RNA–Protein interactions for RNA: ENST00000568151.1

SPG7-217, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 4

Gene SPG7, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-217ENST00000568151 SCAPERQ9BY12 1400 aa36.44■■■■□ 3.42
SPG7-217ENST00000568151 PREX2Q70Z35 1606 aa36.42■■■■□ 3.42
SPG7-217ENST00000568151 ZMYM4Q5VZL5 1548 aa36.4■■■■□ 3.42
SPG7-217ENST00000568151 POGZQ7Z3K3 1410 aa36.39■■■■□ 3.42
SPG7-217ENST00000568151 CDC42BPAQ5VT25 1732 aa36.38■■■■□ 3.41
SPG7-217ENST00000568151 ARHGEF40Q8TER5 1519 aa36.36■■■■□ 3.41
SPG7-217ENST00000568151 MTUS2Q5JR59 1369 aa36.34■■■■□ 3.41
SPG7-217ENST00000568151 VPS8Q8N3P4 1428 aa36.33■■■■□ 3.41
SPG7-217ENST00000568151 MAGI2Q86UL8 1455 aa36.29■■■■□ 3.4
SPG7-217ENST00000568151 ZFYVE16Q7Z3T8 1539 aa36.29■■■■□ 3.4
SPG7-217ENST00000568151 GPATCH8Q9UKJ3 1502 aaKnown RBP36.29■■■■□ 3.4
SPG7-217ENST00000568151 YEATS2Q9ULM3 1422 aa36.28■■■■□ 3.4
SPG7-217ENST00000568151 EHBP1L1Q8N3D4 1523 aa36.28■■■■□ 3.4
SPG7-217ENST00000568151 ABCC1P33527 1531 aa36.25■■■■□ 3.39
SPG7-217ENST00000568151 ZNF518AQ6AHZ1 1483 aa36.24■■■■□ 3.39
SPG7-217ENST00000568151 ARHGEF12Q9NZN5 1544 aa36.23■■■■□ 3.39
SPG7-217ENST00000568151 KDM5CP41229 1560 aa36.22■■■■□ 3.39
SPG7-217ENST00000568151 TIAM1Q13009 1591 aa36.21■■■■□ 3.39
SPG7-217ENST00000568151 AFAP1Q8N556 730 aa36.21■■■■□ 3.39
SPG7-217ENST00000568151 ITSN2Q9NZM3 1697 aa36.19■■■■□ 3.38
SPG7-217ENST00000568151 CCNB3Q8WWL7 1395 aa36.19■■■■□ 3.38
SPG7-217ENST00000568151 SAMD9LQ8IVG5 1584 aa36.18■■■■□ 3.38
SPG7-217ENST00000568151 ADAMTSL3P82987 1691 aa36.17■■■■□ 3.38
SPG7-217ENST00000568151 TRAPPC8Q9Y2L5 1435 aa36.17■■■■□ 3.38
SPG7-217ENST00000568151 BCORL1Q5H9F3 1711 aa36.16■■■■□ 3.38
SPG7-217ENST00000568151 SIGLEC1Q9BZZ2 1709 aa36.16■■■■□ 3.38
SPG7-217ENST00000568151 ARID4BQ4LE39 1312 aaPredicted RBP36.15■■■■□ 3.38
SPG7-217ENST00000568151 ZNF777Q9ULD5 760 aaPredicted RBP36.14■■■■□ 3.38
SPG7-217ENST00000568151 CFDP1Q9UEE9 299 aaPredicted RBP36.12■■■■□ 3.37
SPG7-217ENST00000568151 HECW2Q9P2P5 1572 aa36.11■■■■□ 3.37
SPG7-217ENST00000568151 ATP10AO60312 1499 aa36.1■■■■□ 3.37
SPG7-217ENST00000568151 SUPT6HQ7KZ85 1726 aaKnown RBP36.08■■■■□ 3.37
SPG7-217ENST00000568151 SYCP2Q9BX26 1530 aa36.08■■■■□ 3.37
SPG7-217ENST00000568151 NCOA2Q15596 1464 aa36.07■■■■□ 3.37
SPG7-217ENST00000568151 MLH3Q9UHC1 1453 aa36.07■■■■□ 3.37
SPG7-217ENST00000568151 MAP3K1Q13233 1512 aa36.07■■■■□ 3.36
SPG7-217ENST00000568151 LRRC9Q6ZRR7 1453 aa36.05■■■■□ 3.36
SPG7-217ENST00000568151 C9orf84Q5VXU9 1444 aa36.05■■■■□ 3.36
SPG7-217ENST00000568151 KIAA1107Q9UPP5 1409 aa36.04■■■■□ 3.36
SPG7-217ENST00000568151 MADDQ8WXG6 1647 aa36.04■■■■□ 3.36
SPG7-217ENST00000568151 DIP2CQ9Y2E4 1556 aa36.03■■■■□ 3.36
SPG7-217ENST00000568151 HNRNPMP52272 730 aaKnown RBP eCLIP36.02■■■■□ 3.362e-7■■■■□ 23.6
SPG7-217ENST00000568151 PLEKHH2Q8IVE3 1493 aa36.02■■■■□ 3.36
SPG7-217ENST00000568151 ABCA6Q8N139 1617 aa36.01■■■■□ 3.36
SPG7-217ENST00000568151 MYT1LQ9UL68 1186 aa36■■■■□ 3.35
SPG7-217ENST00000568151 KIDINS220Q9ULH0 1771 aa35.99■■■■□ 3.35
SPG7-217ENST00000568151 PTPRMP28827 1452 aa35.99■■■■□ 3.35
SPG7-217ENST00000568151 KANK4Q5T7N3 995 aaPredicted RBP35.98■■■■□ 3.35
SPG7-217ENST00000568151 ZNF644Q9H582 1327 aaPredicted RBP35.98■■■■□ 3.35
SPG7-217ENST00000568151 REREQ9P2R6 1566 aa35.93■■■■□ 3.34
SPG7-217ENST00000568151 RIMS1Q86UR5 1692 aaKnown RBP35.91■■■■□ 3.34
SPG7-217ENST00000568151 MLECQ14165 292 aa35.9■■■■□ 3.34
SPG7-217ENST00000568151 SPAG9O60271 1321 aaKnown RBP35.89■■■■□ 3.34
SPG7-217ENST00000568151 MBD5Q9P267 1494 aa35.89■■■■□ 3.34
SPG7-217ENST00000568151 INO80Q9ULG1 1556 aaPredicted RBP35.85■■■■□ 3.33
SPG7-217ENST00000568151 ATP7AQ04656 1500 aa35.85■■■■□ 3.33
SPG7-217ENST00000568151 CAMSAP2Q08AD1 1489 aa35.84■■■■□ 3.33
SPG7-217ENST00000568151 FER1L4A9Z1Z3 1794 aa35.84■■■■□ 3.33
SPG7-217ENST00000568151 AGLP35573 1532 aa35.82■■■■□ 3.32
SPG7-217ENST00000568151 APLP2Q06481 763 aa35.81■■■■□ 3.32
SPG7-217ENST00000568151 MYOM3Q5VTT5 1437 aa35.74■■■■□ 3.31
SPG7-217ENST00000568151 CCDC141Q6ZP82 1450 aa35.73■■■■□ 3.31
SPG7-217ENST00000568151 PLXNC1O60486 1568 aa35.69■■■■□ 3.3
SPG7-217ENST00000568151 ARHGEF5Q12774 1597 aa35.69■■■■□ 3.3
SPG7-217ENST00000568151 RTEL1-TNFRSF6BF6WH68 1400 aa35.69■■■■□ 3.3
SPG7-217ENST00000568151 MIA2Q96PC5 1412 aa35.69■■■■□ 3.3
SPG7-217ENST00000568151 A2MP01023 1474 aa35.68■■■■□ 3.3
SPG7-217ENST00000568151 RSPH4AQ5TD94 716 aa35.67■■■■□ 3.3
SPG7-217ENST00000568151 PLPPR3Q6T4P5 718 aa35.67■■■■□ 3.3
SPG7-217ENST00000568151 ADGBQ8N7X0 1667 aa35.66■■■■□ 3.3
SPG7-217ENST00000568151 CEBPAP49715 358 aaPredicted RBP35.57■■■■□ 3.28
SPG7-217ENST00000568151 LMTK3Q96Q04 1460 aa35.56■■■■□ 3.28
SPG7-217ENST00000568151 TSPY4P0CV99 314 aa35.53■■■■□ 3.28
SPG7-217ENST00000568151 TSPY10P0CW01 314 aa35.53■■■■□ 3.28
SPG7-217ENST00000568151 DHX29Q7Z478 1369 aaKnown RBP35.52■■■■□ 3.28
SPG7-217ENST00000568151 PTPN23Q9H3S7 1636 aa35.52■■■■□ 3.28
SPG7-217ENST00000568151 MAST1Q9Y2H9 1570 aa35.51■■■■□ 3.28
SPG7-217ENST00000568151 ESF1Q9H501 851 aaKnown RBP35.51■■■■□ 3.28
SPG7-217ENST00000568151 C3P01024 1663 aa35.51■■■■□ 3.28
SPG7-217ENST00000568151 FGD6Q6ZV73 1430 aa35.49■■■■□ 3.27
SPG7-217ENST00000568151 CNTLNQ9NXG0 1405 aa35.49■■■■□ 3.27
SPG7-217ENST00000568151 TCOF1Q13428 1488 aaKnown RBP35.45■■■■□ 3.27
SPG7-217ENST00000568151 GGT6Q6P531 493 aa35.44■■■■□ 3.26
SPG7-217ENST00000568151 MROH2AA6NES4 1674 aa35.43■■■■□ 3.26
SPG7-217ENST00000568151 CLTCQ00610 1675 aaKnown RBP35.42■■■■□ 3.26
SPG7-217ENST00000568151 PREX1Q8TCU6 1659 aa35.41■■■■□ 3.26
SPG7-217ENST00000568151 ABCC5O15440 1437 aa35.4■■■■□ 3.26
SPG7-217ENST00000568151 SETD1BQ9UPS6 1966 aaKnown RBP35.39■■■■□ 3.26
SPG7-217ENST00000568151 CROCC2H7BZ55 1655 aa35.39■■■■□ 3.26
SPG7-217ENST00000568151 KIF3BO15066 747 aa35.38■■■■□ 3.25
SPG7-217ENST00000568151 HSPA2P54652 639 aa35.37■■■■□ 3.25
SPG7-217ENST00000568151 PPP6R1Q9UPN7 881 aa35.37■■■■□ 3.25
SPG7-217ENST00000568151 ZMYM3Q14202 1370 aa35.37■■■■□ 3.25
SPG7-217ENST00000568151 DNMT1P26358 1616 aaKnown RBP35.36■■■■□ 3.25
SPG7-217ENST00000568151 SHANK2Q9UPX8 1470 aa35.35■■■■□ 3.25
SPG7-217ENST00000568151 DAPK1P53355 1430 aa35.34■■■■□ 3.25
SPG7-217ENST00000568151 UHRF1BP1Q6BDS2 1440 aa35.28■■■■□ 3.24
SPG7-217ENST00000568151 NPATQ14207 1427 aa35.27■■■■□ 3.24
SPG7-217ENST00000568151 DUOX2Q9NRD8 1548 aa35.25■■■■□ 3.23
SPG7-217ENST00000568151 EIF2AK4Q9P2K8 1649 aaKnown RBP35.24■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms