RNA–Protein interactions for RNA: ENST00000568977.1

CPNE7-209, Transcript of copine 7, humanhuman

TSL 5

Gene CPNE7, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-209ENST00000568977 ZFYVE16Q7Z3T8 1539 aa30.25■■■□□ 2.43
CPNE7-209ENST00000568977 SCAPERQ9BY12 1400 aa30.24■■■□□ 2.43
CPNE7-209ENST00000568977 HECW2Q9P2P5 1572 aa30.24■■■□□ 2.43
CPNE7-209ENST00000568977 ARHGAP5Q13017 1502 aa30.22■■■□□ 2.43
CPNE7-209ENST00000568977 MAGI2Q86UL8 1455 aa30.2■■■□□ 2.43
CPNE7-209ENST00000568977 YEATS2Q9ULM3 1422 aa30.2■■■□□ 2.42
CPNE7-209ENST00000568977 EFCAB2Q5VUJ9 269 aa30.19■■■□□ 2.42
CPNE7-209ENST00000568977 MADDQ8WXG6 1647 aa30.18■■■□□ 2.42
CPNE7-209ENST00000568977 ARID4BQ4LE39 1312 aaPredicted RBP30.18■■■□□ 2.42
CPNE7-209ENST00000568977 PREX2Q70Z35 1606 aa30.18■■■□□ 2.42
CPNE7-209ENST00000568977 CDC42BPBQ9Y5S2 1711 aa30.17■■■□□ 2.42
CPNE7-209ENST00000568977 PTPRMP28827 1452 aa30.16■■■□□ 2.42
CPNE7-209ENST00000568977 SIGLEC1Q9BZZ2 1709 aa30.15■■■□□ 2.42
CPNE7-209ENST00000568977 ZNF518AQ6AHZ1 1483 aa30.11■■■□□ 2.41
CPNE7-209ENST00000568977 KDM5CP41229 1560 aa30.1■■■□□ 2.41
CPNE7-209ENST00000568977 CDC42BPAQ5VT25 1732 aa30.09■■■□□ 2.41
CPNE7-209ENST00000568977 RIMS1Q86UR5 1692 aaKnown RBP30.08■■■□□ 2.41
CPNE7-209ENST00000568977 ABCC1P33527 1531 aa30.06■■■□□ 2.4
CPNE7-209ENST00000568977 CEP162Q5TB80 1403 aa30.05■■■□□ 2.4
CPNE7-209ENST00000568977 ITSN2Q9NZM3 1697 aa30.03■■■□□ 2.4
CPNE7-209ENST00000568977 C9orf84Q5VXU9 1444 aa30.03■■■□□ 2.4
CPNE7-209ENST00000568977 ATP10AO60312 1499 aa30.02■■■□□ 2.4
CPNE7-209ENST00000568977 FER1L4A9Z1Z3 1794 aa29.98■■■□□ 2.39
CPNE7-209ENST00000568977 ARHGEF12Q9NZN5 1544 aa29.98■■■□□ 2.39
CPNE7-209ENST00000568977 AFAP1Q8N556 730 aa29.98■■■□□ 2.39
CPNE7-209ENST00000568977 DIP2CQ9Y2E4 1556 aa29.97■■■□□ 2.39
CPNE7-209ENST00000568977 ABCA6Q8N139 1617 aa29.95■■■□□ 2.38
CPNE7-209ENST00000568977 TRAPPC8Q9Y2L5 1435 aa29.95■■■□□ 2.38
CPNE7-209ENST00000568977 SAMD9LQ8IVG5 1584 aa29.94■■■□□ 2.38
CPNE7-209ENST00000568977 GPATCH8Q9UKJ3 1502 aaKnown RBP29.93■■■□□ 2.38
CPNE7-209ENST00000568977 MLH3Q9UHC1 1453 aa29.93■■■□□ 2.38
CPNE7-209ENST00000568977 MTUS2Q5JR59 1369 aa29.91■■■□□ 2.38
CPNE7-209ENST00000568977 MLECQ14165 292 aa29.91■■■□□ 2.38
CPNE7-209ENST00000568977 REREQ9P2R6 1566 aa29.9■■■□□ 2.38
CPNE7-209ENST00000568977 EHBP1L1Q8N3D4 1523 aa29.9■■■□□ 2.38
CPNE7-209ENST00000568977 SYCP2Q9BX26 1530 aa29.89■■■□□ 2.38
CPNE7-209ENST00000568977 MYT1LQ9UL68 1186 aa29.88■■■□□ 2.37
CPNE7-209ENST00000568977 KIDINS220Q9ULH0 1771 aa29.87■■■□□ 2.37
CPNE7-209ENST00000568977 LMTK3Q96Q04 1460 aa29.86■■■□□ 2.37
CPNE7-209ENST00000568977 ZNF777Q9ULD5 760 aaPredicted RBP29.84■■■□□ 2.37
CPNE7-209ENST00000568977 CCNB3Q8WWL7 1395 aa29.84■■■□□ 2.37
CPNE7-209ENST00000568977 TIAM1Q13009 1591 aa29.82■■■□□ 2.36
CPNE7-209ENST00000568977 PLPPR3Q6T4P5 718 aa29.8■■■□□ 2.36
CPNE7-209ENST00000568977 AGLP35573 1532 aa29.79■■■□□ 2.36
CPNE7-209ENST00000568977 PLEKHH2Q8IVE3 1493 aa29.79■■■□□ 2.36
CPNE7-209ENST00000568977 CFDP1Q9UEE9 299 aaPredicted RBP29.78■■■□□ 2.36
CPNE7-209ENST00000568977 KIAA1107Q9UPP5 1409 aa29.77■■■□□ 2.36
CPNE7-209ENST00000568977 LOC105371045A0A1W2PR82 267 aa29.75■■■□□ 2.35
CPNE7-209ENST00000568977 INO80Q9ULG1 1556 aaPredicted RBP29.73■■■□□ 2.35
CPNE7-209ENST00000568977 ATP7AQ04656 1500 aa29.73■■■□□ 2.35
CPNE7-209ENST00000568977 VPS8Q8N3P4 1428 aa29.72■■■□□ 2.35
CPNE7-209ENST00000568977 HNRNPMP52272 730 aaKnown RBP eCLIP29.72■■■□□ 2.35
CPNE7-209ENST00000568977 SUPT6HQ7KZ85 1726 aaKnown RBP29.71■■■□□ 2.35
CPNE7-209ENST00000568977 SPAG9O60271 1321 aaKnown RBP29.7■■■□□ 2.34
CPNE7-209ENST00000568977 NCOA2Q15596 1464 aa29.68■■■□□ 2.34
CPNE7-209ENST00000568977 PREX1Q8TCU6 1659 aa29.67■■■□□ 2.34
CPNE7-209ENST00000568977 PLXNC1O60486 1568 aa29.64■■■□□ 2.33
CPNE7-209ENST00000568977 C3P01024 1663 aa29.63■■■□□ 2.33
CPNE7-209ENST00000568977 CEBPAP49715 358 aaPredicted RBP29.63■■■□□ 2.33
CPNE7-209ENST00000568977 HSPA2P54652 639 aa29.63■■■□□ 2.33
CPNE7-209ENST00000568977 ZNF644Q9H582 1327 aaPredicted RBP29.63■■■□□ 2.33
CPNE7-209ENST00000568977 MBD5Q9P267 1494 aa29.61■■■□□ 2.33
CPNE7-209ENST00000568977 ILDR1Q86SU0 546 aaPredicted RBP29.59■■■□□ 2.33
CPNE7-209ENST00000568977 A2MP01023 1474 aa29.58■■■□□ 2.33
CPNE7-209ENST00000568977 LRRC9Q6ZRR7 1453 aa29.58■■■□□ 2.33
CPNE7-209ENST00000568977 ADGBQ8N7X0 1667 aa29.58■■■□□ 2.33
CPNE7-209ENST00000568977 CAMSAP2Q08AD1 1489 aa29.57■■■□□ 2.32
CPNE7-209ENST00000568977 CNTLNQ9NXG0 1405 aa29.56■■■□□ 2.32
CPNE7-209ENST00000568977 ESF1Q9H501 851 aaKnown RBP29.55■■■□□ 2.32
CPNE7-209ENST00000568977 MROH2AA6NES4 1674 aa29.54■■■□□ 2.32
CPNE7-209ENST00000568977 SETD1BQ9UPS6 1966 aaKnown RBP29.54■■■□□ 2.32
CPNE7-209ENST00000568977 MAP3K1Q13233 1512 aa29.53■■■□□ 2.32
CPNE7-209ENST00000568977 CCDC141Q6ZP82 1450 aa29.52■■■□□ 2.32
CPNE7-209ENST00000568977 UHRF1BP1Q6BDS2 1440 aa29.52■■■□□ 2.32
CPNE7-209ENST00000568977 RTEL1-TNFRSF6BF6WH68 1400 aa29.5■■■□□ 2.31
CPNE7-209ENST00000568977 CLTCQ00610 1675 aaKnown RBP29.47■■■□□ 2.31
CPNE7-209ENST00000568977 ARHGEF5Q12774 1597 aa29.46■■■□□ 2.31
CPNE7-209ENST00000568977 KANK4Q5T7N3 995 aaPredicted RBP29.42■■■□□ 2.3
CPNE7-209ENST00000568977 STRCQ7RTU9 1775 aa29.39■■■□□ 2.3
CPNE7-209ENST00000568977 NPATQ14207 1427 aa29.39■■■□□ 2.3
CPNE7-209ENST00000568977 ZMYM3Q14202 1370 aa29.39■■■□□ 2.29
CPNE7-209ENST00000568977 RSPH4AQ5TD94 716 aa29.38■■■□□ 2.29
CPNE7-209ENST00000568977 GGT6Q6P531 493 aa29.37■■■□□ 2.29
CPNE7-209ENST00000568977 DHX29Q7Z478 1369 aaKnown RBP29.37■■■□□ 2.29
CPNE7-209ENST00000568977 MYOM3Q5VTT5 1437 aa29.37■■■□□ 2.29
CPNE7-209ENST00000568977 MIA2Q96PC5 1412 aa29.33■■■□□ 2.29
CPNE7-209ENST00000568977 MAST1Q9Y2H9 1570 aa29.32■■■□□ 2.28
CPNE7-209ENST00000568977 MYO3AQ8NEV4 1616 aa29.31■■■□□ 2.28
CPNE7-209ENST00000568977 PPP6R1Q9UPN7 881 aa29.3■■■□□ 2.28
CPNE7-209ENST00000568977 PTPRKQ15262 1439 aa29.29■■■□□ 2.28
CPNE7-209ENST00000568977 FBXO41Q8TF61 875 aa29.29■■■□□ 2.28
CPNE7-209ENST00000568977 ZNF142P52746 1687 aaPredicted RBP29.28■■■□□ 2.28
CPNE7-209ENST00000568977 FAM135AQ9P2D6 1515 aa29.27■■■□□ 2.28
CPNE7-209ENST00000568977 TSPY4P0CV99 314 aa29.27■■■□□ 2.28
CPNE7-209ENST00000568977 TSPY10P0CW01 314 aa29.27■■■□□ 2.28
CPNE7-209ENST00000568977 KIF3BO15066 747 aa29.26■■■□□ 2.27
CPNE7-209ENST00000568977 KDM5DQ9BY66 1539 aa29.25■■■□□ 2.27
CPNE7-209ENST00000568977 APLP2Q06481 763 aa29.25■■■□□ 2.27
CPNE7-209ENST00000568977 NCOA1Q15788 1441 aa29.23■■■□□ 2.27
CPNE7-209ENST00000568977 CEP170BQ9Y4F5 1589 aaPredicted RBP29.22■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms