RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 EFCAB2Q5VUJ9 269 aa21.46■■□□□ 1.03
SPG7-221ENST00000569720 POGZQ7Z3K3 1410 aa21.46■■□□□ 1.03
SPG7-221ENST00000569720 LRRIQ1Q96JM4 1722 aa21.45■■□□□ 1.02
SPG7-221ENST00000569720 TROQ12816 1431 aaPredicted RBP21.45■■□□□ 1.02
SPG7-221ENST00000569720 RIMS1Q86UR5 1692 aaKnown RBP21.44■■□□□ 1.02
SPG7-221ENST00000569720 YEATS2Q9ULM3 1422 aa21.41■■□□□ 1.02
SPG7-221ENST00000569720 ILDR1Q86SU0 546 aaPredicted RBP21.4■■□□□ 1.02
SPG7-221ENST00000569720 ARHGAP5Q13017 1502 aa21.39■■□□□ 1.02
SPG7-221ENST00000569720 CCDC18Q5T9S5 1454 aa21.39■■□□□ 1.02
SPG7-221ENST00000569720 CASKIN1Q8WXD9 1431 aa21.38■■□□□ 1.01
SPG7-221ENST00000569720 PCF11O94913 1555 aaKnown RBP21.38■■□□□ 1.01
SPG7-221ENST00000569720 SIGLEC1Q9BZZ2 1709 aa21.36■■□□□ 1.01
SPG7-221ENST00000569720 ATP10AO60312 1499 aa21.35■■□□□ 1.01
SPG7-221ENST00000569720 ZNF518AQ6AHZ1 1483 aa21.35■■□□□ 1.01
SPG7-221ENST00000569720 FER1L4A9Z1Z3 1794 aa21.34■■□□□ 1.01
SPG7-221ENST00000569720 CDC42BPBQ9Y5S2 1711 aa21.34■■□□□ 1.01
SPG7-221ENST00000569720 MLECQ14165 292 aa21.33■■□□□ 1.01
SPG7-221ENST00000569720 C9orf84Q5VXU9 1444 aa21.32■■□□□ 1
SPG7-221ENST00000569720 FYCO1Q9BQS8 1478 aa21.32■■□□□ 1
SPG7-221ENST00000569720 PREX2Q70Z35 1606 aa21.31■■□□□ 1
SPG7-221ENST00000569720 PLPPR3Q6T4P5 718 aa21.3■■□□□ 1
SPG7-221ENST00000569720 MYT1LQ9UL68 1186 aa21.3■■□□□ 1
SPG7-221ENST00000569720 KDM5CP41229 1560 aa21.3■■□□□ 1
SPG7-221ENST00000569720 LMTK3Q96Q04 1460 aa21.29■■□□□ 1
SPG7-221ENST00000569720 AFAP1Q8N556 730 aa21.28■■□□□ 1
SPG7-221ENST00000569720 CDC42BPAQ5VT25 1732 aa21.26■□□□□ 0.99
SPG7-221ENST00000569720 ARHGEF12Q9NZN5 1544 aa21.25■□□□□ 0.99
SPG7-221ENST00000569720 ITSN2Q9NZM3 1697 aa21.24■□□□□ 0.99
SPG7-221ENST00000569720 ABCC1P33527 1531 aa21.24■□□□□ 0.99
SPG7-221ENST00000569720 DIP2CQ9Y2E4 1556 aa21.23■□□□□ 0.99
SPG7-221ENST00000569720 MLH3Q9UHC1 1453 aa21.22■□□□□ 0.99
SPG7-221ENST00000569720 REREQ9P2R6 1566 aa21.2■□□□□ 0.98
SPG7-221ENST00000569720 ABCA6Q8N139 1617 aa21.19■□□□□ 0.98
SPG7-221ENST00000569720 TRAPPC8Q9Y2L5 1435 aa21.19■□□□□ 0.98
SPG7-221ENST00000569720 HSPA2P54652 639 aa21.17■□□□□ 0.98
SPG7-221ENST00000569720 PREX1Q8TCU6 1659 aa21.16■□□□□ 0.98
SPG7-221ENST00000569720 ZNF777Q9ULD5 760 aaPredicted RBP21.16■□□□□ 0.98
SPG7-221ENST00000569720 FBXO41Q8TF61 875 aa21.14■□□□□ 0.97
SPG7-221ENST00000569720 KIDINS220Q9ULH0 1771 aa21.14■□□□□ 0.97
SPG7-221ENST00000569720 GPATCH8Q9UKJ3 1502 aaKnown RBP21.14■□□□□ 0.97
SPG7-221ENST00000569720 ESF1Q9H501 851 aaKnown RBP21.13■□□□□ 0.97
SPG7-221ENST00000569720 SAMD9LQ8IVG5 1584 aa21.13■□□□□ 0.97
SPG7-221ENST00000569720 AGLP35573 1532 aa21.13■□□□□ 0.97
SPG7-221ENST00000569720 MTUS2Q5JR59 1369 aa21.12■□□□□ 0.97
SPG7-221ENST00000569720 SETD1BQ9UPS6 1966 aaKnown RBP21.12■□□□□ 0.97
SPG7-221ENST00000569720 CEBPAP49715 358 aaPredicted RBP21.12■□□□□ 0.97
SPG7-221ENST00000569720 CCNB3Q8WWL7 1395 aa21.1■□□□□ 0.97
SPG7-221ENST00000569720 SYCP2Q9BX26 1530 aa21.1■□□□□ 0.97
SPG7-221ENST00000569720 PLEKHH2Q8IVE3 1493 aa21.09■□□□□ 0.97
SPG7-221ENST00000569720 CFDP1Q9UEE9 299 aaPredicted RBP21.09■□□□□ 0.97
SPG7-221ENST00000569720 SPAG9O60271 1321 aaKnown RBP21.07■□□□□ 0.96
SPG7-221ENST00000569720 C3P01024 1663 aa21.06■□□□□ 0.96
SPG7-221ENST00000569720 KIAA1107Q9UPP5 1409 aa21.06■□□□□ 0.96
SPG7-221ENST00000569720 HNRNPMP52272 730 aaKnown RBP eCLIP21.06■□□□□ 0.96
SPG7-221ENST00000569720 UHRF1BP1Q6BDS2 1440 aa21.05■□□□□ 0.96
SPG7-221ENST00000569720 CEP162Q5TB80 1403 aa21.04■□□□□ 0.96
SPG7-221ENST00000569720 EHBP1L1Q8N3D4 1523 aa21.04■□□□□ 0.96
SPG7-221ENST00000569720 CNTLNQ9NXG0 1405 aa21.04■□□□□ 0.96
SPG7-221ENST00000569720 ATP7AQ04656 1500 aa21.03■□□□□ 0.96
SPG7-221ENST00000569720 SUPT6HQ7KZ85 1726 aaKnown RBP21.02■□□□□ 0.96
SPG7-221ENST00000569720 TIAM1Q13009 1591 aa21■□□□□ 0.95
SPG7-221ENST00000569720 INO80Q9ULG1 1556 aaPredicted RBP21■□□□□ 0.95
SPG7-221ENST00000569720 DMRT2Q9Y5R5 561 aa20.99■□□□□ 0.95
SPG7-221ENST00000569720 MROH2AA6NES4 1674 aa20.99■□□□□ 0.95
SPG7-221ENST00000569720 STRCQ7RTU9 1775 aa20.96■□□□□ 0.95
SPG7-221ENST00000569720 ADGBQ8N7X0 1667 aa20.96■□□□□ 0.95
SPG7-221ENST00000569720 A2MP01023 1474 aa20.95■□□□□ 0.94
SPG7-221ENST00000569720 PLXNC1O60486 1568 aa20.95■□□□□ 0.94
SPG7-221ENST00000569720 CERKQ8TCT0 537 aa20.93■□□□□ 0.94
SPG7-221ENST00000569720 ZNF644Q9H582 1327 aaPredicted RBP20.92■□□□□ 0.94
SPG7-221ENST00000569720 CLTCQ00610 1675 aaKnown RBP20.92■□□□□ 0.94
SPG7-221ENST00000569720 MBD5Q9P267 1494 aa20.9■□□□□ 0.94
SPG7-221ENST00000569720 NPATQ14207 1427 aa20.9■□□□□ 0.94
SPG7-221ENST00000569720 ZMYM3Q14202 1370 aa20.9■□□□□ 0.94
SPG7-221ENST00000569720 NCOA2Q15596 1464 aa20.88■□□□□ 0.93
SPG7-221ENST00000569720 RTEL1-TNFRSF6BF6WH68 1400 aa20.88■□□□□ 0.93
SPG7-221ENST00000569720 GGT6Q6P531 493 aa20.88■□□□□ 0.93
SPG7-221ENST00000569720 PPP6R1Q9UPN7 881 aa20.87■□□□□ 0.93
SPG7-221ENST00000569720 PTPRTO14522 1441 aa20.86■□□□□ 0.93
SPG7-221ENST00000569720 RSPH4AQ5TD94 716 aa20.85■□□□□ 0.93
SPG7-221ENST00000569720 CAMSAP2Q08AD1 1489 aa20.85■□□□□ 0.93
SPG7-221ENST00000569720 CCDC141Q6ZP82 1450 aa20.84■□□□□ 0.93
SPG7-221ENST00000569720 VPS8Q8N3P4 1428 aa20.84■□□□□ 0.93
SPG7-221ENST00000569720 NCOA1Q15788 1441 aa20.82■□□□□ 0.92
SPG7-221ENST00000569720 LOC105371045A0A1W2PR82 267 aa20.82■□□□□ 0.92
SPG7-221ENST00000569720 DHX29Q7Z478 1369 aaKnown RBP20.82■□□□□ 0.92
SPG7-221ENST00000569720 CAMSAP1Q5T5Y3 1602 aa20.81■□□□□ 0.92
SPG7-221ENST00000569720 MYO3AQ8NEV4 1616 aa20.8■□□□□ 0.92
SPG7-221ENST00000569720 ZNF142P52746 1687 aaPredicted RBP20.8■□□□□ 0.92
SPG7-221ENST00000569720 PTPRKQ15262 1439 aa20.79■□□□□ 0.92
SPG7-221ENST00000569720 LRRC9Q6ZRR7 1453 aa20.79■□□□□ 0.92
SPG7-221ENST00000569720 ARHGEF5Q12774 1597 aa20.78■□□□□ 0.92
SPG7-221ENST00000569720 TSPY4P0CV99 314 aa20.77■□□□□ 0.92
SPG7-221ENST00000569720 TSPY10P0CW01 314 aa20.77■□□□□ 0.92
SPG7-221ENST00000569720 KIF3BO15066 747 aa20.76■□□□□ 0.91
SPG7-221ENST00000569720 CEP170BQ9Y4F5 1589 aaPredicted RBP20.76■□□□□ 0.91
SPG7-221ENST00000569720 MAP3K1Q13233 1512 aa20.74■□□□□ 0.91
SPG7-221ENST00000569720 FAM135AQ9P2D6 1515 aa20.74■□□□□ 0.91
SPG7-221ENST00000569720 PLA2R1Q13018 1463 aa20.72■□□□□ 0.91
SPG7-221ENST00000569720 KDM5DQ9BY66 1539 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms