RNA–Protein interactions for RNA: ENST00000568230.5

KNOP1-205, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KNOP1, Length 1,311 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-205ENST00000568230 CDC42BPBQ9Y5S2 1711 aa27.41■■□□□ 1.98
KNOP1-205ENST00000568230 EFCAB2Q5VUJ9 269 aa27.41■■□□□ 1.98
KNOP1-205ENST00000568230 POGZQ7Z3K3 1410 aa27.4■■□□□ 1.98
KNOP1-205ENST00000568230 ARHGEF40Q8TER5 1519 aa27.39■■□□□ 1.97
KNOP1-205ENST00000568230 CDC42BPAQ5VT25 1732 aa27.38■■□□□ 1.97
KNOP1-205ENST00000568230 SCAPERQ9BY12 1400 aa27.38■■□□□ 1.97
KNOP1-205ENST00000568230 VPS8Q8N3P4 1428 aa27.37■■□□□ 1.97
KNOP1-205ENST00000568230 EHBP1L1Q8N3D4 1523 aa27.35■■□□□ 1.97
KNOP1-205ENST00000568230 MTUS2Q5JR59 1369 aa27.34■■□□□ 1.97
KNOP1-205ENST00000568230 MAGI2Q86UL8 1455 aa27.32■■□□□ 1.96
KNOP1-205ENST00000568230 ABCC1P33527 1531 aa27.3■■□□□ 1.96
KNOP1-205ENST00000568230 ZFYVE16Q7Z3T8 1539 aa27.3■■□□□ 1.96
KNOP1-205ENST00000568230 GPATCH8Q9UKJ3 1502 aaKnown RBP27.3■■□□□ 1.96
KNOP1-205ENST00000568230 ZNF518AQ6AHZ1 1483 aa27.28■■□□□ 1.96
KNOP1-205ENST00000568230 KDM5CP41229 1560 aa27.28■■□□□ 1.96
KNOP1-205ENST00000568230 TIAM1Q13009 1591 aa27.28■■□□□ 1.96
KNOP1-205ENST00000568230 YEATS2Q9ULM3 1422 aa27.26■■□□□ 1.95
KNOP1-205ENST00000568230 ITSN2Q9NZM3 1697 aa27.25■■□□□ 1.95
KNOP1-205ENST00000568230 SAMD9LQ8IVG5 1584 aa27.23■■□□□ 1.95
KNOP1-205ENST00000568230 ARHGEF12Q9NZN5 1544 aa27.22■■□□□ 1.95
KNOP1-205ENST00000568230 CCNB3Q8WWL7 1395 aa27.21■■□□□ 1.95
KNOP1-205ENST00000568230 HECW2Q9P2P5 1572 aa27.19■■□□□ 1.94
KNOP1-205ENST00000568230 MAP3K1Q13233 1512 aa27.19■■□□□ 1.94
KNOP1-205ENST00000568230 ADAMTSL3P82987 1691 aa27.19■■□□□ 1.94
KNOP1-205ENST00000568230 BCORL1Q5H9F3 1711 aa27.18■■□□□ 1.94
KNOP1-205ENST00000568230 TRAPPC8Q9Y2L5 1435 aa27.18■■□□□ 1.94
KNOP1-205ENST00000568230 SUPT6HQ7KZ85 1726 aaKnown RBP27.18■■□□□ 1.94
KNOP1-205ENST00000568230 AFAP1Q8N556 730 aa27.17■■□□□ 1.94
KNOP1-205ENST00000568230 SIGLEC1Q9BZZ2 1709 aa27.17■■□□□ 1.94
KNOP1-205ENST00000568230 SYCP2Q9BX26 1530 aa27.15■■□□□ 1.94
KNOP1-205ENST00000568230 NCOA2Q15596 1464 aa27.15■■□□□ 1.94
KNOP1-205ENST00000568230 LRRC9Q6ZRR7 1453 aa27.15■■□□□ 1.94
KNOP1-205ENST00000568230 MLH3Q9UHC1 1453 aa27.15■■□□□ 1.94
KNOP1-205ENST00000568230 PLEKHH2Q8IVE3 1493 aa27.14■■□□□ 1.94
KNOP1-205ENST00000568230 CFDP1Q9UEE9 299 aaPredicted RBP27.14■■□□□ 1.93
KNOP1-205ENST00000568230 ATP10AO60312 1499 aa27.13■■□□□ 1.93
KNOP1-205ENST00000568230 KIAA1107Q9UPP5 1409 aa27.13■■□□□ 1.93
KNOP1-205ENST00000568230 ARID4BQ4LE39 1312 aaPredicted RBP27.12■■□□□ 1.93
KNOP1-205ENST00000568230 C9orf84Q5VXU9 1444 aa27.12■■□□□ 1.93
KNOP1-205ENST00000568230 DIP2CQ9Y2E4 1556 aa27.11■■□□□ 1.93
KNOP1-205ENST00000568230 ZNF777Q9ULD5 760 aaPredicted RBP27.11■■□□□ 1.93
KNOP1-205ENST00000568230 ABCA6Q8N139 1617 aa27.1■■□□□ 1.93
KNOP1-205ENST00000568230 MADDQ8WXG6 1647 aa27.09■■□□□ 1.93
KNOP1-205ENST00000568230 REREQ9P2R6 1566 aa27.08■■□□□ 1.93
KNOP1-205ENST00000568230 KIDINS220Q9ULH0 1771 aa27.07■■□□□ 1.92
KNOP1-205ENST00000568230 PTPRMP28827 1452 aa27.03■■□□□ 1.92
KNOP1-205ENST00000568230 HNRNPMP52272 730 aaKnown RBP eCLIP27.02■■□□□ 1.92
KNOP1-205ENST00000568230 KANK4Q5T7N3 995 aaPredicted RBP27.01■■□□□ 1.91
KNOP1-205ENST00000568230 INO80Q9ULG1 1556 aaPredicted RBP27.01■■□□□ 1.91
KNOP1-205ENST00000568230 ZNF644Q9H582 1327 aaPredicted RBP27■■□□□ 1.91
KNOP1-205ENST00000568230 MBD5Q9P267 1494 aa27■■□□□ 1.91
KNOP1-205ENST00000568230 MYT1LQ9UL68 1186 aa26.99■■□□□ 1.91
KNOP1-205ENST00000568230 RIMS1Q86UR5 1692 aaKnown RBP26.98■■□□□ 1.91
KNOP1-205ENST00000568230 ATP7AQ04656 1500 aa26.98■■□□□ 1.91
KNOP1-205ENST00000568230 CAMSAP2Q08AD1 1489 aa26.97■■□□□ 1.91
KNOP1-205ENST00000568230 SPAG9O60271 1321 aaKnown RBP26.97■■□□□ 1.91
KNOP1-205ENST00000568230 AGLP35573 1532 aa26.96■■□□□ 1.91
KNOP1-205ENST00000568230 FER1L4A9Z1Z3 1794 aa26.96■■□□□ 1.91
KNOP1-205ENST00000568230 APLP2Q06481 763 aa26.92■■□□□ 1.9
KNOP1-205ENST00000568230 MLECQ14165 292 aa26.91■■□□□ 1.9
KNOP1-205ENST00000568230 CCDC141Q6ZP82 1450 aa26.91■■□□□ 1.9
KNOP1-205ENST00000568230 MYOM3Q5VTT5 1437 aa26.91■■□□□ 1.9
KNOP1-205ENST00000568230 PLXNC1O60486 1568 aa26.89■■□□□ 1.9
KNOP1-205ENST00000568230 ARHGEF5Q12774 1597 aa26.89■■□□□ 1.9
KNOP1-205ENST00000568230 MIA2Q96PC5 1412 aa26.88■■□□□ 1.89
KNOP1-205ENST00000568230 RTEL1-TNFRSF6BF6WH68 1400 aa26.86■■□□□ 1.89
KNOP1-205ENST00000568230 ADGBQ8N7X0 1667 aa26.85■■□□□ 1.89
KNOP1-205ENST00000568230 A2MP01023 1474 aa26.83■■□□□ 1.89
KNOP1-205ENST00000568230 RSPH4AQ5TD94 716 aa26.83■■□□□ 1.89
KNOP1-205ENST00000568230 MAST1Q9Y2H9 1570 aa26.76■■□□□ 1.87
KNOP1-205ENST00000568230 PTPN23Q9H3S7 1636 aa26.74■■□□□ 1.87
KNOP1-205ENST00000568230 LMTK3Q96Q04 1460 aa26.73■■□□□ 1.87
KNOP1-205ENST00000568230 FGD6Q6ZV73 1430 aa26.73■■□□□ 1.87
KNOP1-205ENST00000568230 CNTLNQ9NXG0 1405 aa26.72■■□□□ 1.87
KNOP1-205ENST00000568230 TCOF1Q13428 1488 aaKnown RBP26.71■■□□□ 1.87
KNOP1-205ENST00000568230 DHX29Q7Z478 1369 aaKnown RBP26.71■■□□□ 1.87
KNOP1-205ENST00000568230 C3P01024 1663 aa26.7■■□□□ 1.86
KNOP1-205ENST00000568230 TSPY4P0CV99 314 aa26.69■■□□□ 1.86
KNOP1-205ENST00000568230 TSPY10P0CW01 314 aa26.69■■□□□ 1.86
KNOP1-205ENST00000568230 MROH2AA6NES4 1674 aa26.68■■□□□ 1.86
KNOP1-205ENST00000568230 PLPPR3Q6T4P5 718 aa26.67■■□□□ 1.86
KNOP1-205ENST00000568230 CROCC2H7BZ55 1655 aa26.67■■□□□ 1.86
KNOP1-205ENST00000568230 SHANK2Q9UPX8 1470 aa26.66■■□□□ 1.86
KNOP1-205ENST00000568230 ESF1Q9H501 851 aaKnown RBP26.65■■□□□ 1.86
KNOP1-205ENST00000568230 CEBPAP49715 358 aaPredicted RBP26.65■■□□□ 1.86
KNOP1-205ENST00000568230 PREX1Q8TCU6 1659 aa26.64■■□□□ 1.86
KNOP1-205ENST00000568230 DNMT1P26358 1616 aaKnown RBP26.64■■□□□ 1.85
KNOP1-205ENST00000568230 ABCC5O15440 1437 aa26.63■■□□□ 1.85
KNOP1-205ENST00000568230 CLTCQ00610 1675 aaKnown RBP26.62■■□□□ 1.85
KNOP1-205ENST00000568230 SETD1BQ9UPS6 1966 aaKnown RBP26.6■■□□□ 1.85
KNOP1-205ENST00000568230 PPP6R1Q9UPN7 881 aa26.6■■□□□ 1.85
KNOP1-205ENST00000568230 DAPK1P53355 1430 aa26.6■■□□□ 1.85
KNOP1-205ENST00000568230 FAM135AQ9P2D6 1515 aa26.59■■□□□ 1.85
KNOP1-205ENST00000568230 GGT6Q6P531 493 aa26.59■■□□□ 1.85
KNOP1-205ENST00000568230 EIF2AK4Q9P2K8 1649 aaKnown RBP26.57■■□□□ 1.84
KNOP1-205ENST00000568230 ZMYM3Q14202 1370 aa26.56■■□□□ 1.84
KNOP1-205ENST00000568230 RNF17Q9BXT8 1623 aaKnown RBP26.55■■□□□ 1.84
KNOP1-205ENST00000568230 KIF3BO15066 747 aa26.55■■□□□ 1.84
KNOP1-205ENST00000568230 NPATQ14207 1427 aa26.54■■□□□ 1.84
KNOP1-205ENST00000568230 DUOX2Q9NRD8 1548 aa26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms