RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 SLAIN1Q8ND83 568 aa8.82□□□□□ -1
HMGB1P6-201ENST00000569046 KIF3CO14782 793 aa8.79□□□□□ -1
HMGB1P6-201ENST00000569046 TSHZ2Q9NRE2 1034 aa8.79□□□□□ -1
HMGB1P6-201ENST00000569046 C2orf72A6NCS6 295 aa8.78□□□□□ -1
HMGB1P6-201ENST00000569046 NCKAP5LQ9HCH0 1330 aa8.78□□□□□ -1
HMGB1P6-201ENST00000569046 CRISPLD2Q9H0B8 497 aa8.76□□□□□ -1.01
HMGB1P6-201ENST00000569046 GPHNQ9NQX3 736 aaPredicted RBP8.74□□□□□ -1.01
HMGB1P6-201ENST00000569046 TMC2Q8TDI7 906 aa8.73□□□□□ -1.01
HMGB1P6-201ENST00000569046 HAP1P54257 671 aaPredicted RBP8.71□□□□□ -1.02
HMGB1P6-201ENST00000569046 DSG2Q14126 1118 aa8.71□□□□□ -1.02
HMGB1P6-201ENST00000569046 LARP6Q9BRS8 491 aaKnown RBP8.71□□□□□ -1.02
HMGB1P6-201ENST00000569046 PDE4AP27815 886 aa8.7□□□□□ -1.02
HMGB1P6-201ENST00000569046 FOXK1P85037 733 aa8.7□□□□□ -1.02
HMGB1P6-201ENST00000569046 HOXB3P14651 431 aaPredicted RBP8.69□□□□□ -1.02
HMGB1P6-201ENST00000569046 MFSD10Q14728 455 aa8.68□□□□□ -1.02
HMGB1P6-201ENST00000569046 PLPP6Q8IY26 295 aa8.68□□□□□ -1.02
HMGB1P6-201ENST00000569046 PPP1R15BQ5SWA1 713 aa8.66□□□□□ -1.02
HMGB1P6-201ENST00000569046 DDX27Q96GQ7 796 aaKnown RBP8.66□□□□□ -1.02
HMGB1P6-201ENST00000569046 LCE2DQ5TA82 110 aaPredicted RBP8.65□□□□□ -1.02
HMGB1P6-201ENST00000569046 KDM2AQ9Y2K7 1162 aa8.63□□□□□ -1.03
HMGB1P6-201ENST00000569046 SNPHO15079 494 aa8.62□□□□□ -1.03
HMGB1P6-201ENST00000569046 FAM163AQ96GL9 167 aaPredicted RBP8.62□□□□□ -1.03
HMGB1P6-201ENST00000569046 ST18O60284 1047 aa8.61□□□□□ -1.03
HMGB1P6-201ENST00000569046 DOK7Q18PE1 504 aa8.6□□□□□ -1.03
HMGB1P6-201ENST00000569046 SLC34A2O95436 690 aa8.59□□□□□ -1.03
HMGB1P6-201ENST00000569046 EMILIN3Q9NT22 766 aa8.59□□□□□ -1.03
HMGB1P6-201ENST00000569046 CAMK2BQ13554 666 aa8.58□□□□□ -1.04
HMGB1P6-201ENST00000569046 GPR153Q6NV75 609 aa8.58□□□□□ -1.04
HMGB1P6-201ENST00000569046 ARSIQ5FYB1 569 aa8.57□□□□□ -1.04
HMGB1P6-201ENST00000569046 ZNF710Q8N1W2 664 aa8.57□□□□□ -1.04
HMGB1P6-201ENST00000569046 PTCD2Q8WV60 388 aaKnown RBP8.57□□□□□ -1.04
HMGB1P6-201ENST00000569046 UPF1Q92900 1129 aaKnown RBP eCLIP8.57□□□□□ -1.04
HMGB1P6-201ENST00000569046 KHSRPQ92945 711 aaKnown RBP eCLIP8.57□□□□□ -1.04
HMGB1P6-201ENST00000569046 WDR70Q9NW82 654 aa8.57□□□□□ -1.04
HMGB1P6-201ENST00000569046 OXER1Q8TDS5 423 aa8.56□□□□□ -1.04
HMGB1P6-201ENST00000569046 PCDHGA4Q9Y5G9 962 aa8.56□□□□□ -1.04
HMGB1P6-201ENST00000569046 RIMBP2O15034 1052 aa8.54□□□□□ -1.04
HMGB1P6-201ENST00000569046 HOXB1P14653 301 aaPredicted RBP8.54□□□□□ -1.04
HMGB1P6-201ENST00000569046 E2F4Q16254 413 aa8.54□□□□□ -1.04
HMGB1P6-201ENST00000569046 VSIG10Q8N0Z9 540 aa8.54□□□□□ -1.04
HMGB1P6-201ENST00000569046 ZSWIM6Q9HCJ5 1215 aa8.54□□□□□ -1.04
HMGB1P6-201ENST00000569046 MARVELD3Q96A59 401 aa8.53□□□□□ -1.04
HMGB1P6-201ENST00000569046 KDM4FA0A1W2PPD8 638 aa8.52□□□□□ -1.05
HMGB1P6-201ENST00000569046 NUDT7P0C024 238 aa8.51□□□□□ -1.05
HMGB1P6-201ENST00000569046 KCNV2Q8TDN2 545 aa8.51□□□□□ -1.05
HMGB1P6-201ENST00000569046 DPYSL4O14531 572 aa8.5□□□□□ -1.05
HMGB1P6-201ENST00000569046 MAP3K9P80192 1104 aa8.48□□□□□ -1.05
HMGB1P6-201ENST00000569046 TBC1D12O60347 775 aa8.47□□□□□ -1.05
HMGB1P6-201ENST00000569046 SLC24A1O60721 1099 aa8.47□□□□□ -1.05
HMGB1P6-201ENST00000569046 EMP3P54852 163 aa8.47□□□□□ -1.05
HMGB1P6-201ENST00000569046 POTEB3A0JP26 581 aa8.46□□□□□ -1.06
HMGB1P6-201ENST00000569046 POTEBQ6S5H4 581 aa8.46□□□□□ -1.06
HMGB1P6-201ENST00000569046 ARIH1Q9Y4X5 557 aaPredicted RBP8.46□□□□□ -1.06
HMGB1P6-201ENST00000569046 EVI5O60447 810 aa8.45□□□□□ -1.06
HMGB1P6-201ENST00000569046 LHX6Q9UPM6 363 aa8.45□□□□□ -1.06
HMGB1P6-201ENST00000569046 FAM205CA6NFA0 338 aa8.44□□□□□ -1.06
HMGB1P6-201ENST00000569046 POTEMA6NI47 508 aa8.44□□□□□ -1.06
HMGB1P6-201ENST00000569046 POTEGQ6S5H5 508 aa8.44□□□□□ -1.06
HMGB1P6-201ENST00000569046 ANO8Q9HCE9 1232 aaPredicted RBP8.44□□□□□ -1.06
HMGB1P6-201ENST00000569046 ZNF316A6NFI3 1004 aaPredicted RBP8.43□□□□□ -1.06
HMGB1P6-201ENST00000569046 PDIA6Q15084 440 aa8.42□□□□□ -1.06
HMGB1P6-201ENST00000569046 P3H3Q8IVL6 736 aa8.42□□□□□ -1.06
HMGB1P6-201ENST00000569046 ARHGEF1Q92888 912 aaKnown RBP8.42□□□□□ -1.06
HMGB1P6-201ENST00000569046 ERBB3P21860 1342 aa8.42□□□□□ -1.06
HMGB1P6-201ENST00000569046 VARS2Q5ST30 1063 aaKnown RBP8.41□□□□□ -1.06
HMGB1P6-201ENST00000569046 HS3ST6Q96QI5 342 aa8.41□□□□□ -1.06
HMGB1P6-201ENST00000569046 SPDYE16A6NNV3 312 aaPredicted RBP8.38□□□□□ -1.07
HMGB1P6-201ENST00000569046 PTGER2P43116 358 aa8.36□□□□□ -1.07
HMGB1P6-201ENST00000569046 FOSBP53539 338 aa8.36□□□□□ -1.07
HMGB1P6-201ENST00000569046 DDX12PQ92771 950 aa8.36□□□□□ -1.07
HMGB1P6-201ENST00000569046 SEMA3EO15041 775 aa8.35□□□□□ -1.07
HMGB1P6-201ENST00000569046 PCDHGA10Q9Y5H3 936 aa8.35□□□□□ -1.07
HMGB1P6-201ENST00000569046 MLLT3P42568 568 aaPredicted RBP8.34□□□□□ -1.07
HMGB1P6-201ENST00000569046 POTEEQ6S8J3 1075 aa8.34□□□□□ -1.07
HMGB1P6-201ENST00000569046 ZNF454Q8N9F8 522 aa8.34□□□□□ -1.07
HMGB1P6-201ENST00000569046 JPH4Q96JJ6 628 aa8.34□□□□□ -1.07
HMGB1P6-201ENST00000569046 ZNF687Q8N1G0 1237 aa8.33□□□□□ -1.08
HMGB1P6-201ENST00000569046 PSDA5PKW4 1024 aaPredicted RBP8.32□□□□□ -1.08
HMGB1P6-201ENST00000569046 GRXCR2A6NFK2 248 aa8.32□□□□□ -1.08
HMGB1P6-201ENST00000569046 PHF14O94880 888 aa8.32□□□□□ -1.08
HMGB1P6-201ENST00000569046 PRIM1P49642 420 aaKnown RBP8.32□□□□□ -1.08
HMGB1P6-201ENST00000569046 CDAN1Q8IWY9 1227 aa8.32□□□□□ -1.08
HMGB1P6-201ENST00000569046 PPP4R3BQ5MIZ7 849 aa8.31□□□□□ -1.08
HMGB1P6-201ENST00000569046 ADAM33Q9BZ11 813 aa8.31□□□□□ -1.08
HMGB1P6-201ENST00000569046 NBR1Q14596 966 aa8.3□□□□□ -1.08
HMGB1P6-201ENST00000569046 ZDHHC16Q969W1 377 aa8.3□□□□□ -1.08
HMGB1P6-201ENST00000569046 KRTAP3-3Q9BYR6 98 aa8.3□□□□□ -1.08
HMGB1P6-201ENST00000569046 KRTAP3-2Q9BYR7 98 aa8.3□□□□□ -1.08
HMGB1P6-201ENST00000569046 AXIN2Q9Y2T1 843 aa8.3□□□□□ -1.08
HMGB1P6-201ENST00000569046 OSBPP22059 807 aa8.29□□□□□ -1.08
HMGB1P6-201ENST00000569046 TESPA1A2RU30 521 aaPredicted RBP8.28□□□□□ -1.08
HMGB1P6-201ENST00000569046 TYW1BQ6NUM6 668 aa8.28□□□□□ -1.08
HMGB1P6-201ENST00000569046 PSEN2P49810 448 aa8.27□□□□□ -1.09
HMGB1P6-201ENST00000569046 RBM33Q96EV2 1170 aaKnown RBP8.27□□□□□ -1.09
HMGB1P6-201ENST00000569046 EPAS1Q99814 870 aa8.27□□□□□ -1.09
HMGB1P6-201ENST00000569046 BCL2L12Q9HB09 334 aa8.27□□□□□ -1.09
HMGB1P6-201ENST00000569046 EN1Q05925 392 aaPredicted RBP8.26□□□□□ -1.09
HMGB1P6-201ENST00000569046 FBXW7Q969H0 707 aa8.25□□□□□ -1.09
HMGB1P6-201ENST00000569046 KCNK17Q96T54 332 aa8.25□□□□□ -1.09
HMGB1P6-201ENST00000569046 ARHGAP33O14559 1287 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms