RNA–Protein interactions for RNA: ENST00000568205.1

SPG7-218, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-218ENST00000568205 FANCAO15360 1455 aa24.28■■□□□ 1.48
SPG7-218ENST00000568205 CFDP1Q9UEE9 299 aaPredicted RBP24.28■■□□□ 1.48
SPG7-218ENST00000568205 CDC42BPAQ5VT25 1732 aa24.27■■□□□ 1.48
SPG7-218ENST00000568205 TSPOAP1O95153 1857 aa24.26■■□□□ 1.47
SPG7-218ENST00000568205 NEO1Q92859 1461 aa24.26■■□□□ 1.47
SPG7-218ENST00000568205 ITSN2Q9NZM3 1697 aa24.24■■□□□ 1.47
SPG7-218ENST00000568205 CDC42BPBQ9Y5S2 1711 aa24.22■■□□□ 1.47
SPG7-218ENST00000568205 MIA2Q96PC5 1412 aa24.22■■□□□ 1.47
SPG7-218ENST00000568205 AKNAQ7Z591 1439 aa24.21■■□□□ 1.47
SPG7-218ENST00000568205 ZNF777Q9ULD5 760 aaPredicted RBP24.21■■□□□ 1.47
SPG7-218ENST00000568205 CFAP74Q9C0B2 1584 aa24.2■■□□□ 1.47
SPG7-218ENST00000568205 FGD6Q6ZV73 1430 aa24.2■■□□□ 1.46
SPG7-218ENST00000568205 ADGRL1O94910 1474 aa24.17■■□□□ 1.46
SPG7-218ENST00000568205 ZNF644Q9H582 1327 aaPredicted RBP24.16■■□□□ 1.46
SPG7-218ENST00000568205 SAMD9LQ8IVG5 1584 aa24.16■■□□□ 1.46
SPG7-218ENST00000568205 CAMSAP2Q08AD1 1489 aa24.14■■□□□ 1.46
SPG7-218ENST00000568205 PLEKHH2Q8IVE3 1493 aa24.14■■□□□ 1.46
SPG7-218ENST00000568205 SCAPERQ9BY12 1400 aa24.13■■□□□ 1.45
SPG7-218ENST00000568205 ABCC1P33527 1531 aa24.13■■□□□ 1.45
SPG7-218ENST00000568205 KIAA1107Q9UPP5 1409 aa24.12■■□□□ 1.45
SPG7-218ENST00000568205 TCOF1Q13428 1488 aaKnown RBP24.11■■□□□ 1.45
SPG7-218ENST00000568205 COL17A1Q9UMD9 1497 aaPredicted RBP24.1■■□□□ 1.45
SPG7-218ENST00000568205 PTPN23Q9H3S7 1636 aa24.1■■□□□ 1.45
SPG7-218ENST00000568205 ARHGEF12Q9NZN5 1544 aa24.1■■□□□ 1.45
SPG7-218ENST00000568205 DENND4BO75064 1496 aaPredicted RBP24.09■■□□□ 1.45
SPG7-218ENST00000568205 SYCP2Q9BX26 1530 aa24.09■■□□□ 1.45
SPG7-218ENST00000568205 RRBP1Q9P2E9 1410 aaKnown RBP24.08■■□□□ 1.44
SPG7-218ENST00000568205 HNRNPMP52272 730 aaKnown RBP eCLIP24.07■■□□□ 1.44
SPG7-218ENST00000568205 POGZQ7Z3K3 1410 aa24.07■■□□□ 1.44
SPG7-218ENST00000568205 FAM50AQ14320 339 aaKnown RBP24.06■■□□□ 1.44
SPG7-218ENST00000568205 MBD5Q9P267 1494 aa24.06■■□□□ 1.44
SPG7-218ENST00000568205 TRAPPC8Q9Y2L5 1435 aa24.05■■□□□ 1.44
SPG7-218ENST00000568205 RAPGEF3O95398 923 aa24.05■■□□□ 1.44
SPG7-218ENST00000568205 KDM6BO15054 1643 aa24.05■■□□□ 1.44
SPG7-218ENST00000568205 ZNF518AQ6AHZ1 1483 aa24.02■■□□□ 1.44
SPG7-218ENST00000568205 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.02■■□□□ 1.44
SPG7-218ENST00000568205 AFAP1Q8N556 730 aa24.01■■□□□ 1.43
SPG7-218ENST00000568205 CCDC141Q6ZP82 1450 aa24■■□□□ 1.43
SPG7-218ENST00000568205 ARHGEF5Q12774 1597 aa24■■□□□ 1.43
SPG7-218ENST00000568205 RSPH4AQ5TD94 716 aa24■■□□□ 1.43
SPG7-218ENST00000568205 FRMPD1Q5SYB0 1578 aa23.99■■□□□ 1.43
SPG7-218ENST00000568205 RICTORQ6R327 1708 aa23.96■■□□□ 1.43
SPG7-218ENST00000568205 KDM5CP41229 1560 aa23.96■■□□□ 1.43
SPG7-218ENST00000568205 ABCC5O15440 1437 aa23.96■■□□□ 1.43
SPG7-218ENST00000568205 DAPK1P53355 1430 aa23.95■■□□□ 1.42
SPG7-218ENST00000568205 ZMYM4Q5VZL5 1548 aa23.94■■□□□ 1.42
SPG7-218ENST00000568205 SPAG9O60271 1321 aaKnown RBP23.94■■□□□ 1.42
SPG7-218ENST00000568205 DNMT1P26358 1616 aaKnown RBP23.93■■□□□ 1.42
SPG7-218ENST00000568205 TSPY4P0CV99 314 aa23.92■■□□□ 1.42
SPG7-218ENST00000568205 TSPY10P0CW01 314 aa23.92■■□□□ 1.42
SPG7-218ENST00000568205 MLH3Q9UHC1 1453 aa23.91■■□□□ 1.42
SPG7-218ENST00000568205 MAGI2Q86UL8 1455 aa23.9■■□□□ 1.42
SPG7-218ENST00000568205 SHANK2Q9UPX8 1470 aa23.9■■□□□ 1.42
SPG7-218ENST00000568205 C9orf84Q5VXU9 1444 aa23.9■■□□□ 1.42
SPG7-218ENST00000568205 HECW2Q9P2P5 1572 aa23.88■■□□□ 1.41
SPG7-218ENST00000568205 ITGAEP38570 1179 aa23.88■■□□□ 1.41
SPG7-218ENST00000568205 MYT1LQ9UL68 1186 aa23.88■■□□□ 1.41
SPG7-218ENST00000568205 RTEL1-TNFRSF6BF6WH68 1400 aa23.87■■□□□ 1.41
SPG7-218ENST00000568205 ZFYVE16Q7Z3T8 1539 aa23.87■■□□□ 1.41
SPG7-218ENST00000568205 PTPRKQ15262 1439 aa23.86■■□□□ 1.41
SPG7-218ENST00000568205 ATP7AQ04656 1500 aa23.86■■□□□ 1.41
SPG7-218ENST00000568205 INO80Q9ULG1 1556 aaPredicted RBP23.86■■□□□ 1.41
SPG7-218ENST00000568205 MAST1Q9Y2H9 1570 aa23.86■■□□□ 1.41
SPG7-218ENST00000568205 YEATS2Q9ULM3 1422 aa23.85■■□□□ 1.41
SPG7-218ENST00000568205 CROCC2H7BZ55 1655 aa23.84■■□□□ 1.41
SPG7-218ENST00000568205 CHIC2Q9UKJ5 165 aa23.84■■□□□ 1.41
SPG7-218ENST00000568205 KIDINS220Q9ULH0 1771 aa23.81■■□□□ 1.4
SPG7-218ENST00000568205 ARHGEF40Q8TER5 1519 aa23.81■■□□□ 1.4
SPG7-218ENST00000568205 ANKRD30AQ9BXX3 1397 aa23.79■■□□□ 1.4
SPG7-218ENST00000568205 ADGRL2O95490 1459 aa23.79■■□□□ 1.4
SPG7-218ENST00000568205 DIP2CQ9Y2E4 1556 aa23.78■■□□□ 1.4
SPG7-218ENST00000568205 ABCA6Q8N139 1617 aa23.77■■□□□ 1.4
SPG7-218ENST00000568205 ROCK1Q13464 1354 aa23.77■■□□□ 1.4
SPG7-218ENST00000568205 NCOA1Q15788 1441 aa23.76■■□□□ 1.39
SPG7-218ENST00000568205 ATP10AO60312 1499 aa23.76■■□□□ 1.39
SPG7-218ENST00000568205 PLXNC1O60486 1568 aa23.76■■□□□ 1.39
SPG7-218ENST00000568205 TRIM26Q12899 539 aaPredicted RBP23.75■■□□□ 1.39
SPG7-218ENST00000568205 KIF15Q9NS87 1388 aa23.75■■□□□ 1.39
SPG7-218ENST00000568205 RRP7BPQ9NSQ0 103 aa23.74■■□□□ 1.39
SPG7-218ENST00000568205 A2MP01023 1474 aa23.72■■□□□ 1.39
SPG7-218ENST00000568205 ADGBQ8N7X0 1667 aa23.72■■□□□ 1.39
SPG7-218ENST00000568205 DHX29Q7Z478 1369 aaKnown RBP23.7■■□□□ 1.38
SPG7-218ENST00000568205 REREQ9P2R6 1566 aa23.69■■□□□ 1.38
SPG7-218ENST00000568205 DUOX2Q9NRD8 1548 aa23.69■■□□□ 1.38
SPG7-218ENST00000568205 HFM1A2PYH4 1435 aa23.65■■□□□ 1.38
SPG7-218ENST00000568205 NAIPQ13075 1403 aa23.64■■□□□ 1.37
SPG7-218ENST00000568205 ERBINQ96RT1 1412 aa23.64■■□□□ 1.37
SPG7-218ENST00000568205 AGLP35573 1532 aa23.64■■□□□ 1.37
SPG7-218ENST00000568205 ANKRD50Q9ULJ7 1429 aa23.63■■□□□ 1.37
SPG7-218ENST00000568205 ARID4BQ4LE39 1312 aaPredicted RBP23.61■■□□□ 1.37
SPG7-218ENST00000568205 SIGLEC1Q9BZZ2 1709 aa23.59■■□□□ 1.37
SPG7-218ENST00000568205 KIF3BO15066 747 aa23.58■■□□□ 1.37
SPG7-218ENST00000568205 GCC2Q8IWJ2 1684 aa23.56■■□□□ 1.36
SPG7-218ENST00000568205 EIF2AK4Q9P2K8 1649 aaKnown RBP23.55■■□□□ 1.36
SPG7-218ENST00000568205 SETD5Q9C0A6 1442 aa23.54■■□□□ 1.36
SPG7-218ENST00000568205 MLECQ14165 292 aa23.52■■□□□ 1.36
SPG7-218ENST00000568205 BCORL1Q5H9F3 1711 aa23.52■■□□□ 1.36
SPG7-218ENST00000568205 GGT6Q6P531 493 aa23.51■■□□□ 1.35
SPG7-218ENST00000568205 PCGF6Q9BYE7 350 aa23.5■■□□□ 1.35
SPG7-218ENST00000568205 RNF17Q9BXT8 1623 aaKnown RBP23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms