983 A2MP01023 1474 aa31.75■■■□□ 2.67
PKD1-237ENST00000569983 CCDC141Q6ZP82 1450 aa31.74■■■□□ 2.67
PKD1-237ENST00000569983 CEBPAP49715 358 aaPredicted RBP31.73■■■□□ 2.67
PKD1-237ENST00000569983 RSPH4AQ5TD94 716 aa31.72■■■□□ 2.67
PKD1-237ENST00000569983 RTEL1-TNFRSF6BF6WH68 1400 aa31.72■■■□□ 2.67
PKD1-237ENST00000569983 PLXNC1O60486 1568 aa31.72■■■□□ 2.67
PKD1-237ENST00000569983 ADGBQ8N7X0 1667 aa31.7■■■□□ 2.66
PKD1-237ENST00000569983 MYOM3Q5VTT5 1437 aa31.66■■■□□ 2.66
PKD1-237ENST00000569983 CNTLNQ9NXG0 1405 aa31.66■■■□□ 2.66
PKD1-237ENST00000569983 ARHGEF5Q12774 1597 aa31.66■■■□□ 2.66
PKD1-237ENST00000569983 MIA2Q96PC5 1412 aa31.64■■■□□ 2.66
PKD1-237ENST00000569983 HSPA2P54652 639 aa31.63■■■□□ 2.65
PKD1-237ENST00000569983 C3P01024 1663 aa31.63■■■□□ 2.65
PKD1-237ENST00000569983 PREX1Q8TCU6 1659 aa31.61■■■□□ 2.65
PKD1-237ENST00000569983 TSPY4P0CV99 314 aa31.61■■■□□ 2.65
PKD1-237ENST00000569983 TSPY10P0CW01 314 aa31.61■■■□□ 2.65
PKD1-237ENST00000569983 DHX29Q7Z478 1369 aaKnown RBP31.59■■■□□ 2.65
PKD1-237ENST00000569983 GGT6Q6P531 493 aa31.59■■■□□ 2.65
PKD1-237ENST00000569983 SETD1BQ9UPS6 1966 aaKnown RBP31.56■■■□□ 2.64
PKD1-237ENST00000569983 MROH2AA6NES4 1674 aa31.56■■■□□ 2.64
PKD1-237ENST00000569983 UHRF1BP1Q6BDS2 1440 aa31.54■■■□□ 2.64
PKD1-237ENST00000569983 ZMYM3Q14202 1370 aa31.52■■■□□ 2.64
PKD1-237ENST00000569983 CLTCQ00610 1675 aaKnown RBP31.51■■■□□ 2.64
PKD1-237ENST00000569983 PPP6R1Q9UPN7 881 aa31.51■■■□□ 2.63
PKD1-237ENST00000569983 MAST1Q9Y2H9 1570 aa31.49■■■□□ 2.63
PKD1-237ENST00000569983 KIF3BO15066 747 aa31.48■■■□□ 2.63
PKD1-237ENST00000569983 PTPN23Q9H3S7 1636 aa31.46■■■□□ 2.63
PKD1-237ENST00000569983 NPATQ14207 1427 aa31.46■■■□□ 2.63
PKD1-237ENST00000569983 FGD6Q6ZV73 1430 aa31.43■■■□□ 2.62
PKD1-237ENST00000569983 TCOF1Q13428 1488 aaKnown RBP31.38■■■□□ 2.61
PKD1-237ENST00000569983 ABCC5O15440 1437 aa31.37■■■□□ 2.61
PKD1-237ENST00000569983 FAM135AQ9P2D6 1515 aa31.36■■■□□ 2.61
PKD1-237ENST00000569983 SHANK2Q9UPX8 1470 aa31.36■■■□□ 2.61
PKD1-237ENST00000569983 PTPRKQ15262 1439 aa31.36■■■□□ 2.61
PKD1-237ENST00000569983 KDM5DQ9BY66 1539 aa31.35■■■□□ 2.61
PKD1-237ENST00000569983 CROCC2H7BZ55 1655 aa31.35■■■□□ 2.61
PKD1-237ENST00000569983 WASHC2CQ9Y4E1 1318 aa31.33■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms