RNA–Protein interactions for RNA: ENST00000569128.1

CDH11-216, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-216ENST00000569128 OCEL1Q9H607 264 aa14.63□□□□□ -0.07
CDH11-216ENST00000569128 PELP1Q8IZL8 1130 aaKnown RBP14.61□□□□□ -0.07
CDH11-216ENST00000569128 E2F4Q16254 413 aa14.6□□□□□ -0.07
CDH11-216ENST00000569128 TPRNQ4KMQ1 711 aa14.6□□□□□ -0.07
CDH11-216ENST00000569128 UNC13AQ9UPW8 1703 aa14.6□□□□□ -0.07
CDH11-216ENST00000569128 MICALL2Q8IY33 904 aa14.59□□□□□ -0.07
CDH11-216ENST00000569128 PLCG2P16885 1265 aa14.58□□□□□ -0.08
CDH11-216ENST00000569128 MFSD10Q14728 455 aa14.57□□□□□ -0.08
CDH11-216ENST00000569128 DDX27Q96GQ7 796 aaKnown RBP14.56□□□□□ -0.08
CDH11-216ENST00000569128 BOLA1Q9Y3E2 137 aa14.53□□□□□ -0.08
CDH11-216ENST00000569128 SEC24BO95487 1268 aa14.52□□□□□ -0.09
CDH11-216ENST00000569128 COLQQ9Y215 455 aaPredicted RBP14.52□□□□□ -0.09
CDH11-216ENST00000569128 G3V3G9 751 aa14.51□□□□□ -0.09
CDH11-216ENST00000569128 ARHGEF1Q92888 912 aaKnown RBP14.51□□□□□ -0.09
CDH11-216ENST00000569128 GPHNQ9NQX3 736 aaPredicted RBP14.51□□□□□ -0.09
CDH11-216ENST00000569128 SP7Q8TDD2 431 aaPredicted RBP14.5□□□□□ -0.09
CDH11-216ENST00000569128 BICRAQ9NZM4 1560 aa14.5□□□□□ -0.09
CDH11-216ENST00000569128 SLC39A7Q92504 469 aa14.49□□□□□ -0.09
CDH11-216ENST00000569128 POTEIP0CG38 1075 aa14.48□□□□□ -0.09
CDH11-216ENST00000569128 TMEM121BQ9BXQ6 578 aaPredicted RBP14.48□□□□□ -0.09
CDH11-216ENST00000569128 PPP1R15BQ5SWA1 713 aa14.47□□□□□ -0.09
CDH11-216ENST00000569128 TMC2Q8TDI7 906 aa14.46□□□□□ -0.09
CDH11-216ENST00000569128 L3MBTL3Q96JM7 780 aaPredicted RBP14.46□□□□□ -0.09
CDH11-216ENST00000569128 C7P10643 843 aa14.45□□□□□ -0.1
CDH11-216ENST00000569128 POTEFA5A3E0 1075 aa14.44□□□□□ -0.1
CDH11-216ENST00000569128 CAMK2BQ13554 666 aa14.43□□□□□ -0.1
CDH11-216ENST00000569128 DSG2Q14126 1118 aa14.43□□□□□ -0.1
CDH11-216ENST00000569128 METRNQ9UJH8 293 aa14.43□□□□□ -0.1
CDH11-216ENST00000569128 C2orf72A6NCS6 295 aa14.4□□□□□ -0.1
CDH11-216ENST00000569128 SEMA3EO15041 775 aa14.38□□□□□ -0.11
CDH11-216ENST00000569128 FOXK1P85037 733 aa14.37□□□□□ -0.11
CDH11-216ENST00000569128 KIF3CO14782 793 aa14.35□□□□□ -0.11
CDH11-216ENST00000569128 ARIH1Q9Y4X5 557 aaPredicted RBP14.35□□□□□ -0.11
CDH11-216ENST00000569128 TMEM92Q6UXU6 159 aa14.34□□□□□ -0.11
CDH11-216ENST00000569128 PLPP6Q8IY26 295 aa14.34□□□□□ -0.11
CDH11-216ENST00000569128 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.33□□□□□ -0.12
CDH11-216ENST00000569128 EMILIN3Q9NT22 766 aa14.33□□□□□ -0.12
CDH11-216ENST00000569128 TESPA1A2RU30 521 aaPredicted RBP14.31□□□□□ -0.12
CDH11-216ENST00000569128 LMOD2Q6P5Q4 547 aa14.31□□□□□ -0.12
CDH11-216ENST00000569128 TULP1O00294 542 aaPredicted RBP14.3□□□□□ -0.12
CDH11-216ENST00000569128 DPYSL4O14531 572 aa14.29□□□□□ -0.12
CDH11-216ENST00000569128 C3orf67Q6ZVT6 689 aa14.27□□□□□ -0.13
CDH11-216ENST00000569128 CECR2Q9BXF3 1484 aa14.23□□□□□ -0.13
CDH11-216ENST00000569128 SMYD5Q6GMV2 418 aa14.2□□□□□ -0.14
CDH11-216ENST00000569128 UPF1Q92900 1129 aaKnown RBP eCLIP14.2□□□□□ -0.14
CDH11-216ENST00000569128 MLLT3P42568 568 aaPredicted RBP14.19□□□□□ -0.14
CDH11-216ENST00000569128 SPDYE16A6NNV3 312 aaPredicted RBP14.18□□□□□ -0.14
CDH11-216ENST00000569128 PDIA6Q15084 440 aa14.18□□□□□ -0.14
CDH11-216ENST00000569128 MAP3K9P80192 1104 aa14.17□□□□□ -0.14
CDH11-216ENST00000569128 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.15□□□□□ -0.14
CDH11-216ENST00000569128 OXER1Q8TDS5 423 aa14.13□□□□□ -0.15
CDH11-216ENST00000569128 ZC3H15Q8WU90 426 aaKnown RBP14.11□□□□□ -0.15
CDH11-216ENST00000569128 MROH2BQ7Z745 1585 aa14.09□□□□□ -0.15
CDH11-216ENST00000569128 TIMELESSQ9UNS1 1208 aa14.09□□□□□ -0.15
CDH11-216ENST00000569128 RBM26Q5T8P6 1007 aaKnown RBP14.08□□□□□ -0.16
CDH11-216ENST00000569128 POTEJP0CG39 1038 aa14.07□□□□□ -0.16
CDH11-216ENST00000569128 EIF4G1Q04637 1599 aaKnown RBP14.05□□□□□ -0.16
CDH11-216ENST00000569128 POTEB2H3BUK9 544 aa14.05□□□□□ -0.16
CDH11-216ENST00000569128 BAZ1AQ9NRL2 1556 aaPredicted RBP14.05□□□□□ -0.16
CDH11-216ENST00000569128 SMARCA4P51532 1647 aa14.04□□□□□ -0.16
CDH11-216ENST00000569128 GRXCR2A6NFK2 248 aa14.04□□□□□ -0.16
CDH11-216ENST00000569128 TBC1D12O60347 775 aa14.04□□□□□ -0.16
CDH11-216ENST00000569128 PTCD2Q8WV60 388 aaKnown RBP14.04□□□□□ -0.16
CDH11-216ENST00000569128 RSF1Q96T23 1441 aaPredicted RBP14.04□□□□□ -0.16
CDH11-216ENST00000569128 SUPT5HO00267 1087 aaKnown RBP14.03□□□□□ -0.16
CDH11-216ENST00000569128 EVI5O60447 810 aa14.02□□□□□ -0.17
CDH11-216ENST00000569128 SLC34A2O95436 690 aa14.01□□□□□ -0.17
CDH11-216ENST00000569128 GPIHBP1Q8IV16 184 aa14□□□□□ -0.17
CDH11-216ENST00000569128 ERICH6Q7L0X2 663 aa13.99□□□□□ -0.17
CDH11-216ENST00000569128 DDX12PQ92771 950 aa13.99□□□□□ -0.17
CDH11-216ENST00000569128 GTF3C3Q9Y5Q9 886 aa13.97□□□□□ -0.17
CDH11-216ENST00000569128 ZMYND10O75800 440 aa13.96□□□□□ -0.17
CDH11-216ENST00000569128 PTGER2P43116 358 aa13.96□□□□□ -0.17
CDH11-216ENST00000569128 WIZO95785 1651 aa13.95□□□□□ -0.18
CDH11-216ENST00000569128 ZNF316A6NFI3 1004 aaPredicted RBP13.95□□□□□ -0.18
CDH11-216ENST00000569128 SLAIN1Q8ND83 568 aa13.94□□□□□ -0.18
CDH11-216ENST00000569128 PCDHGA4Q9Y5G9 962 aa13.94□□□□□ -0.18
CDH11-216ENST00000569128 OSBPP22059 807 aa13.93□□□□□ -0.18
CDH11-216ENST00000569128 ARXQ96QS3 562 aa13.93□□□□□ -0.18
CDH11-216ENST00000569128 SLC24A3Q9HC58 644 aa13.93□□□□□ -0.18
CDH11-216ENST00000569128 SCUBE2Q9NQ36 999 aa13.93□□□□□ -0.18
CDH11-216ENST00000569128 CC2D2AQ9P2K1 1620 aa13.93□□□□□ -0.18
CDH11-216ENST00000569128 BARGINQ6ZT62 677 aa13.91□□□□□ -0.18
CDH11-216ENST00000569128 ANO8Q9HCE9 1232 aaPredicted RBP13.91□□□□□ -0.18
CDH11-216ENST00000569128 ATAD2BQ9ULI0 1458 aa13.91□□□□□ -0.18
CDH11-216ENST00000569128 MAMSTRQ6ZN01 415 aa13.9□□□□□ -0.18
CDH11-216ENST00000569128 NUTM2FA1L443 756 aa13.89□□□□□ -0.19
CDH11-216ENST00000569128 PRIM1P49642 420 aaKnown RBP13.87□□□□□ -0.19
CDH11-216ENST00000569128 PEG3Q9GZU2 1588 aa13.86□□□□□ -0.19
CDH11-216ENST00000569128 GPR37O15354 613 aa13.85□□□□□ -0.19
CDH11-216ENST00000569128 HOXB3P14651 431 aaPredicted RBP13.85□□□□□ -0.19
CDH11-216ENST00000569128 DOK7Q18PE1 504 aa13.85□□□□□ -0.19
CDH11-216ENST00000569128 SMARCA2P51531 1590 aa13.84□□□□□ -0.19
CDH11-216ENST00000569128 KRI1Q8N9T8 703 aaKnown RBP13.84□□□□□ -0.19
CDH11-216ENST00000569128 DAXXQ9UER7 740 aaPredicted RBP13.84□□□□□ -0.19
CDH11-216ENST00000569128 NCAPD3P42695 1498 aa13.82□□□□□ -0.2
CDH11-216ENST00000569128 KHSRPQ92945 711 aaKnown RBP eCLIP13.82□□□□□ -0.2
CDH11-216ENST00000569128 KDM4FA0A1W2PPD8 638 aa13.81□□□□□ -0.2
CDH11-216ENST00000569128 ARSIQ5FYB1 569 aa13.81□□□□□ -0.2
CDH11-216ENST00000569128 PHF14O94880 888 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms