RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 POTEB3A0JP26 581 aa8.96□□□□□ -0.98
UBR1-211ENST00000569971 POTEBQ6S5H4 581 aa8.96□□□□□ -0.98
UBR1-211ENST00000569971 PHF8Q9UPP1 1060 aa8.95□□□□□ -0.98
UBR1-211ENST00000569971 TMEM92Q6UXU6 159 aa8.93□□□□□ -0.98
UBR1-211ENST00000569971 FBXO22Q8NEZ5 403 aa8.93□□□□□ -0.98
UBR1-211ENST00000569971 ERBB3P21860 1342 aa8.93□□□□□ -0.98
UBR1-211ENST00000569971 BCL11BQ9C0K0 894 aaPredicted RBP8.92□□□□□ -0.98
UBR1-211ENST00000569971 GPR153Q6NV75 609 aa8.89□□□□□ -0.99
UBR1-211ENST00000569971 STK24Q9Y6E0 443 aa8.88□□□□□ -0.99
UBR1-211ENST00000569971 MFRPQ9BY79 579 aa8.87□□□□□ -0.99
UBR1-211ENST00000569971 STK25O00506 426 aa8.86□□□□□ -0.99
UBR1-211ENST00000569971 ECM2O94769 699 aaPredicted RBP8.86□□□□□ -0.99
UBR1-211ENST00000569971 VARS2Q5ST30 1063 aaKnown RBP8.86□□□□□ -0.99
UBR1-211ENST00000569971 ZNF687Q8N1G0 1237 aa8.86□□□□□ -0.99
UBR1-211ENST00000569971 PTGER2P43116 358 aa8.85□□□□□ -0.99
UBR1-211ENST00000569971 KIF3CO14782 793 aa8.84□□□□□ -0.99
UBR1-211ENST00000569971 PKD2Q13563 968 aa8.81□□□□□ -1
UBR1-211ENST00000569971 SLC34A2O95436 690 aa8.8□□□□□ -1
UBR1-211ENST00000569971 ZNF316A6NFI3 1004 aaPredicted RBP8.78□□□□□ -1
UBR1-211ENST00000569971 RNF166Q96A37 237 aaPredicted RBP8.78□□□□□ -1
UBR1-211ENST00000569971 RGL2O15211 777 aa8.77□□□□□ -1.01
UBR1-211ENST00000569971 ARSIQ5FYB1 569 aa8.77□□□□□ -1.01
UBR1-211ENST00000569971 C2orf72A6NCS6 295 aa8.76□□□□□ -1.01
UBR1-211ENST00000569971 PBX2P40425 430 aa8.76□□□□□ -1.01
UBR1-211ENST00000569971 MYT1LQ9UL68 1186 aa8.75□□□□□ -1.01
UBR1-211ENST00000569971 TMC2Q8TDI7 906 aa8.74□□□□□ -1.01
UBR1-211ENST00000569971 PSDA5PKW4 1024 aaPredicted RBP8.72□□□□□ -1.01
UBR1-211ENST00000569971 LSM11P83369 360 aaKnown RBP eCLIP8.7□□□□□ -1.02
UBR1-211ENST00000569971 PCDHGA4Q9Y5G9 962 aa8.7□□□□□ -1.02
UBR1-211ENST00000569971 HS6ST3Q8IZP7 471 aa8.69□□□□□ -1.02
UBR1-211ENST00000569971 KHSRPQ92945 711 aaKnown RBP eCLIP8.68□□□□□ -1.022e-13■■■□□ 16
UBR1-211ENST00000569971 NUDT7P0C024 238 aa8.67□□□□□ -1.02
UBR1-211ENST00000569971 DNAJC5Q9H3Z4 198 aa8.67□□□□□ -1.02
UBR1-211ENST00000569971 DCAF8L2P0C7V8 631 aa8.66□□□□□ -1.02
UBR1-211ENST00000569971 PLCB2Q00722 1185 aa8.66□□□□□ -1.02
UBR1-211ENST00000569971 FOXK1P85037 733 aa8.65□□□□□ -1.02
UBR1-211ENST00000569971 PTCD2Q8WV60 388 aaKnown RBP8.65□□□□□ -1.02
UBR1-211ENST00000569971 RYDENQ9NUL5 291 aaKnown RBP8.65□□□□□ -1.02
UBR1-211ENST00000569971 LHX6Q9UPM6 363 aa8.64□□□□□ -1.03
UBR1-211ENST00000569971 PPP1R37O75864 691 aa8.63□□□□□ -1.03
UBR1-211ENST00000569971 ANKRD13DQ6ZTN6 518 aa8.63□□□□□ -1.03
UBR1-211ENST00000569971 GPHNQ9NQX3 736 aaPredicted RBP8.63□□□□□ -1.03
UBR1-211ENST00000569971 KDM4FA0A1W2PPD8 638 aa8.62□□□□□ -1.03
UBR1-211ENST00000569971 ARHGAP33O14559 1287 aa8.59□□□□□ -1.03
UBR1-211ENST00000569971 TBC1D12O60347 775 aa8.59□□□□□ -1.03
UBR1-211ENST00000569971 TK2O00142 265 aa8.58□□□□□ -1.04
UBR1-211ENST00000569971 POTEEQ6S8J3 1075 aa8.58□□□□□ -1.04
UBR1-211ENST00000569971 PLPP6Q8IY26 295 aa8.57□□□□□ -1.04
UBR1-211ENST00000569971 HAP1P54257 671 aaPredicted RBP8.56□□□□□ -1.04
UBR1-211ENST00000569971 PPP4R3BQ5MIZ7 849 aa8.55□□□□□ -1.04
UBR1-211ENST00000569971 ADGRD1Q6QNK2 874 aa8.55□□□□□ -1.04
UBR1-211ENST00000569971 DSG2Q14126 1118 aa8.54□□□□□ -1.04
UBR1-211ENST00000569971 CHGAP10645 457 aaKnown RBP8.53□□□□□ -1.04
UBR1-211ENST00000569971 HCSTQ9UBK5 93 aa8.53□□□□□ -1.04
UBR1-211ENST00000569971 KCNH8Q96L42 1107 aa8.52□□□□□ -1.05
UBR1-211ENST00000569971 AXIN2Q9Y2T1 843 aa8.52□□□□□ -1.05
UBR1-211ENST00000569971 CRISPLD2Q9H0B8 497 aa8.51□□□□□ -1.05
UBR1-211ENST00000569971 HRO43593 1189 aa8.5□□□□□ -1.05
UBR1-211ENST00000569971 OXER1Q8TDS5 423 aa8.5□□□□□ -1.05
UBR1-211ENST00000569971 NKX1-1Q15270 411 aaPredicted RBP8.48□□□□□ -1.05
UBR1-211ENST00000569971 SLC4A5Q9BY07 1137 aa8.46□□□□□ -1.06
UBR1-211ENST00000569971 PPP1R15BQ5SWA1 713 aa8.45□□□□□ -1.06
UBR1-211ENST00000569971 BBXQ8WY36 941 aaPredicted RBP8.45□□□□□ -1.06
UBR1-211ENST00000569971 PDE4AP27815 886 aa8.44□□□□□ -1.06
UBR1-211ENST00000569971 PSEN2P49810 448 aa8.44□□□□□ -1.06
UBR1-211ENST00000569971 DMRTA1Q5VZB9 504 aa8.44□□□□□ -1.06
UBR1-211ENST00000569971 BCL2L12Q9HB09 334 aa8.44□□□□□ -1.06
UBR1-211ENST00000569971 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.44□□□□□ -1.06
UBR1-211ENST00000569971 PLA2G2EQ9NZK7 142 aa8.43□□□□□ -1.06
UBR1-211ENST00000569971 VSIG10Q8N0Z9 540 aa8.42□□□□□ -1.06
UBR1-211ENST00000569971 PAXIP1Q6ZW49 1069 aaPredicted RBP8.41□□□□□ -1.06
UBR1-211ENST00000569971 JPH4Q96JJ6 628 aa8.41□□□□□ -1.06
UBR1-211ENST00000569971 STAC3Q96MF2 364 aa8.41□□□□□ -1.06
UBR1-211ENST00000569971 KCNK17Q96T54 332 aa8.41□□□□□ -1.06
UBR1-211ENST00000569971 ANO8Q9HCE9 1232 aaPredicted RBP8.41□□□□□ -1.06
UBR1-211ENST00000569971 NCKAP5LQ9HCH0 1330 aa8.4□□□□□ -1.06
UBR1-211ENST00000569971 FOSBP53539 338 aa8.4□□□□□ -1.06
UBR1-211ENST00000569971 ZNF454Q8N9F8 522 aa8.39□□□□□ -1.07
UBR1-211ENST00000569971 CFAP44Q96MT7 982 aa8.39□□□□□ -1.07
UBR1-211ENST00000569971 VPS9D1Q9Y2B5 631 aa8.39□□□□□ -1.07
UBR1-211ENST00000569971 PTPREP23469 700 aa8.38□□□□□ -1.07
UBR1-211ENST00000569971 MFSD10Q14728 455 aa8.38□□□□□ -1.07
UBR1-211ENST00000569971 UPF1Q92900 1129 aaKnown RBP eCLIP8.38□□□□□ -1.07
UBR1-211ENST00000569971 GTPBP6O43824 516 aaPredicted RBP8.37□□□□□ -1.07
UBR1-211ENST00000569971 DDX27Q96GQ7 796 aaKnown RBP8.37□□□□□ -1.07
UBR1-211ENST00000569971 IFFO2Q5TF58 517 aa8.36□□□□□ -1.07
UBR1-211ENST00000569971 KDM2AQ9Y2K7 1162 aa8.36□□□□□ -1.07
UBR1-211ENST00000569971 KCTD12Q96CX2 325 aaKnown RBP8.35□□□□□ -1.07
UBR1-211ENST00000569971 BHMG1C9JSJ3 638 aaPredicted RBP8.34□□□□□ -1.07
UBR1-211ENST00000569971 EVI5O60447 810 aa8.34□□□□□ -1.07
UBR1-211ENST00000569971 BCANQ96GW7 911 aa8.34□□□□□ -1.07
UBR1-211ENST00000569971 ZDHHC16Q969W1 377 aa8.33□□□□□ -1.08
UBR1-211ENST00000569971 ZBED2Q9BTP6 218 aa8.33□□□□□ -1.08
UBR1-211ENST00000569971 SPRYD3Q8NCJ5 442 aa8.32□□□□□ -1.08
UBR1-211ENST00000569971 LARP6Q9BRS8 491 aaKnown RBP8.32□□□□□ -1.08
UBR1-211ENST00000569971 NBPF3Q9H094 633 aa8.32□□□□□ -1.08
UBR1-211ENST00000569971 RGS20O76081 388 aa8.31□□□□□ -1.08
UBR1-211ENST00000569971 MAP3K9P80192 1104 aa8.3□□□□□ -1.08
UBR1-211ENST00000569971 TSHZ2Q9NRE2 1034 aa8.3□□□□□ -1.08
UBR1-211ENST00000569971 PPP1R3GB7ZBB8 358 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms