RNA–Protein interactions for RNA: ENST00000568310.1

DNAAF4-CCPG1-202, Transcript of DNAAF4-CCPG1 readthrough (NMD candidate), humanhuman

TSL 2

Gene DNAAF4-CCPG1, Length 1,293 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF4-CCPG1-202ENST00000568310 KIF3CO14782 793 aa18.82■□□□□ 0.6
DNAAF4-CCPG1-202ENST00000568310 HOXB3P14651 431 aaPredicted RBP18.82■□□□□ 0.6
DNAAF4-CCPG1-202ENST00000568310 POTEMA6NI47 508 aa18.81■□□□□ 0.6
DNAAF4-CCPG1-202ENST00000568310 TMC2Q8TDI7 906 aa18.81■□□□□ 0.6
DNAAF4-CCPG1-202ENST00000568310 POTEGQ6S5H5 508 aa18.8■□□□□ 0.6
DNAAF4-CCPG1-202ENST00000568310 DOK7Q18PE1 504 aa18.79■□□□□ 0.6
DNAAF4-CCPG1-202ENST00000568310 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.75■□□□□ 0.59
DNAAF4-CCPG1-202ENST00000568310 ZNF710Q8N1W2 664 aa18.74■□□□□ 0.59
DNAAF4-CCPG1-202ENST00000568310 RIMBP2O15034 1052 aa18.7■□□□□ 0.58
DNAAF4-CCPG1-202ENST00000568310 GPHNQ9NQX3 736 aaPredicted RBP18.69■□□□□ 0.58
DNAAF4-CCPG1-202ENST00000568310 SPRYD3Q8NCJ5 442 aa18.67■□□□□ 0.58
DNAAF4-CCPG1-202ENST00000568310 MARVELD3Q96A59 401 aa18.66■□□□□ 0.58
DNAAF4-CCPG1-202ENST00000568310 ZSWIM6Q9HCJ5 1215 aa18.64■□□□□ 0.57
DNAAF4-CCPG1-202ENST00000568310 FOXK1P85037 733 aa18.62■□□□□ 0.57
DNAAF4-CCPG1-202ENST00000568310 HOXB1P14653 301 aaPredicted RBP18.61■□□□□ 0.57
DNAAF4-CCPG1-202ENST00000568310 CRISPLD2Q9H0B8 497 aa18.61■□□□□ 0.57
DNAAF4-CCPG1-202ENST00000568310 EMP3P54852 163 aa18.59■□□□□ 0.57
DNAAF4-CCPG1-202ENST00000568310 PAXIP1Q6ZW49 1069 aaPredicted RBP18.59■□□□□ 0.57
DNAAF4-CCPG1-202ENST00000568310 PDE4AP27815 886 aa18.58■□□□□ 0.56
DNAAF4-CCPG1-202ENST00000568310 DSG2Q14126 1118 aa18.58■□□□□ 0.56
DNAAF4-CCPG1-202ENST00000568310 CFAP44Q96MT7 982 aa18.58■□□□□ 0.56
DNAAF4-CCPG1-202ENST00000568310 PLPP6Q8IY26 295 aa18.57■□□□□ 0.56
DNAAF4-CCPG1-202ENST00000568310 NCKAP5LQ9HCH0 1330 aa18.56■□□□□ 0.56
DNAAF4-CCPG1-202ENST00000568310 GPR153Q6NV75 609 aa18.56■□□□□ 0.56
DNAAF4-CCPG1-202ENST00000568310 SLC34A2O95436 690 aa18.54■□□□□ 0.56
DNAAF4-CCPG1-202ENST00000568310 ARSIQ5FYB1 569 aa18.52■□□□□ 0.56
DNAAF4-CCPG1-202ENST00000568310 CADPS2Q86UW7 1296 aa18.51■□□□□ 0.55
DNAAF4-CCPG1-202ENST00000568310 PCDH10Q9P2E7 1040 aa18.5■□□□□ 0.55
DNAAF4-CCPG1-202ENST00000568310 LARP6Q9BRS8 491 aaKnown RBP18.49■□□□□ 0.55
DNAAF4-CCPG1-202ENST00000568310 FAM205CA6NFA0 338 aa18.47■□□□□ 0.55
DNAAF4-CCPG1-202ENST00000568310 PPP1R15BQ5SWA1 713 aa18.47■□□□□ 0.55
DNAAF4-CCPG1-202ENST00000568310 KHSRPQ92945 711 aaKnown RBP eCLIP18.46■□□□□ 0.552e-15■■■□□ 18
DNAAF4-CCPG1-202ENST00000568310 PCDHGA4Q9Y5G9 962 aa18.45■□□□□ 0.54
DNAAF4-CCPG1-202ENST00000568310 CDAN1Q8IWY9 1227 aa18.44■□□□□ 0.54
DNAAF4-CCPG1-202ENST00000568310 DDX27Q96GQ7 796 aaKnown RBP18.44■□□□□ 0.54
DNAAF4-CCPG1-202ENST00000568310 HS3ST6Q96QI5 342 aa18.43■□□□□ 0.54
DNAAF4-CCPG1-202ENST00000568310 PTCD2Q8WV60 388 aaKnown RBP18.42■□□□□ 0.54
DNAAF4-CCPG1-202ENST00000568310 ERBB3P21860 1342 aa18.42■□□□□ 0.54
DNAAF4-CCPG1-202ENST00000568310 MFSD10Q14728 455 aa18.41■□□□□ 0.54
DNAAF4-CCPG1-202ENST00000568310 POTEB3A0JP26 581 aa18.39■□□□□ 0.53
DNAAF4-CCPG1-202ENST00000568310 POTEBQ6S5H4 581 aa18.39■□□□□ 0.53
DNAAF4-CCPG1-202ENST00000568310 NUDT7P0C024 238 aa18.37■□□□□ 0.53
DNAAF4-CCPG1-202ENST00000568310 TBC1D12O60347 775 aa18.34■□□□□ 0.53
DNAAF4-CCPG1-202ENST00000568310 VARS2Q5ST30 1063 aaKnown RBP18.33■□□□□ 0.52
DNAAF4-CCPG1-202ENST00000568310 ZNF316A6NFI3 1004 aaPredicted RBP18.31■□□□□ 0.52
DNAAF4-CCPG1-202ENST00000568310 OXER1Q8TDS5 423 aa18.31■□□□□ 0.52
DNAAF4-CCPG1-202ENST00000568310 UPF1Q92900 1129 aaKnown RBP eCLIP18.31■□□□□ 0.52
DNAAF4-CCPG1-202ENST00000568310 KDM4FA0A1W2PPD8 638 aa18.25■□□□□ 0.51
DNAAF4-CCPG1-202ENST00000568310 LHX6Q9UPM6 363 aa18.25■□□□□ 0.51
DNAAF4-CCPG1-202ENST00000568310 ZNF687Q8N1G0 1237 aa18.2■□□□□ 0.5
DNAAF4-CCPG1-202ENST00000568310 TSHZ2Q9NRE2 1034 aa18.19■□□□□ 0.5
DNAAF4-CCPG1-202ENST00000568310 EMILIN3Q9NT22 766 aa18.19■□□□□ 0.5
DNAAF4-CCPG1-202ENST00000568310 CAMK2BQ13554 666 aa18.17■□□□□ 0.5
DNAAF4-CCPG1-202ENST00000568310 MAP3K9P80192 1104 aa18.16■□□□□ 0.5
DNAAF4-CCPG1-202ENST00000568310 PLCB2Q00722 1185 aa18.15■□□□□ 0.5
DNAAF4-CCPG1-202ENST00000568310 KRTAP3-3Q9BYR6 98 aa18.15■□□□□ 0.5
DNAAF4-CCPG1-202ENST00000568310 KRTAP3-2Q9BYR7 98 aa18.15■□□□□ 0.5
DNAAF4-CCPG1-202ENST00000568310 PSDA5PKW4 1024 aaPredicted RBP18.14■□□□□ 0.49
DNAAF4-CCPG1-202ENST00000568310 WDR70Q9NW82 654 aa18.14■□□□□ 0.49
DNAAF4-CCPG1-202ENST00000568310 EVI5O60447 810 aa18.1■□□□□ 0.49
DNAAF4-CCPG1-202ENST00000568310 PLSCR2Q9NRY7 297 aa18.1■□□□□ 0.49
DNAAF4-CCPG1-202ENST00000568310 ANO8Q9HCE9 1232 aaPredicted RBP18.07■□□□□ 0.48
DNAAF4-CCPG1-202ENST00000568310 E2F4Q16254 413 aa18.05■□□□□ 0.48
DNAAF4-CCPG1-202ENST00000568310 DPYSL4O14531 572 aa18.03■□□□□ 0.48
DNAAF4-CCPG1-202ENST00000568310 PPP4R3BQ5MIZ7 849 aa18.03■□□□□ 0.48
DNAAF4-CCPG1-202ENST00000568310 PBX2P40425 430 aa18■□□□□ 0.47
DNAAF4-CCPG1-202ENST00000568310 ZNF454Q8N9F8 522 aa17.98■□□□□ 0.47
DNAAF4-CCPG1-202ENST00000568310 SPNS2Q8IVW8 549 aa17.97■□□□□ 0.47
DNAAF4-CCPG1-202ENST00000568310 POTEEQ6S8J3 1075 aa17.96■□□□□ 0.47
DNAAF4-CCPG1-202ENST00000568310 FOSBP53539 338 aa17.95■□□□□ 0.46
DNAAF4-CCPG1-202ENST00000568310 AXIN2Q9Y2T1 843 aa17.95■□□□□ 0.46
DNAAF4-CCPG1-202ENST00000568310 JPH4Q96JJ6 628 aa17.94■□□□□ 0.46
DNAAF4-CCPG1-202ENST00000568310 ARHGAP33O14559 1287 aa17.92■□□□□ 0.46
DNAAF4-CCPG1-202ENST00000568310 LSM11P83369 360 aaKnown RBP eCLIP17.9■□□□□ 0.46
DNAAF4-CCPG1-202ENST00000568310 ARIH1Q9Y4X5 557 aaPredicted RBP17.9■□□□□ 0.46
DNAAF4-CCPG1-202ENST00000568310 ANKRD13DQ6ZTN6 518 aa17.89■□□□□ 0.45
DNAAF4-CCPG1-202ENST00000568310 HAP1P54257 671 aaPredicted RBP17.87■□□□□ 0.45
DNAAF4-CCPG1-202ENST00000568310 PDIA6Q15084 440 aa17.86■□□□□ 0.45
DNAAF4-CCPG1-202ENST00000568310 ZDHHC16Q969W1 377 aa17.86■□□□□ 0.45
DNAAF4-CCPG1-202ENST00000568310 SPDYE16A6NNV3 312 aaPredicted RBP17.85■□□□□ 0.45
DNAAF4-CCPG1-202ENST00000568310 BCL2L12Q9HB09 334 aa17.85■□□□□ 0.45
DNAAF4-CCPG1-202ENST00000568310 PSEN2P49810 448 aa17.84■□□□□ 0.45
DNAAF4-CCPG1-202ENST00000568310 PCDHGA10Q9Y5H3 936 aa17.84■□□□□ 0.45
DNAAF4-CCPG1-202ENST00000568310 PHF14O94880 888 aa17.83■□□□□ 0.44
DNAAF4-CCPG1-202ENST00000568310 MMRN1Q13201 1228 aa17.83■□□□□ 0.44
DNAAF4-CCPG1-202ENST00000568310 KCNH8Q96L42 1107 aa17.83■□□□□ 0.44
DNAAF4-CCPG1-202ENST00000568310 PTGER2P43116 358 aa17.82■□□□□ 0.44
DNAAF4-CCPG1-202ENST00000568310 KCNK17Q96T54 332 aa17.82■□□□□ 0.44
DNAAF4-CCPG1-202ENST00000568310 ADAM33Q9BZ11 813 aa17.8■□□□□ 0.44
DNAAF4-CCPG1-202ENST00000568310 DMRTA1Q5VZB9 504 aa17.79■□□□□ 0.44
DNAAF4-CCPG1-202ENST00000568310 PTPREP23469 700 aa17.78■□□□□ 0.44
DNAAF4-CCPG1-202ENST00000568310 TYW1BQ6NUM6 668 aa17.78■□□□□ 0.44
DNAAF4-CCPG1-202ENST00000568310 DDX12PQ92771 950 aa17.78■□□□□ 0.44
DNAAF4-CCPG1-202ENST00000568310 FBXW7Q969H0 707 aa17.78■□□□□ 0.44
DNAAF4-CCPG1-202ENST00000568310 KCNV2Q8TDN2 545 aa17.76■□□□□ 0.43
DNAAF4-CCPG1-202ENST00000568310 EPAS1Q99814 870 aa17.76■□□□□ 0.43
DNAAF4-CCPG1-202ENST00000568310 ARHGEF1Q92888 912 aaKnown RBP17.74■□□□□ 0.43
DNAAF4-CCPG1-202ENST00000568310 ADGRD1Q6QNK2 874 aa17.73■□□□□ 0.43
DNAAF4-CCPG1-202ENST00000568310 TK2O00142 265 aa17.72■□□□□ 0.43
DNAAF4-CCPG1-202ENST00000568310 P3H3Q8IVL6 736 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms