RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 PCDHB13Q9Y5F0 798 aa5.58□□□□□ -1.52
CNOT1-221ENST00000569924 MROH2BQ7Z745 1585 aa5.58□□□□□ -1.52
CNOT1-221ENST00000569924 KRI1Q8N9T8 703 aaKnown RBP5.57□□□□□ -1.52
CNOT1-221ENST00000569924 FBXO22Q8NEZ5 403 aa5.57□□□□□ -1.52
CNOT1-221ENST00000569924 KDM4CQ9H3R0 1056 aa5.57□□□□□ -1.52
CNOT1-221ENST00000569924 KIF21AQ7Z4S6 1674 aa5.56□□□□□ -1.52
CNOT1-221ENST00000569924 NCKAP5LQ9HCH0 1330 aa5.56□□□□□ -1.52
CNOT1-221ENST00000569924 SOX12O15370 315 aa5.56□□□□□ -1.52
CNOT1-221ENST00000569924 PDE4AP27815 886 aa5.56□□□□□ -1.52
CNOT1-221ENST00000569924 LARP6Q9BRS8 491 aaKnown RBP5.56□□□□□ -1.52
CNOT1-221ENST00000569924 MFSD10Q14728 455 aa5.55□□□□□ -1.52
CNOT1-221ENST00000569924 NPM2Q86SE8 214 aaKnown RBP5.55□□□□□ -1.52
CNOT1-221ENST00000569924 ZNF579Q8NAF0 562 aaKnown RBP5.55□□□□□ -1.52
CNOT1-221ENST00000569924 TSPYL2Q9H2G4 693 aaPredicted RBP5.55□□□□□ -1.52
CNOT1-221ENST00000569924 CADPSQ9ULU8 1353 aa5.55□□□□□ -1.52
CNOT1-221ENST00000569924 TRIM66O15016 1216 aa5.54□□□□□ -1.52
CNOT1-221ENST00000569924 GPIHBP1Q8IV16 184 aa5.54□□□□□ -1.52
CNOT1-221ENST00000569924 RBM42Q9BTD8 480 aaKnown RBP5.54□□□□□ -1.52
CNOT1-221ENST00000569924 MRC2Q9UBG0 1479 aa5.53□□□□□ -1.52
CNOT1-221ENST00000569924 PDE4DQ08499 809 aa5.53□□□□□ -1.52
CNOT1-221ENST00000569924 RBM26Q5T8P6 1007 aaKnown RBP5.53□□□□□ -1.52
CNOT1-221ENST00000569924 REM2Q8IYK8 340 aaPredicted RBP5.53□□□□□ -1.52
CNOT1-221ENST00000569924 EFCAB3Q8N7B9 438 aa5.53□□□□□ -1.52
CNOT1-221ENST00000569924 ARID3AQ99856 593 aa5.53□□□□□ -1.52
CNOT1-221ENST00000569924 C1orf115Q9H7X2 142 aa5.53□□□□□ -1.52
CNOT1-221ENST00000569924 WDR62O43379 1518 aa5.53□□□□□ -1.52
CNOT1-221ENST00000569924 SOCS7O14512 581 aa5.52□□□□□ -1.53
CNOT1-221ENST00000569924 MKRN3Q13064 507 aaKnown RBP5.52□□□□□ -1.53
CNOT1-221ENST00000569924 CAMK2BQ13554 666 aa5.52□□□□□ -1.53
CNOT1-221ENST00000569924 DDX27Q96GQ7 796 aaKnown RBP5.52□□□□□ -1.53
CNOT1-221ENST00000569924 CRISPLD2Q9H0B8 497 aa5.52□□□□□ -1.53
CNOT1-221ENST00000569924 PHF8Q9UPP1 1060 aa5.52□□□□□ -1.53
CNOT1-221ENST00000569924 MLLT3P42568 568 aaPredicted RBP5.5□□□□□ -1.53
CNOT1-221ENST00000569924 CABP2Q9NPB3 220 aa5.5□□□□□ -1.53
CNOT1-221ENST00000569924 CCDC61Q9Y6R9 512 aa5.5□□□□□ -1.53
CNOT1-221ENST00000569924 WIZO95785 1651 aa5.5□□□□□ -1.53
CNOT1-221ENST00000569924 APBB1O00213 710 aa5.49□□□□□ -1.53
CNOT1-221ENST00000569924 FLIIQ13045 1269 aa5.49□□□□□ -1.53
CNOT1-221ENST00000569924 FAM117AQ9C073 453 aa5.49□□□□□ -1.53
CNOT1-221ENST00000569924 CEP164Q9UPV0 1460 aa5.49□□□□□ -1.53
CNOT1-221ENST00000569924 ZNF316A6NFI3 1004 aaPredicted RBP5.48□□□□□ -1.53
CNOT1-221ENST00000569924 CFTRP13569 1480 aa5.47□□□□□ -1.53
CNOT1-221ENST00000569924 FANCD2Q9BXW9 1451 aa5.47□□□□□ -1.53
CNOT1-221ENST00000569924 ZBTB7CA1YPR0 619 aa5.47□□□□□ -1.53
CNOT1-221ENST00000569924 ARID3CA6NKF2 412 aa5.47□□□□□ -1.53
CNOT1-221ENST00000569924 PDIA4P13667 645 aaKnown RBP5.47□□□□□ -1.53
CNOT1-221ENST00000569924 IFNL1Q8IU54 200 aa5.47□□□□□ -1.53
CNOT1-221ENST00000569924 DDRGK1Q96HY6 314 aa5.47□□□□□ -1.53
CNOT1-221ENST00000569924 TOP2AP11388 1531 aaKnown RBP5.45□□□□□ -1.54
CNOT1-221ENST00000569924 PLEKHG3A1L390 1219 aa5.45□□□□□ -1.54
CNOT1-221ENST00000569924 PITPNM1O00562 1244 aa5.45□□□□□ -1.54
CNOT1-221ENST00000569924 MS4A4AQ96JQ5 239 aa5.45□□□□□ -1.54
CNOT1-221ENST00000569924 CCDC9Q9Y3X0 531 aaKnown RBP5.45□□□□□ -1.54
CNOT1-221ENST00000569924 FARP1Q9Y4F1 1045 aaPredicted RBP5.45□□□□□ -1.54
CNOT1-221ENST00000569924 RSF1Q96T23 1441 aaPredicted RBP5.45□□□□□ -1.54
CNOT1-221ENST00000569924 MINK1Q8N4C8 1332 aaPredicted RBP5.45□□□□□ -1.54
CNOT1-221ENST00000569924 SPDYE16A6NNV3 312 aaPredicted RBP5.44□□□□□ -1.54
CNOT1-221ENST00000569924 GOPCQ9HD26 462 aa5.44□□□□□ -1.54
CNOT1-221ENST00000569924 URB2Q14146 1524 aaKnown RBP5.43□□□□□ -1.54
CNOT1-221ENST00000569924 A6NJR5 290 aa5.43□□□□□ -1.54
CNOT1-221ENST00000569924 CHADLQ6NUI6 762 aa5.43□□□□□ -1.54
CNOT1-221ENST00000569924 GPR37O15354 613 aa5.42□□□□□ -1.54
CNOT1-221ENST00000569924 MAP3K13O43283 966 aa5.42□□□□□ -1.54
CNOT1-221ENST00000569924 LMTK3Q96Q04 1460 aa5.42□□□□□ -1.54
CNOT1-221ENST00000569924 PRDM2Q13029 1718 aa5.42□□□□□ -1.54
CNOT1-221ENST00000569924 TRAK2O60296 914 aa5.41□□□□□ -1.54
CNOT1-221ENST00000569924 ONECUT3O60422 494 aaPredicted RBP5.41□□□□□ -1.54
CNOT1-221ENST00000569924 AMHR2Q16671 573 aa5.41□□□□□ -1.54
CNOT1-221ENST00000569924 PPP1R15BQ5SWA1 713 aa5.41□□□□□ -1.54
CNOT1-221ENST00000569924 KIF12Q96FN5 646 aa5.41□□□□□ -1.54
CNOT1-221ENST00000569924 IRF6O14896 467 aa5.4□□□□□ -1.54
CNOT1-221ENST00000569924 MAP2K5Q13163 448 aa5.4□□□□□ -1.54
CNOT1-221ENST00000569924 PDIA6Q15084 440 aa5.4□□□□□ -1.54
CNOT1-221ENST00000569924 CCDC82Q8N4S0 544 aa5.4□□□□□ -1.54
CNOT1-221ENST00000569924 GPHNQ9NQX3 736 aaPredicted RBP5.4□□□□□ -1.54
CNOT1-221ENST00000569924 IFT140Q96RY7 1462 aa5.39□□□□□ -1.55
CNOT1-221ENST00000569924 DPYSL4O14531 572 aa5.39□□□□□ -1.55
CNOT1-221ENST00000569924 PAK3O75914 559 aaPredicted RBP5.39□□□□□ -1.55
CNOT1-221ENST00000569924 PARP9Q8IXQ6 854 aa5.39□□□□□ -1.55
CNOT1-221ENST00000569924 NECTIN2Q92692 538 aa5.39□□□□□ -1.55
CNOT1-221ENST00000569924 CCDC102AQ96A19 550 aa5.39□□□□□ -1.55
CNOT1-221ENST00000569924 CCDC88BA6NC98 1476 aa5.39□□□□□ -1.55
CNOT1-221ENST00000569924 CLUAP1Q96AJ1 413 aa5.38□□□□□ -1.55
CNOT1-221ENST00000569924 EMILIN3Q9NT22 766 aa5.38□□□□□ -1.55
CNOT1-221ENST00000569924 ZNF608Q9ULD9 1512 aaPredicted RBP5.38□□□□□ -1.55
CNOT1-221ENST00000569924 ABCC8Q09428 1581 aa5.38□□□□□ -1.55
CNOT1-221ENST00000569924 RIMBP3CA6NJZ7 1639 aa5.37□□□□□ -1.55
CNOT1-221ENST00000569924 RIMBP3BA6NNM3 1639 aa5.37□□□□□ -1.55
CNOT1-221ENST00000569924 RIMBP3Q9UFD9 1639 aa5.37□□□□□ -1.55
CNOT1-221ENST00000569924 GOLGA2Q08379 1002 aa5.37□□□□□ -1.55
CNOT1-221ENST00000569924 TOPBP1Q92547 1522 aa5.37□□□□□ -1.55
CNOT1-221ENST00000569924 PCMTD1Q96MG8 357 aaPredicted RBP5.36□□□□□ -1.55
CNOT1-221ENST00000569924 DNMBPQ6XZF7 1577 aa5.35□□□□□ -1.55
CNOT1-221ENST00000569924 ARHGEF11O15085 1522 aa5.35□□□□□ -1.55
CNOT1-221ENST00000569924 NUTM2FA1L443 756 aa5.35□□□□□ -1.55
CNOT1-221ENST00000569924 ILDR2Q71H61 639 aa5.35□□□□□ -1.55
CNOT1-221ENST00000569924 TRAIPQ9BWF2 469 aa5.35□□□□□ -1.55
CNOT1-221ENST00000569924 EIF4G3O43432 1585 aaKnown RBP5.34□□□□□ -1.55
CNOT1-221ENST00000569924 GNPATO15228 680 aa5.34□□□□□ -1.55
CNOT1-221ENST00000569924 DSG2Q14126 1118 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms