RNA–Protein interactions for RNA: ENST00000569606.1

EDC3-217, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 2

Gene EDC3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-217ENST00000569606 FAM69CQ0P6D2 419 aa19.17■□□□□ 0.66
EDC3-217ENST00000569606 CD109Q6YHK3 1445 aa19.17■□□□□ 0.66
EDC3-217ENST00000569606 ARHGAP5Q13017 1502 aa19.16■□□□□ 0.66
EDC3-217ENST00000569606 TCOF1Q13428 1488 aaKnown RBP19.16■□□□□ 0.66
EDC3-217ENST00000569606 CFDP1Q9UEE9 299 aaPredicted RBP19.15■□□□□ 0.66
EDC3-217ENST00000569606 SAMD9LQ8IVG5 1584 aa19.13■□□□□ 0.65
EDC3-217ENST00000569606 CAMSAP2Q08AD1 1489 aa19.12■□□□□ 0.65
EDC3-217ENST00000569606 TRIM26Q12899 539 aaPredicted RBP19.12■□□□□ 0.65
EDC3-217ENST00000569606 PPRC1Q5VV67 1664 aaKnown RBP19.11■□□□□ 0.65
EDC3-217ENST00000569606 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.11■□□□□ 0.65
EDC3-217ENST00000569606 TSPOAP1O95153 1857 aa19.11■□□□□ 0.65
EDC3-217ENST00000569606 CFAP74Q9C0B2 1584 aa19.1■□□□□ 0.65
EDC3-217ENST00000569606 FANCAO15360 1455 aa19.1■□□□□ 0.65
EDC3-217ENST00000569606 ZNF644Q9H582 1327 aaPredicted RBP19.09■□□□□ 0.65
EDC3-217ENST00000569606 EFCAB2Q5VUJ9 269 aa19.09■□□□□ 0.65
EDC3-217ENST00000569606 ZNF777Q9ULD5 760 aaPredicted RBP19.09■□□□□ 0.65
EDC3-217ENST00000569606 FAM50AQ14320 339 aaKnown RBP19.08■□□□□ 0.64
EDC3-217ENST00000569606 ABCC1P33527 1531 aa19.06■□□□□ 0.64
EDC3-217ENST00000569606 PLEKHH2Q8IVE3 1493 aa19.05■□□□□ 0.64
EDC3-217ENST00000569606 NEO1Q92859 1461 aa19.05■□□□□ 0.64
EDC3-217ENST00000569606 DNMT1P26358 1616 aaKnown RBP19.04■□□□□ 0.64
EDC3-217ENST00000569606 SYCP2Q9BX26 1530 aa19.04■□□□□ 0.64
EDC3-217ENST00000569606 TEX14Q8IWB6 1497 aa19.03■□□□□ 0.64
EDC3-217ENST00000569606 AKNAQ7Z591 1439 aa19.03■□□□□ 0.64
EDC3-217ENST00000569606 KIAA1107Q9UPP5 1409 aa19.03■□□□□ 0.64
EDC3-217ENST00000569606 TRHP20396 242 aaPredicted RBP19.03■□□□□ 0.64
EDC3-217ENST00000569606 MBD5Q9P267 1494 aa19.03■□□□□ 0.64
EDC3-217ENST00000569606 ARHGEF5Q12774 1597 aa19.02■□□□□ 0.64
EDC3-217ENST00000569606 ARHGEF12Q9NZN5 1544 aa19.02■□□□□ 0.64
EDC3-217ENST00000569606 ADGRL1O94910 1474 aa19.02■□□□□ 0.63
EDC3-217ENST00000569606 CROCC2H7BZ55 1655 aa19.01■□□□□ 0.63
EDC3-217ENST00000569606 DAPK1P53355 1430 aa19■□□□□ 0.63
EDC3-217ENST00000569606 ABCC5O15440 1437 aa18.99■□□□□ 0.63
EDC3-217ENST00000569606 HNRNPMP52272 730 aaKnown RBP eCLIP18.98■□□□□ 0.63
EDC3-217ENST00000569606 SCAPERQ9BY12 1400 aa18.98■□□□□ 0.63
EDC3-217ENST00000569606 PTPRKQ15262 1439 aa18.97■□□□□ 0.63
EDC3-217ENST00000569606 CCDC141Q6ZP82 1450 aa18.97■□□□□ 0.63
EDC3-217ENST00000569606 ITGAEP38570 1179 aa18.96■□□□□ 0.63
EDC3-217ENST00000569606 TRAPPC8Q9Y2L5 1435 aa18.95■□□□□ 0.62
EDC3-217ENST00000569606 PCGF6Q9BYE7 350 aa18.95■□□□□ 0.62
EDC3-217ENST00000569606 RSPH4AQ5TD94 716 aa18.94■□□□□ 0.62
EDC3-217ENST00000569606 SHANK2Q9UPX8 1470 aa18.93■□□□□ 0.62
EDC3-217ENST00000569606 RICTORQ6R327 1708 aa18.93■□□□□ 0.62
EDC3-217ENST00000569606 MAST1Q9Y2H9 1570 aa18.92■□□□□ 0.62
EDC3-217ENST00000569606 ADGBQ8N7X0 1667 aa18.92■□□□□ 0.62
EDC3-217ENST00000569606 POGZQ7Z3K3 1410 aa18.91■□□□□ 0.62
EDC3-217ENST00000569606 DENND4BO75064 1496 aaPredicted RBP18.91■□□□□ 0.62
EDC3-217ENST00000569606 ZNF518AQ6AHZ1 1483 aa18.9■□□□□ 0.62
EDC3-217ENST00000569606 KDM5CP41229 1560 aa18.9■□□□□ 0.62
EDC3-217ENST00000569606 C9orf84Q5VXU9 1444 aa18.9■□□□□ 0.62
EDC3-217ENST00000569606 FRMPD1Q5SYB0 1578 aa18.89■□□□□ 0.62
EDC3-217ENST00000569606 AFAP1Q8N556 730 aa18.88■□□□□ 0.61
EDC3-217ENST00000569606 ADGRL2O95490 1459 aa18.88■□□□□ 0.61
EDC3-217ENST00000569606 TSPY4P0CV99 314 aa18.87■□□□□ 0.61
EDC3-217ENST00000569606 TSPY10P0CW01 314 aa18.87■□□□□ 0.61
EDC3-217ENST00000569606 CHIC2Q9UKJ5 165 aa18.87■□□□□ 0.61
EDC3-217ENST00000569606 INO80Q9ULG1 1556 aaPredicted RBP18.87■□□□□ 0.61
EDC3-217ENST00000569606 COL17A1Q9UMD9 1497 aaPredicted RBP18.87■□□□□ 0.61
EDC3-217ENST00000569606 ZFYVE16Q7Z3T8 1539 aa18.85■□□□□ 0.61
EDC3-217ENST00000569606 ROCK1Q13464 1354 aa18.85■□□□□ 0.61
EDC3-217ENST00000569606 HECW2Q9P2P5 1572 aa18.85■□□□□ 0.61
EDC3-217ENST00000569606 ATP7AQ04656 1500 aa18.84■□□□□ 0.61
EDC3-217ENST00000569606 RTEL1-TNFRSF6BF6WH68 1400 aa18.84■□□□□ 0.61
EDC3-217ENST00000569606 KIDINS220Q9ULH0 1771 aa18.84■□□□□ 0.61
EDC3-217ENST00000569606 RAPGEF3O95398 923 aa18.84■□□□□ 0.61
EDC3-217ENST00000569606 GCC2Q8IWJ2 1684 aa18.84■□□□□ 0.61
EDC3-217ENST00000569606 PLXNC1O60486 1568 aa18.84■□□□□ 0.61
EDC3-217ENST00000569606 ZMYM4Q5VZL5 1548 aa18.84■□□□□ 0.61
EDC3-217ENST00000569606 SPAG9O60271 1321 aaKnown RBP18.83■□□□□ 0.61
EDC3-217ENST00000569606 NCOA1Q15788 1441 aa18.83■□□□□ 0.6
EDC3-217ENST00000569606 ANKRD30AQ9BXX3 1397 aa18.82■□□□□ 0.6
EDC3-217ENST00000569606 MLH3Q9UHC1 1453 aa18.82■□□□□ 0.6
EDC3-217ENST00000569606 HFM1A2PYH4 1435 aa18.82■□□□□ 0.6
EDC3-217ENST00000569606 KDM6BO15054 1643 aa18.81■□□□□ 0.6
EDC3-217ENST00000569606 RRP7BPQ9NSQ0 103 aa18.8■□□□□ 0.6
EDC3-217ENST00000569606 NAIPQ13075 1403 aa18.8■□□□□ 0.6
EDC3-217ENST00000569606 ABCA6Q8N139 1617 aa18.77■□□□□ 0.6
EDC3-217ENST00000569606 KIF15Q9NS87 1388 aa18.77■□□□□ 0.6
EDC3-217ENST00000569606 SETD5Q9C0A6 1442 aa18.76■□□□□ 0.59
EDC3-217ENST00000569606 MAGI2Q86UL8 1455 aa18.76■□□□□ 0.59
EDC3-217ENST00000569606 DIP2CQ9Y2E4 1556 aa18.75■□□□□ 0.59
EDC3-217ENST00000569606 MYT1LQ9UL68 1186 aa18.74■□□□□ 0.59
EDC3-217ENST00000569606 DUOX2Q9NRD8 1548 aa18.74■□□□□ 0.59
EDC3-217ENST00000569606 YEATS2Q9ULM3 1422 aa18.74■□□□□ 0.59
EDC3-217ENST00000569606 RAB3GAP2Q9H2M9 1393 aa18.72■□□□□ 0.59
EDC3-217ENST00000569606 ANKRD50Q9ULJ7 1429 aa18.71■□□□□ 0.59
EDC3-217ENST00000569606 ARHGEF40Q8TER5 1519 aa18.7■□□□□ 0.58
EDC3-217ENST00000569606 ERBINQ96RT1 1412 aa18.69■□□□□ 0.58
EDC3-217ENST00000569606 A2MP01023 1474 aa18.69■□□□□ 0.58
EDC3-217ENST00000569606 DHX29Q7Z478 1369 aaKnown RBP18.68■□□□□ 0.58
EDC3-217ENST00000569606 EIF2AK4Q9P2K8 1649 aaKnown RBP18.67■□□□□ 0.58
EDC3-217ENST00000569606 REREQ9P2R6 1566 aa18.67■□□□□ 0.58
EDC3-217ENST00000569606 ATP10AO60312 1499 aa18.66■□□□□ 0.58
EDC3-217ENST00000569606 HRCP23327 699 aa18.66■□□□□ 0.58
EDC3-217ENST00000569606 BCORL1Q5H9F3 1711 aa18.64■□□□□ 0.57
EDC3-217ENST00000569606 UNC13BO14795 1591 aa18.62■□□□□ 0.57
EDC3-217ENST00000569606 SIGLEC1Q9BZZ2 1709 aa18.62■□□□□ 0.57
EDC3-217ENST00000569606 DEPDC5O75140 1603 aa18.61■□□□□ 0.57
EDC3-217ENST00000569606 RNF17Q9BXT8 1623 aaKnown RBP18.6■□□□□ 0.57
EDC3-217ENST00000569606 AGLP35573 1532 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms