RNA–Protein interactions for RNA: ENST00000568514.5

SNAP23-218, Transcript of synaptosome associated protein 23, humanhuman

TSL 3

Gene SNAP23, Length 1,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP23-218ENST00000568514 HOXB3P14651 431 aaPredicted RBP9.25□□□□□ -0.93
SNAP23-218ENST00000568514 CFAP44Q96MT7 982 aa9.25□□□□□ -0.93
SNAP23-218ENST00000568514 ST18O60284 1047 aa9.22□□□□□ -0.93
SNAP23-218ENST00000568514 NCKAP5LQ9HCH0 1330 aa9.22□□□□□ -0.93
SNAP23-218ENST00000568514 SPRYD3Q8NCJ5 442 aa9.2□□□□□ -0.94
SNAP23-218ENST00000568514 KHSRPQ92945 711 aaKnown RBP eCLIP9.18□□□□□ -0.948e-8■■□□□ 12
SNAP23-218ENST00000568514 DSG2Q14126 1118 aa9.17□□□□□ -0.94
SNAP23-218ENST00000568514 MARVELD3Q96A59 401 aa9.16□□□□□ -0.94
SNAP23-218ENST00000568514 CRISPLD2Q9H0B8 497 aa9.16□□□□□ -0.94
SNAP23-218ENST00000568514 TSHZ2Q9NRE2 1034 aa9.15□□□□□ -0.94
SNAP23-218ENST00000568514 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.15□□□□□ -0.94
SNAP23-218ENST00000568514 POTEB3A0JP26 581 aa9.14□□□□□ -0.95
SNAP23-218ENST00000568514 POTEBQ6S5H4 581 aa9.14□□□□□ -0.95
SNAP23-218ENST00000568514 GPHNQ9NQX3 736 aaPredicted RBP9.14□□□□□ -0.95
SNAP23-218ENST00000568514 TMC2Q8TDI7 906 aa9.13□□□□□ -0.95
SNAP23-218ENST00000568514 POTEGQ6S5H5 508 aa9.12□□□□□ -0.95
SNAP23-218ENST00000568514 PLPP6Q8IY26 295 aa9.12□□□□□ -0.95
SNAP23-218ENST00000568514 LARP6Q9BRS8 491 aaKnown RBP9.12□□□□□ -0.95
SNAP23-218ENST00000568514 RYDENQ9NUL5 291 aaKnown RBP9.12□□□□□ -0.95
SNAP23-218ENST00000568514 POTEMA6NI47 508 aa9.11□□□□□ -0.95
SNAP23-218ENST00000568514 FOXK1P85037 733 aa9.1□□□□□ -0.95
SNAP23-218ENST00000568514 ARSIQ5FYB1 569 aa9.1□□□□□ -0.95
SNAP23-218ENST00000568514 GPR153Q6NV75 609 aa9.1□□□□□ -0.95
SNAP23-218ENST00000568514 SNPHO15079 494 aa9.07□□□□□ -0.96
SNAP23-218ENST00000568514 PDE4AP27815 886 aa9.06□□□□□ -0.96
SNAP23-218ENST00000568514 PPP1R15BQ5SWA1 713 aa9.06□□□□□ -0.96
SNAP23-218ENST00000568514 HOXB1P14653 301 aaPredicted RBP9.05□□□□□ -0.96
SNAP23-218ENST00000568514 MFSD10Q14728 455 aa9.05□□□□□ -0.96
SNAP23-218ENST00000568514 PLCB2Q00722 1185 aa9.04□□□□□ -0.96
SNAP23-218ENST00000568514 DOK7Q18PE1 504 aa9.04□□□□□ -0.96
SNAP23-218ENST00000568514 ZNF710Q8N1W2 664 aa9.04□□□□□ -0.96
SNAP23-218ENST00000568514 UPF1Q92900 1129 aaKnown RBP eCLIP9.04□□□□□ -0.96
SNAP23-218ENST00000568514 EMILIN3Q9NT22 766 aa9.04□□□□□ -0.96
SNAP23-218ENST00000568514 PCDHGA4Q9Y5G9 962 aa9.04□□□□□ -0.96
SNAP23-218ENST00000568514 NUDT7P0C024 238 aa9.03□□□□□ -0.96
SNAP23-218ENST00000568514 FAM205CA6NFA0 338 aa9.02□□□□□ -0.97
SNAP23-218ENST00000568514 KDM4FA0A1W2PPD8 638 aa9.01□□□□□ -0.97
SNAP23-218ENST00000568514 SLC34A2O95436 690 aa9.01□□□□□ -0.97
SNAP23-218ENST00000568514 DDX27Q96GQ7 796 aaKnown RBP9.01□□□□□ -0.97
SNAP23-218ENST00000568514 EMP3P54852 163 aa9□□□□□ -0.97
SNAP23-218ENST00000568514 OXER1Q8TDS5 423 aa8.99□□□□□ -0.97
SNAP23-218ENST00000568514 PTCD2Q8WV60 388 aaKnown RBP8.99□□□□□ -0.97
SNAP23-218ENST00000568514 HS3ST6Q96QI5 342 aa8.98□□□□□ -0.97
SNAP23-218ENST00000568514 LHX6Q9UPM6 363 aa8.97□□□□□ -0.97
SNAP23-218ENST00000568514 VARS2Q5ST30 1063 aaKnown RBP8.95□□□□□ -0.98
SNAP23-218ENST00000568514 CAMK2BQ13554 666 aa8.94□□□□□ -0.98
SNAP23-218ENST00000568514 CDAN1Q8IWY9 1227 aa8.94□□□□□ -0.98
SNAP23-218ENST00000568514 ZSWIM6Q9HCJ5 1215 aa8.94□□□□□ -0.98
SNAP23-218ENST00000568514 KDM2AQ9Y2K7 1162 aa8.94□□□□□ -0.98
SNAP23-218ENST00000568514 RIMBP2O15034 1052 aa8.93□□□□□ -0.98
SNAP23-218ENST00000568514 HAP1P54257 671 aaPredicted RBP8.93□□□□□ -0.98
SNAP23-218ENST00000568514 POTEEQ6S8J3 1075 aa8.93□□□□□ -0.98
SNAP23-218ENST00000568514 ERBB3P21860 1342 aa8.93□□□□□ -0.98
SNAP23-218ENST00000568514 ZNF316A6NFI3 1004 aaPredicted RBP8.92□□□□□ -0.98
SNAP23-218ENST00000568514 DPYSL4O14531 572 aa8.91□□□□□ -0.98
SNAP23-218ENST00000568514 KRTAP3-3Q9BYR6 98 aa8.91□□□□□ -0.98
SNAP23-218ENST00000568514 KRTAP3-2Q9BYR7 98 aa8.91□□□□□ -0.98
SNAP23-218ENST00000568514 EVI5O60447 810 aa8.87□□□□□ -0.99
SNAP23-218ENST00000568514 AXIN2Q9Y2T1 843 aa8.87□□□□□ -0.99
SNAP23-218ENST00000568514 MAP3K9P80192 1104 aa8.86□□□□□ -0.99
SNAP23-218ENST00000568514 E2F4Q16254 413 aa8.86□□□□□ -0.99
SNAP23-218ENST00000568514 KCNV2Q8TDN2 545 aa8.85□□□□□ -0.99
SNAP23-218ENST00000568514 ANO8Q9HCE9 1232 aaPredicted RBP8.85□□□□□ -0.99
SNAP23-218ENST00000568514 ZNF687Q8N1G0 1237 aa8.83□□□□□ -1
SNAP23-218ENST00000568514 WDR70Q9NW82 654 aa8.83□□□□□ -1
SNAP23-218ENST00000568514 TBC1D12O60347 775 aa8.82□□□□□ -1
SNAP23-218ENST00000568514 PRIM1P49642 420 aaKnown RBP8.82□□□□□ -1
SNAP23-218ENST00000568514 PSEN2P49810 448 aa8.8□□□□□ -1
SNAP23-218ENST00000568514 FOSBP53539 338 aa8.8□□□□□ -1
SNAP23-218ENST00000568514 ZNF454Q8N9F8 522 aa8.8□□□□□ -1
SNAP23-218ENST00000568514 DDX12PQ92771 950 aa8.79□□□□□ -1
SNAP23-218ENST00000568514 PCDHGA10Q9Y5H3 936 aa8.79□□□□□ -1
SNAP23-218ENST00000568514 DMRTA1Q5VZB9 504 aa8.78□□□□□ -1
SNAP23-218ENST00000568514 ADAM33Q9BZ11 813 aa8.78□□□□□ -1
SNAP23-218ENST00000568514 PDIA6Q15084 440 aa8.76□□□□□ -1.01
SNAP23-218ENST00000568514 MLLT3P42568 568 aaPredicted RBP8.75□□□□□ -1.01
SNAP23-218ENST00000568514 ARIH1Q9Y4X5 557 aaPredicted RBP8.75□□□□□ -1.01
SNAP23-218ENST00000568514 SPNS2Q8IVW8 549 aa8.74□□□□□ -1.01
SNAP23-218ENST00000568514 PLSCR2Q9NRY7 297 aa8.74□□□□□ -1.01
SNAP23-218ENST00000568514 JPH4Q96JJ6 628 aa8.73□□□□□ -1.01
SNAP23-218ENST00000568514 PCDH10Q9P2E7 1040 aa8.73□□□□□ -1.01
SNAP23-218ENST00000568514 ANKRD13DQ6ZTN6 518 aa8.72□□□□□ -1.01
SNAP23-218ENST00000568514 RBM33Q96EV2 1170 aaKnown RBP8.72□□□□□ -1.01
SNAP23-218ENST00000568514 GRXCR2A6NFK2 248 aa8.71□□□□□ -1.02
SNAP23-218ENST00000568514 COL9A1P20849 921 aa8.71□□□□□ -1.02
SNAP23-218ENST00000568514 PTGER2P43116 358 aa8.71□□□□□ -1.02
SNAP23-218ENST00000568514 PPP4R3BQ5MIZ7 849 aa8.71□□□□□ -1.02
SNAP23-218ENST00000568514 KCNK17Q96T54 332 aa8.71□□□□□ -1.02
SNAP23-218ENST00000568514 ARHGAP33O14559 1287 aa8.7□□□□□ -1.02
SNAP23-218ENST00000568514 SEMA3EO15041 775 aa8.7□□□□□ -1.02
SNAP23-218ENST00000568514 LSM11P83369 360 aaKnown RBP eCLIP8.7□□□□□ -1.02
SNAP23-218ENST00000568514 ZDHHC16Q969W1 377 aa8.7□□□□□ -1.02
SNAP23-218ENST00000568514 PHF14O94880 888 aa8.69□□□□□ -1.02
SNAP23-218ENST00000568514 TSR1Q2NL82 804 aaKnown RBP8.69□□□□□ -1.02
SNAP23-218ENST00000568514 VSIG10Q8N0Z9 540 aa8.69□□□□□ -1.02
SNAP23-218ENST00000568514 OSBPP22059 807 aa8.68□□□□□ -1.02
SNAP23-218ENST00000568514 ARHGEF1Q92888 912 aaKnown RBP8.68□□□□□ -1.02
SNAP23-218ENST00000568514 BCL2L12Q9HB09 334 aa8.68□□□□□ -1.02
SNAP23-218ENST00000568514 SPDYE16A6NNV3 312 aaPredicted RBP8.67□□□□□ -1.02
SNAP23-218ENST00000568514 NBR1Q14596 966 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms