RNA–Protein interactions for RNA: ENST00000569904.5

SCAMP2-212, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-212ENST00000569904 MADDQ8WXG6 1647 aa20.35■□□□□ 0.85
SCAMP2-212ENST00000569904 ZFYVE16Q7Z3T8 1539 aa20.34■□□□□ 0.85
SCAMP2-212ENST00000569904 CCDC18Q5T9S5 1454 aa20.34■□□□□ 0.85
SCAMP2-212ENST00000569904 CLIP1P30622 1438 aa20.32■□□□□ 0.84
SCAMP2-212ENST00000569904 CDC42BPBQ9Y5S2 1711 aa20.32■□□□□ 0.84
SCAMP2-212ENST00000569904 SCAPERQ9BY12 1400 aa20.31■□□□□ 0.84
SCAMP2-212ENST00000569904 ATP1B4Q9UN42 357 aaPredicted RBP20.3■□□□□ 0.84
SCAMP2-212ENST00000569904 FYCO1Q9BQS8 1478 aa20.3■□□□□ 0.84
SCAMP2-212ENST00000569904 YEATS2Q9ULM3 1422 aa20.29■□□□□ 0.84
SCAMP2-212ENST00000569904 PREX2Q70Z35 1606 aa20.29■□□□□ 0.84
SCAMP2-212ENST00000569904 KDM5CP41229 1560 aa20.29■□□□□ 0.84
SCAMP2-212ENST00000569904 EFCAB2Q5VUJ9 269 aa20.28■□□□□ 0.84
SCAMP2-212ENST00000569904 RIMS1Q86UR5 1692 aaKnown RBP20.27■□□□□ 0.84
SCAMP2-212ENST00000569904 ARHGAP5Q13017 1502 aa20.26■□□□□ 0.83
SCAMP2-212ENST00000569904 ZNF518AQ6AHZ1 1483 aa20.25■□□□□ 0.83
SCAMP2-212ENST00000569904 CDC42BPAQ5VT25 1732 aa20.24■□□□□ 0.83
SCAMP2-212ENST00000569904 ARID4BQ4LE39 1312 aaPredicted RBP20.23■□□□□ 0.83
SCAMP2-212ENST00000569904 ATP10AO60312 1499 aa20.22■□□□□ 0.83
SCAMP2-212ENST00000569904 FER1L4A9Z1Z3 1794 aa20.21■□□□□ 0.83
SCAMP2-212ENST00000569904 ABCC1P33527 1531 aa20.21■□□□□ 0.83
SCAMP2-212ENST00000569904 REREQ9P2R6 1566 aa20.21■□□□□ 0.83
SCAMP2-212ENST00000569904 C9orf84Q5VXU9 1444 aa20.2■□□□□ 0.82
SCAMP2-212ENST00000569904 ITSN2Q9NZM3 1697 aa20.2■□□□□ 0.82
SCAMP2-212ENST00000569904 ARHGEF12Q9NZN5 1544 aa20.19■□□□□ 0.82
SCAMP2-212ENST00000569904 LMTK3Q96Q04 1460 aa20.18■□□□□ 0.82
SCAMP2-212ENST00000569904 MLH3Q9UHC1 1453 aa20.17■□□□□ 0.82
SCAMP2-212ENST00000569904 DIP2CQ9Y2E4 1556 aa20.17■□□□□ 0.82
SCAMP2-212ENST00000569904 ABCA6Q8N139 1617 aa20.14■□□□□ 0.81
SCAMP2-212ENST00000569904 AFAP1Q8N556 730 aa20.12■□□□□ 0.81
SCAMP2-212ENST00000569904 KIDINS220Q9ULH0 1771 aa20.11■□□□□ 0.81
SCAMP2-212ENST00000569904 SAMD9LQ8IVG5 1584 aa20.11■□□□□ 0.81
SCAMP2-212ENST00000569904 TRAPPC8Q9Y2L5 1435 aa20.1■□□□□ 0.81
SCAMP2-212ENST00000569904 GPATCH8Q9UKJ3 1502 aaKnown RBP20.1■□□□□ 0.81
SCAMP2-212ENST00000569904 AGLP35573 1532 aa20.09■□□□□ 0.81
SCAMP2-212ENST00000569904 ILDR1Q86SU0 546 aaPredicted RBP20.05■□□□□ 0.8
SCAMP2-212ENST00000569904 PREX1Q8TCU6 1659 aa20.05■□□□□ 0.8
SCAMP2-212ENST00000569904 SYCP2Q9BX26 1530 aa20.04■□□□□ 0.8
SCAMP2-212ENST00000569904 CEP162Q5TB80 1403 aa20.03■□□□□ 0.8
SCAMP2-212ENST00000569904 EHBP1L1Q8N3D4 1523 aa20.03■□□□□ 0.8
SCAMP2-212ENST00000569904 KIAA1107Q9UPP5 1409 aa20.02■□□□□ 0.8
SCAMP2-212ENST00000569904 MLECQ14165 292 aa20.02■□□□□ 0.8
SCAMP2-212ENST00000569904 TIAM1Q13009 1591 aa20.01■□□□□ 0.79
SCAMP2-212ENST00000569904 PLEKHH2Q8IVE3 1493 aa20.01■□□□□ 0.79
SCAMP2-212ENST00000569904 INO80Q9ULG1 1556 aaPredicted RBP20■□□□□ 0.79
SCAMP2-212ENST00000569904 C3P01024 1663 aa20■□□□□ 0.79
SCAMP2-212ENST00000569904 SETD1BQ9UPS6 1966 aaKnown RBP19.99■□□□□ 0.79
SCAMP2-212ENST00000569904 MTUS2Q5JR59 1369 aa19.99■□□□□ 0.79
SCAMP2-212ENST00000569904 CCNB3Q8WWL7 1395 aa19.97■□□□□ 0.79
SCAMP2-212ENST00000569904 ATP7AQ04656 1500 aa19.97■□□□□ 0.79
SCAMP2-212ENST00000569904 PLXNC1O60486 1568 aa19.96■□□□□ 0.79
SCAMP2-212ENST00000569904 MROH2AA6NES4 1674 aa19.96■□□□□ 0.79
SCAMP2-212ENST00000569904 MYT1LQ9UL68 1186 aa19.95■□□□□ 0.78
SCAMP2-212ENST00000569904 CFDP1Q9UEE9 299 aaPredicted RBP19.94■□□□□ 0.78
SCAMP2-212ENST00000569904 SUPT6HQ7KZ85 1726 aaKnown RBP19.93■□□□□ 0.78
SCAMP2-212ENST00000569904 ADGBQ8N7X0 1667 aa19.92■□□□□ 0.78
SCAMP2-212ENST00000569904 ZNF777Q9ULD5 760 aaPredicted RBP19.92■□□□□ 0.78
SCAMP2-212ENST00000569904 CNTLNQ9NXG0 1405 aa19.92■□□□□ 0.78
SCAMP2-212ENST00000569904 MBD5Q9P267 1494 aa19.92■□□□□ 0.78
SCAMP2-212ENST00000569904 HNRNPMP52272 730 aaKnown RBP eCLIP19.91■□□□□ 0.78
SCAMP2-212ENST00000569904 HSPA2P54652 639 aa19.91■□□□□ 0.78
SCAMP2-212ENST00000569904 SPAG9O60271 1321 aaKnown RBP19.91■□□□□ 0.78
SCAMP2-212ENST00000569904 STRCQ7RTU9 1775 aa19.9■□□□□ 0.78
SCAMP2-212ENST00000569904 CEBPAP49715 358 aaPredicted RBP19.89■□□□□ 0.77
SCAMP2-212ENST00000569904 PLPPR3Q6T4P5 718 aa19.89■□□□□ 0.77
SCAMP2-212ENST00000569904 A2MP01023 1474 aa19.88■□□□□ 0.77
SCAMP2-212ENST00000569904 UHRF1BP1Q6BDS2 1440 aa19.87■□□□□ 0.77
SCAMP2-212ENST00000569904 RTEL1-TNFRSF6BF6WH68 1400 aa19.86■□□□□ 0.77
SCAMP2-212ENST00000569904 VPS8Q8N3P4 1428 aa19.86■□□□□ 0.77
SCAMP2-212ENST00000569904 NCOA2Q15596 1464 aa19.86■□□□□ 0.77
SCAMP2-212ENST00000569904 FBXO41Q8TF61 875 aa19.85■□□□□ 0.77
SCAMP2-212ENST00000569904 MAP3K1Q13233 1512 aa19.83■□□□□ 0.77
SCAMP2-212ENST00000569904 CLTCQ00610 1675 aaKnown RBP19.83■□□□□ 0.76
SCAMP2-212ENST00000569904 NPATQ14207 1427 aa19.83■□□□□ 0.76
SCAMP2-212ENST00000569904 ZNF644Q9H582 1327 aaPredicted RBP19.82■□□□□ 0.76
SCAMP2-212ENST00000569904 CAMSAP2Q08AD1 1489 aa19.81■□□□□ 0.76
SCAMP2-212ENST00000569904 ESF1Q9H501 851 aaKnown RBP19.81■□□□□ 0.76
SCAMP2-212ENST00000569904 LRRC9Q6ZRR7 1453 aa19.8■□□□□ 0.76
SCAMP2-212ENST00000569904 ARHGEF5Q12774 1597 aa19.8■□□□□ 0.76
SCAMP2-212ENST00000569904 CCDC141Q6ZP82 1450 aa19.79■□□□□ 0.76
SCAMP2-212ENST00000569904 ZNF142P52746 1687 aaPredicted RBP19.78■□□□□ 0.76
SCAMP2-212ENST00000569904 ZMYM3Q14202 1370 aa19.78■□□□□ 0.76
SCAMP2-212ENST00000569904 LOC105371045A0A1W2PR82 267 aa19.76■□□□□ 0.75
SCAMP2-212ENST00000569904 RSPH4AQ5TD94 716 aa19.76■□□□□ 0.75
SCAMP2-212ENST00000569904 PPP6R1Q9UPN7 881 aa19.76■□□□□ 0.75
SCAMP2-212ENST00000569904 FAM135AQ9P2D6 1515 aa19.76■□□□□ 0.75
SCAMP2-212ENST00000569904 DHX29Q7Z478 1369 aaKnown RBP19.75■□□□□ 0.75
SCAMP2-212ENST00000569904 MYO3AQ8NEV4 1616 aa19.75■□□□□ 0.75
SCAMP2-212ENST00000569904 DMRT2Q9Y5R5 561 aa19.74■□□□□ 0.75
SCAMP2-212ENST00000569904 PTPRTO14522 1441 aa19.74■□□□□ 0.75
SCAMP2-212ENST00000569904 MAST1Q9Y2H9 1570 aa19.73■□□□□ 0.75
SCAMP2-212ENST00000569904 PTPRKQ15262 1439 aa19.72■□□□□ 0.75
SCAMP2-212ENST00000569904 NCOA1Q15788 1441 aa19.72■□□□□ 0.75
SCAMP2-212ENST00000569904 CERKQ8TCT0 537 aa19.69■□□□□ 0.74
SCAMP2-212ENST00000569904 CAMSAP1Q5T5Y3 1602 aa19.69■□□□□ 0.74
SCAMP2-212ENST00000569904 MIA2Q96PC5 1412 aa19.68■□□□□ 0.74
SCAMP2-212ENST00000569904 GGT6Q6P531 493 aa19.68■□□□□ 0.74
SCAMP2-212ENST00000569904 CEP170BQ9Y4F5 1589 aaPredicted RBP19.68■□□□□ 0.74
SCAMP2-212ENST00000569904 KDM5DQ9BY66 1539 aa19.67■□□□□ 0.74
SCAMP2-212ENST00000569904 PLA2R1Q13018 1463 aa19.66■□□□□ 0.74
SCAMP2-212ENST00000569904 RNF17Q9BXT8 1623 aaKnown RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms