RNA–Protein interactions for RNA: ENST00000569341.1

CFDP1-208, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 454 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-208ENST00000569341 GPR153Q6NV75 609 aa10.9□□□□□ -0.66
CFDP1-208ENST00000569341 RIMBP2O15034 1052 aa10.89□□□□□ -0.67
CFDP1-208ENST00000569341 NLRP6P59044 892 aa10.89□□□□□ -0.67
CFDP1-208ENST00000569341 MFRPQ9BY79 579 aa10.88□□□□□ -0.67
CFDP1-208ENST00000569341 ZSWIM6Q9HCJ5 1215 aa10.88□□□□□ -0.67
CFDP1-208ENST00000569341 STK24Q9Y6E0 443 aa10.87□□□□□ -0.67
CFDP1-208ENST00000569341 VARS2Q5ST30 1063 aaKnown RBP10.86□□□□□ -0.67
CFDP1-208ENST00000569341 ECM2O94769 699 aaPredicted RBP10.83□□□□□ -0.68
CFDP1-208ENST00000569341 PKD2Q13563 968 aa10.83□□□□□ -0.68
CFDP1-208ENST00000569341 TAOK2Q9UL54 1235 aa10.83□□□□□ -0.68
CFDP1-208ENST00000569341 STK25O00506 426 aa10.82□□□□□ -0.68
CFDP1-208ENST00000569341 ARSIQ5FYB1 569 aa10.81□□□□□ -0.68
CFDP1-208ENST00000569341 ZNF687Q8N1G0 1237 aa10.81□□□□□ -0.68
CFDP1-208ENST00000569341 KIF3CO14782 793 aa10.8□□□□□ -0.68
CFDP1-208ENST00000569341 RGL2O15211 777 aa10.8□□□□□ -0.68
CFDP1-208ENST00000569341 KHSRPQ92945 711 aaKnown RBP eCLIP10.79□□□□□ -0.683e-11■■■■□ 20
CFDP1-208ENST00000569341 C2orf72A6NCS6 295 aa10.76□□□□□ -0.69
CFDP1-208ENST00000569341 ZNF316A6NFI3 1004 aaPredicted RBP10.73□□□□□ -0.69
CFDP1-208ENST00000569341 PPP1R37O75864 691 aa10.7□□□□□ -0.7
CFDP1-208ENST00000569341 RNF166Q96A37 237 aaPredicted RBP10.7□□□□□ -0.7
CFDP1-208ENST00000569341 MYT1LQ9UL68 1186 aa10.67□□□□□ -0.7
CFDP1-208ENST00000569341 SLC34A2O95436 690 aa10.66□□□□□ -0.7
CFDP1-208ENST00000569341 NUDT7P0C024 238 aa10.66□□□□□ -0.7
CFDP1-208ENST00000569341 PCDHGA4Q9Y5G9 962 aa10.65□□□□□ -0.7
CFDP1-208ENST00000569341 POTEEQ6S8J3 1075 aa10.64□□□□□ -0.71
CFDP1-208ENST00000569341 ANKRD13DQ6ZTN6 518 aa10.63□□□□□ -0.71
CFDP1-208ENST00000569341 LHX6Q9UPM6 363 aa10.62□□□□□ -0.71
CFDP1-208ENST00000569341 LSM11P83369 360 aaKnown RBP eCLIP10.61□□□□□ -0.71
CFDP1-208ENST00000569341 TMC2Q8TDI7 906 aa10.61□□□□□ -0.71
CFDP1-208ENST00000569341 PTGER2P43116 358 aa10.59□□□□□ -0.71
CFDP1-208ENST00000569341 KDM4FA0A1W2PPD8 638 aa10.58□□□□□ -0.72
CFDP1-208ENST00000569341 AXIN2Q9Y2T1 843 aa10.56□□□□□ -0.72
CFDP1-208ENST00000569341 PBX2P40425 430 aa10.55□□□□□ -0.72
CFDP1-208ENST00000569341 HS6ST3Q8IZP7 471 aa10.55□□□□□ -0.72
CFDP1-208ENST00000569341 PTCD2Q8WV60 388 aaKnown RBP10.53□□□□□ -0.72
CFDP1-208ENST00000569341 FOXK1P85037 733 aa10.52□□□□□ -0.73
CFDP1-208ENST00000569341 PLPP6Q8IY26 295 aa10.5□□□□□ -0.73
CFDP1-208ENST00000569341 GPHNQ9NQX3 736 aaPredicted RBP10.5□□□□□ -0.73
CFDP1-208ENST00000569341 DSG2Q14126 1118 aa10.48□□□□□ -0.73
CFDP1-208ENST00000569341 NKX1-1Q15270 411 aaPredicted RBP10.47□□□□□ -0.73
CFDP1-208ENST00000569341 ARHGAP33O14559 1287 aa10.46□□□□□ -0.73
CFDP1-208ENST00000569341 CHGAP10645 457 aaKnown RBP10.45□□□□□ -0.74
CFDP1-208ENST00000569341 DNAJC5Q9H3Z4 198 aa10.45□□□□□ -0.74
CFDP1-208ENST00000569341 PSDA5PKW4 1024 aaPredicted RBP10.44□□□□□ -0.74
CFDP1-208ENST00000569341 DMRTA1Q5VZB9 504 aa10.43□□□□□ -0.74
CFDP1-208ENST00000569341 ADGRD1Q6QNK2 874 aa10.43□□□□□ -0.74
CFDP1-208ENST00000569341 PSEN2P49810 448 aa10.41□□□□□ -0.74
CFDP1-208ENST00000569341 HRO43593 1189 aa10.39□□□□□ -0.75
CFDP1-208ENST00000569341 TK2O00142 265 aa10.38□□□□□ -0.75
CFDP1-208ENST00000569341 OXER1Q8TDS5 423 aa10.38□□□□□ -0.75
CFDP1-208ENST00000569341 TBC1D12O60347 775 aa10.37□□□□□ -0.75
CFDP1-208ENST00000569341 CRISPLD2Q9H0B8 497 aa10.37□□□□□ -0.75
CFDP1-208ENST00000569341 PPP4R3BQ5MIZ7 849 aa10.35□□□□□ -0.75
CFDP1-208ENST00000569341 HCSTQ9UBK5 93 aa10.34□□□□□ -0.75
CFDP1-208ENST00000569341 NCKAP5LQ9HCH0 1330 aa10.33□□□□□ -0.76
CFDP1-208ENST00000569341 UPF1Q92900 1129 aaKnown RBP eCLIP10.32□□□□□ -0.76
CFDP1-208ENST00000569341 PPP1R15BQ5SWA1 713 aa10.3□□□□□ -0.76
CFDP1-208ENST00000569341 PLA2G2EQ9NZK7 142 aa10.3□□□□□ -0.76
CFDP1-208ENST00000569341 KCNK17Q96T54 332 aa10.29□□□□□ -0.76
CFDP1-208ENST00000569341 RYDENQ9NUL5 291 aaKnown RBP10.29□□□□□ -0.76
CFDP1-208ENST00000569341 GTPBP6O43824 516 aaPredicted RBP10.28□□□□□ -0.76
CFDP1-208ENST00000569341 VPS9D1Q9Y2B5 631 aa10.27□□□□□ -0.77
CFDP1-208ENST00000569341 ZNF454Q8N9F8 522 aa10.26□□□□□ -0.77
CFDP1-208ENST00000569341 ANO8Q9HCE9 1232 aaPredicted RBP10.26□□□□□ -0.77
CFDP1-208ENST00000569341 PDE4AP27815 886 aa10.25□□□□□ -0.77
CFDP1-208ENST00000569341 FOSBP53539 338 aa10.25□□□□□ -0.77
CFDP1-208ENST00000569341 KCTD12Q96CX2 325 aaKnown RBP10.25□□□□□ -0.77
CFDP1-208ENST00000569341 BCL2L12Q9HB09 334 aa10.25□□□□□ -0.77
CFDP1-208ENST00000569341 SLC4A5Q9BY07 1137 aa10.22□□□□□ -0.77
CFDP1-208ENST00000569341 BHMG1C9JSJ3 638 aaPredicted RBP10.2□□□□□ -0.78
CFDP1-208ENST00000569341 KCNH8Q96L42 1107 aa10.2□□□□□ -0.78
CFDP1-208ENST00000569341 LARP6Q9BRS8 491 aaKnown RBP10.2□□□□□ -0.78
CFDP1-208ENST00000569341 EVI5O60447 810 aa10.19□□□□□ -0.78
CFDP1-208ENST00000569341 MFSD10Q14728 455 aa10.19□□□□□ -0.78
CFDP1-208ENST00000569341 JPH4Q96JJ6 628 aa10.18□□□□□ -0.78
CFDP1-208ENST00000569341 STAC3Q96MF2 364 aa10.18□□□□□ -0.78
CFDP1-208ENST00000569341 ZBED2Q9BTP6 218 aa10.18□□□□□ -0.78
CFDP1-208ENST00000569341 PTPREP23469 700 aa10.17□□□□□ -0.78
CFDP1-208ENST00000569341 DDX27Q96GQ7 796 aaKnown RBP10.17□□□□□ -0.78
CFDP1-208ENST00000569341 ADAM33Q9BZ11 813 aa10.17□□□□□ -0.78
CFDP1-208ENST00000569341 EMILIN3Q9NT22 766 aa10.16□□□□□ -0.78
CFDP1-208ENST00000569341 ZDHHC16Q969W1 377 aa10.15□□□□□ -0.78
CFDP1-208ENST00000569341 PTPN5P54829 565 aa10.14□□□□□ -0.79
CFDP1-208ENST00000569341 CADPS2Q86UW7 1296 aa10.14□□□□□ -0.79
CFDP1-208ENST00000569341 MAP3K9P80192 1104 aa10.12□□□□□ -0.79
CFDP1-208ENST00000569341 THSD4Q6ZMP0 1018 aa10.12□□□□□ -0.79
CFDP1-208ENST00000569341 PCDHGA10Q9Y5H3 936 aa10.1□□□□□ -0.79
CFDP1-208ENST00000569341 MRPL50Q8N5N7 158 aaKnown RBP10.07□□□□□ -0.8
CFDP1-208ENST00000569341 WNT2BQ93097 391 aa10.07□□□□□ -0.8
CFDP1-208ENST00000569341 COL9A1P20849 921 aa10.06□□□□□ -0.8
CFDP1-208ENST00000569341 IFFO2Q5TF58 517 aa10.05□□□□□ -0.8
CFDP1-208ENST00000569341 GOLGA8CPA6NN73 597 aa10.04□□□□□ -0.8
CFDP1-208ENST00000569341 PPP1R3GB7ZBB8 358 aa10.04□□□□□ -0.8
CFDP1-208ENST00000569341 PROX2Q3B8N5 592 aa10.04□□□□□ -0.8
CFDP1-208ENST00000569341 DCAF8L2P0C7V8 631 aa10.03□□□□□ -0.8
CFDP1-208ENST00000569341 NBPF3Q9H094 633 aa10.03□□□□□ -0.8
CFDP1-208ENST00000569341 PHF14O94880 888 aa10.02□□□□□ -0.81
CFDP1-208ENST00000569341 CAMK2BQ13554 666 aa10.02□□□□□ -0.81
CFDP1-208ENST00000569341 RABGEF1Q9UJ41 708 aa10.02□□□□□ -0.81
CFDP1-208ENST00000569341 TYW1BQ6NUM6 668 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms