RNA–Protein interactions for RNA: ENST00000569001.1

BBS4-215, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 3

Gene BBS4, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-215ENST00000569001 MARVELD3Q96A59 401 aa8.87□□□□□ -0.99
BBS4-215ENST00000569001 SNPHO15079 494 aa8.84□□□□□ -0.99
BBS4-215ENST00000569001 KIF3CO14782 793 aa8.83□□□□□ -1
BBS4-215ENST00000569001 TMC2Q8TDI7 906 aa8.81□□□□□ -1
BBS4-215ENST00000569001 BBXQ8WY36 941 aaPredicted RBP8.81□□□□□ -1
BBS4-215ENST00000569001 ZNF710Q8N1W2 664 aa8.79□□□□□ -1
BBS4-215ENST00000569001 KHSRPQ92945 711 aaKnown RBP eCLIP8.79□□□□□ -12e-7■□□□□ 9.8
BBS4-215ENST00000569001 DOK7Q18PE1 504 aa8.78□□□□□ -1
BBS4-215ENST00000569001 CADPS2Q86UW7 1296 aa8.78□□□□□ -1
BBS4-215ENST00000569001 RYDENQ9NUL5 291 aaKnown RBP8.78□□□□□ -1
BBS4-215ENST00000569001 EMP3P54852 163 aa8.77□□□□□ -1.01
BBS4-215ENST00000569001 POTEB3A0JP26 581 aa8.76□□□□□ -1.01
BBS4-215ENST00000569001 POTEBQ6S5H4 581 aa8.76□□□□□ -1.01
BBS4-215ENST00000569001 NCKAP5LQ9HCH0 1330 aa8.76□□□□□ -1.01
BBS4-215ENST00000569001 DSG2Q14126 1118 aa8.75□□□□□ -1.01
BBS4-215ENST00000569001 ARSIQ5FYB1 569 aa8.75□□□□□ -1.01
BBS4-215ENST00000569001 PAXIP1Q6ZW49 1069 aaPredicted RBP8.75□□□□□ -1.01
BBS4-215ENST00000569001 CFAP44Q96MT7 982 aa8.75□□□□□ -1.01
BBS4-215ENST00000569001 FAM205CA6NFA0 338 aa8.74□□□□□ -1.01
BBS4-215ENST00000569001 GPHNQ9NQX3 736 aaPredicted RBP8.74□□□□□ -1.01
BBS4-215ENST00000569001 HOXB1P14653 301 aaPredicted RBP8.73□□□□□ -1.01
BBS4-215ENST00000569001 PLPP6Q8IY26 295 aa8.73□□□□□ -1.01
BBS4-215ENST00000569001 GPR153Q6NV75 609 aa8.72□□□□□ -1.01
BBS4-215ENST00000569001 CRISPLD2Q9H0B8 497 aa8.72□□□□□ -1.01
BBS4-215ENST00000569001 RIMBP2O15034 1052 aa8.71□□□□□ -1.02
BBS4-215ENST00000569001 CDAN1Q8IWY9 1227 aa8.71□□□□□ -1.02
BBS4-215ENST00000569001 SPRYD3Q8NCJ5 442 aa8.71□□□□□ -1.02
BBS4-215ENST00000569001 HS3ST6Q96QI5 342 aa8.71□□□□□ -1.02
BBS4-215ENST00000569001 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.71□□□□□ -1.02
BBS4-215ENST00000569001 FOXK1P85037 733 aa8.7□□□□□ -1.02
BBS4-215ENST00000569001 LARP6Q9BRS8 491 aaKnown RBP8.7□□□□□ -1.02
BBS4-215ENST00000569001 NUDT7P0C024 238 aa8.69□□□□□ -1.02
BBS4-215ENST00000569001 PCDHGA4Q9Y5G9 962 aa8.68□□□□□ -1.02
BBS4-215ENST00000569001 ERBB3P21860 1342 aa8.67□□□□□ -1.02
BBS4-215ENST00000569001 PPP1R15BQ5SWA1 713 aa8.67□□□□□ -1.02
BBS4-215ENST00000569001 UPF1Q92900 1129 aaKnown RBP eCLIP8.67□□□□□ -1.02
BBS4-215ENST00000569001 VARS2Q5ST30 1063 aaKnown RBP8.66□□□□□ -1.02
BBS4-215ENST00000569001 ZSWIM6Q9HCJ5 1215 aa8.66□□□□□ -1.02
BBS4-215ENST00000569001 PDE4AP27815 886 aa8.65□□□□□ -1.02
BBS4-215ENST00000569001 SLC34A2O95436 690 aa8.64□□□□□ -1.03
BBS4-215ENST00000569001 DDX27Q96GQ7 796 aaKnown RBP8.64□□□□□ -1.03
BBS4-215ENST00000569001 PLSCR2Q9NRY7 297 aa8.63□□□□□ -1.03
BBS4-215ENST00000569001 PTCD2Q8WV60 388 aaKnown RBP8.61□□□□□ -1.03
BBS4-215ENST00000569001 LHX6Q9UPM6 363 aa8.61□□□□□ -1.03
BBS4-215ENST00000569001 ZNF316A6NFI3 1004 aaPredicted RBP8.6□□□□□ -1.03
BBS4-215ENST00000569001 MFSD10Q14728 455 aa8.6□□□□□ -1.03
BBS4-215ENST00000569001 OXER1Q8TDS5 423 aa8.59□□□□□ -1.03
BBS4-215ENST00000569001 KRTAP3-3Q9BYR6 98 aa8.59□□□□□ -1.03
BBS4-215ENST00000569001 KRTAP3-2Q9BYR7 98 aa8.59□□□□□ -1.03
BBS4-215ENST00000569001 TSHZ2Q9NRE2 1034 aa8.59□□□□□ -1.03
BBS4-215ENST00000569001 EMILIN3Q9NT22 766 aa8.59□□□□□ -1.03
BBS4-215ENST00000569001 KDM4FA0A1W2PPD8 638 aa8.57□□□□□ -1.04
BBS4-215ENST00000569001 PCDH10Q9P2E7 1040 aa8.57□□□□□ -1.04
BBS4-215ENST00000569001 TBC1D12O60347 775 aa8.53□□□□□ -1.04
BBS4-215ENST00000569001 AXIN2Q9Y2T1 843 aa8.53□□□□□ -1.04
BBS4-215ENST00000569001 POTEEQ6S8J3 1075 aa8.52□□□□□ -1.05
BBS4-215ENST00000569001 ZNF687Q8N1G0 1237 aa8.52□□□□□ -1.05
BBS4-215ENST00000569001 DPYSL4O14531 572 aa8.51□□□□□ -1.05
BBS4-215ENST00000569001 EVI5O60447 810 aa8.5□□□□□ -1.05
BBS4-215ENST00000569001 MAP3K9P80192 1104 aa8.5□□□□□ -1.05
BBS4-215ENST00000569001 CAMK2BQ13554 666 aa8.49□□□□□ -1.05
BBS4-215ENST00000569001 PLCB2Q00722 1185 aa8.48□□□□□ -1.05
BBS4-215ENST00000569001 SPNS2Q8IVW8 549 aa8.48□□□□□ -1.05
BBS4-215ENST00000569001 ZNF454Q8N9F8 522 aa8.47□□□□□ -1.05
BBS4-215ENST00000569001 ANKRD13DQ6ZTN6 518 aa8.46□□□□□ -1.06
BBS4-215ENST00000569001 PSEN2P49810 448 aa8.45□□□□□ -1.06
BBS4-215ENST00000569001 WDR70Q9NW82 654 aa8.45□□□□□ -1.06
BBS4-215ENST00000569001 E2F4Q16254 413 aa8.44□□□□□ -1.06
BBS4-215ENST00000569001 PPP4R3BQ5MIZ7 849 aa8.44□□□□□ -1.06
BBS4-215ENST00000569001 DMRTA1Q5VZB9 504 aa8.43□□□□□ -1.06
BBS4-215ENST00000569001 ANO8Q9HCE9 1232 aaPredicted RBP8.43□□□□□ -1.06
BBS4-215ENST00000569001 FOSBP53539 338 aa8.42□□□□□ -1.06
BBS4-215ENST00000569001 LSM11P83369 360 aaKnown RBP eCLIP8.42□□□□□ -1.06
BBS4-215ENST00000569001 MMRN1Q13201 1228 aa8.42□□□□□ -1.06
BBS4-215ENST00000569001 KCNK17Q96T54 332 aa8.42□□□□□ -1.06
BBS4-215ENST00000569001 HAP1P54257 671 aaPredicted RBP8.41□□□□□ -1.06
BBS4-215ENST00000569001 PSDA5PKW4 1024 aaPredicted RBP8.4□□□□□ -1.06
BBS4-215ENST00000569001 DDX12PQ92771 950 aa8.4□□□□□ -1.06
BBS4-215ENST00000569001 ADAM33Q9BZ11 813 aa8.4□□□□□ -1.06
BBS4-215ENST00000569001 ARHGAP33O14559 1287 aa8.39□□□□□ -1.07
BBS4-215ENST00000569001 JPH4Q96JJ6 628 aa8.39□□□□□ -1.07
BBS4-215ENST00000569001 PCDHGA10Q9Y5H3 936 aa8.39□□□□□ -1.07
BBS4-215ENST00000569001 PBX2P40425 430 aa8.38□□□□□ -1.07
BBS4-215ENST00000569001 KCNV2Q8TDN2 545 aa8.37□□□□□ -1.07
BBS4-215ENST00000569001 ZDHHC16Q969W1 377 aa8.36□□□□□ -1.07
BBS4-215ENST00000569001 RBM33Q96EV2 1170 aaKnown RBP8.36□□□□□ -1.07
BBS4-215ENST00000569001 PDIA6Q15084 440 aa8.35□□□□□ -1.07
BBS4-215ENST00000569001 BCL2L12Q9HB09 334 aa8.35□□□□□ -1.07
BBS4-215ENST00000569001 PRIM1P49642 420 aaKnown RBP8.34□□□□□ -1.07
BBS4-215ENST00000569001 ADGRD1Q6QNK2 874 aa8.34□□□□□ -1.07
BBS4-215ENST00000569001 GRXCR2A6NFK2 248 aa8.33□□□□□ -1.08
BBS4-215ENST00000569001 PHF14O94880 888 aa8.33□□□□□ -1.08
BBS4-215ENST00000569001 KDM2AQ9Y2K7 1162 aa8.33□□□□□ -1.08
BBS4-215ENST00000569001 COL9A1P20849 921 aa8.32□□□□□ -1.08
BBS4-215ENST00000569001 PTPREP23469 700 aa8.32□□□□□ -1.08
BBS4-215ENST00000569001 NBR1Q14596 966 aa8.32□□□□□ -1.08
BBS4-215ENST00000569001 TYW1BQ6NUM6 668 aa8.32□□□□□ -1.08
BBS4-215ENST00000569001 MYT1LQ9UL68 1186 aa8.31□□□□□ -1.08
BBS4-215ENST00000569001 TSR1Q2NL82 804 aaKnown RBP8.3□□□□□ -1.08
BBS4-215ENST00000569001 RNF166Q96A37 237 aaPredicted RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms