RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 MAGI2Q86UL8 1455 aa13.13□□□□□ -0.31
HDGFL3-205ENST00000568129 ADGRL1O94910 1474 aa13.12□□□□□ -0.31
HDGFL3-205ENST00000568129 VPS8Q8N3P4 1428 aa13.12□□□□□ -0.31
HDGFL3-205ENST00000568129 SCAPERQ9BY12 1400 aa13.12□□□□□ -0.31
HDGFL3-205ENST00000568129 GPATCH8Q9UKJ3 1502 aaKnown RBP13.11□□□□□ -0.31
HDGFL3-205ENST00000568129 POGZQ7Z3K3 1410 aa13.11□□□□□ -0.31
HDGFL3-205ENST00000568129 MAP3K1Q13233 1512 aa13.1□□□□□ -0.31
HDGFL3-205ENST00000568129 AEBP2Q6ZN18 517 aaPredicted RBP13.1□□□□□ -0.31
HDGFL3-205ENST00000568129 KDM5CP41229 1560 aa13.1□□□□□ -0.31
HDGFL3-205ENST00000568129 ARHGAP5Q13017 1502 aa13.09□□□□□ -0.31
HDGFL3-205ENST00000568129 ARHGEF40Q8TER5 1519 aa13.09□□□□□ -0.31
HDGFL3-205ENST00000568129 EHBP1L1Q8N3D4 1523 aa13.08□□□□□ -0.31
HDGFL3-205ENST00000568129 ADAMTSL3P82987 1691 aa13.08□□□□□ -0.32
HDGFL3-205ENST00000568129 ITSN2Q9NZM3 1697 aa13.08□□□□□ -0.32
HDGFL3-205ENST00000568129 ABCC1P33527 1531 aa13.08□□□□□ -0.32
HDGFL3-205ENST00000568129 TIAM1Q13009 1591 aa13.07□□□□□ -0.32
HDGFL3-205ENST00000568129 ZNF518AQ6AHZ1 1483 aa13.07□□□□□ -0.32
HDGFL3-205ENST00000568129 ARHGEF12Q9NZN5 1544 aa13.07□□□□□ -0.32
HDGFL3-205ENST00000568129 MTUS2Q5JR59 1369 aa13.07□□□□□ -0.32
HDGFL3-205ENST00000568129 BCORL1Q5H9F3 1711 aa13.06□□□□□ -0.32
HDGFL3-205ENST00000568129 SIGLEC1Q9BZZ2 1709 aa13.05□□□□□ -0.32
HDGFL3-205ENST00000568129 ZFYVE16Q7Z3T8 1539 aa13.05□□□□□ -0.32
HDGFL3-205ENST00000568129 SAMD9LQ8IVG5 1584 aa13.05□□□□□ -0.32
HDGFL3-205ENST00000568129 KIAA1107Q9UPP5 1409 aa13.05□□□□□ -0.32
HDGFL3-205ENST00000568129 MLH3Q9UHC1 1453 aa13.04□□□□□ -0.32
HDGFL3-205ENST00000568129 SUPT6HQ7KZ85 1726 aaKnown RBP13.04□□□□□ -0.32
HDGFL3-205ENST00000568129 YEATS2Q9ULM3 1422 aa13.04□□□□□ -0.32
HDGFL3-205ENST00000568129 TRAPPC8Q9Y2L5 1435 aa13.03□□□□□ -0.32
HDGFL3-205ENST00000568129 ATP10AO60312 1499 aa13.03□□□□□ -0.32
HDGFL3-205ENST00000568129 LRRC9Q6ZRR7 1453 aa13.03□□□□□ -0.32
HDGFL3-205ENST00000568129 REREQ9P2R6 1566 aa13.03□□□□□ -0.32
HDGFL3-205ENST00000568129 KIDINS220Q9ULH0 1771 aa13.02□□□□□ -0.32
HDGFL3-205ENST00000568129 AFAP1Q8N556 730 aa13.02□□□□□ -0.33
HDGFL3-205ENST00000568129 CCNB3Q8WWL7 1395 aa13.02□□□□□ -0.33
HDGFL3-205ENST00000568129 HECW2Q9P2P5 1572 aa13.02□□□□□ -0.33
HDGFL3-205ENST00000568129 PLEKHH2Q8IVE3 1493 aa13.01□□□□□ -0.33
HDGFL3-205ENST00000568129 NCOA2Q15596 1464 aa13□□□□□ -0.33
HDGFL3-205ENST00000568129 CFDP1Q9UEE9 299 aaPredicted RBP13□□□□□ -0.33
HDGFL3-205ENST00000568129 DIP2CQ9Y2E4 1556 aa12.99□□□□□ -0.33
HDGFL3-205ENST00000568129 MBD5Q9P267 1494 aa12.98□□□□□ -0.33
HDGFL3-205ENST00000568129 C9orf84Q5VXU9 1444 aa12.98□□□□□ -0.33
HDGFL3-205ENST00000568129 ABCA6Q8N139 1617 aa12.98□□□□□ -0.33
HDGFL3-205ENST00000568129 SYCP2Q9BX26 1530 aa12.98□□□□□ -0.33
HDGFL3-205ENST00000568129 KANK4Q5T7N3 995 aaPredicted RBP12.97□□□□□ -0.33
HDGFL3-205ENST00000568129 AGLP35573 1532 aa12.97□□□□□ -0.33
HDGFL3-205ENST00000568129 MADDQ8WXG6 1647 aa12.95□□□□□ -0.34
HDGFL3-205ENST00000568129 HNRNPMP52272 730 aaKnown RBP eCLIP12.95□□□□□ -0.34
HDGFL3-205ENST00000568129 PTPRMP28827 1452 aa12.95□□□□□ -0.34
HDGFL3-205ENST00000568129 INO80Q9ULG1 1556 aaPredicted RBP12.94□□□□□ -0.34
HDGFL3-205ENST00000568129 RSPH4AQ5TD94 716 aa12.94□□□□□ -0.34
HDGFL3-205ENST00000568129 ZNF644Q9H582 1327 aaPredicted RBP12.93□□□□□ -0.34
HDGFL3-205ENST00000568129 ZNF777Q9ULD5 760 aaPredicted RBP12.93□□□□□ -0.34
HDGFL3-205ENST00000568129 RTEL1-TNFRSF6BF6WH68 1400 aa12.93□□□□□ -0.34
HDGFL3-205ENST00000568129 FER1L4A9Z1Z3 1794 aa12.92□□□□□ -0.34
HDGFL3-205ENST00000568129 ARHGEF5Q12774 1597 aa12.92□□□□□ -0.34
HDGFL3-205ENST00000568129 MIA2Q96PC5 1412 aa12.92□□□□□ -0.34
HDGFL3-205ENST00000568129 SETD1BQ9UPS6 1966 aaKnown RBP12.92□□□□□ -0.34
HDGFL3-205ENST00000568129 ATP7AQ04656 1500 aa12.92□□□□□ -0.34
HDGFL3-205ENST00000568129 ARID4BQ4LE39 1312 aaPredicted RBP12.91□□□□□ -0.34
HDGFL3-205ENST00000568129 RIMS1Q86UR5 1692 aaKnown RBP12.91□□□□□ -0.34
HDGFL3-205ENST00000568129 ADGBQ8N7X0 1667 aa12.91□□□□□ -0.34
HDGFL3-205ENST00000568129 CAMSAP2Q08AD1 1489 aa12.91□□□□□ -0.34
HDGFL3-205ENST00000568129 SPAG9O60271 1321 aaKnown RBP12.9□□□□□ -0.34
HDGFL3-205ENST00000568129 PLXNC1O60486 1568 aa12.9□□□□□ -0.34
HDGFL3-205ENST00000568129 MYOM3Q5VTT5 1437 aa12.89□□□□□ -0.35
HDGFL3-205ENST00000568129 CCDC141Q6ZP82 1450 aa12.87□□□□□ -0.35
HDGFL3-205ENST00000568129 MAST1Q9Y2H9 1570 aa12.86□□□□□ -0.35
HDGFL3-205ENST00000568129 APLP2Q06481 763 aa12.86□□□□□ -0.35
HDGFL3-205ENST00000568129 A2MP01023 1474 aa12.85□□□□□ -0.35
HDGFL3-205ENST00000568129 MYT1LQ9UL68 1186 aa12.84□□□□□ -0.35
HDGFL3-205ENST00000568129 TCOF1Q13428 1488 aaKnown RBP12.84□□□□□ -0.35
HDGFL3-205ENST00000568129 MROH2AA6NES4 1674 aa12.83□□□□□ -0.35
HDGFL3-205ENST00000568129 DHX29Q7Z478 1369 aaKnown RBP12.83□□□□□ -0.36
HDGFL3-205ENST00000568129 PPP6R1Q9UPN7 881 aa12.83□□□□□ -0.36
HDGFL3-205ENST00000568129 PTPN23Q9H3S7 1636 aa12.83□□□□□ -0.36
HDGFL3-205ENST00000568129 MLECQ14165 292 aa12.82□□□□□ -0.36
HDGFL3-205ENST00000568129 C3P01024 1663 aa12.82□□□□□ -0.36
HDGFL3-205ENST00000568129 CNTLNQ9NXG0 1405 aa12.81□□□□□ -0.36
HDGFL3-205ENST00000568129 FGD6Q6ZV73 1430 aa12.8□□□□□ -0.36
HDGFL3-205ENST00000568129 CROCC2H7BZ55 1655 aa12.8□□□□□ -0.36
HDGFL3-205ENST00000568129 LMTK3Q96Q04 1460 aa12.8□□□□□ -0.36
HDGFL3-205ENST00000568129 TSPY4P0CV99 314 aa12.8□□□□□ -0.36
HDGFL3-205ENST00000568129 TSPY10P0CW01 314 aa12.8□□□□□ -0.36
HDGFL3-205ENST00000568129 SHANK2Q9UPX8 1470 aa12.78□□□□□ -0.36
HDGFL3-205ENST00000568129 FAM135AQ9P2D6 1515 aa12.78□□□□□ -0.36
HDGFL3-205ENST00000568129 DNMT1P26358 1616 aaKnown RBP12.78□□□□□ -0.36
HDGFL3-205ENST00000568129 PREX1Q8TCU6 1659 aa12.78□□□□□ -0.36
HDGFL3-205ENST00000568129 ABCC5O15440 1437 aa12.78□□□□□ -0.36
HDGFL3-205ENST00000568129 EIF2AK4Q9P2K8 1649 aaKnown RBP12.76□□□□□ -0.37
HDGFL3-205ENST00000568129 CLTCQ00610 1675 aaKnown RBP12.76□□□□□ -0.37
HDGFL3-205ENST00000568129 CEBPAP49715 358 aaPredicted RBP12.75□□□□□ -0.37
HDGFL3-205ENST00000568129 ZMYM3Q14202 1370 aa12.75□□□□□ -0.37
HDGFL3-205ENST00000568129 RNF17Q9BXT8 1623 aaKnown RBP12.75□□□□□ -0.37
HDGFL3-205ENST00000568129 DAPK1P53355 1430 aa12.74□□□□□ -0.37
HDGFL3-205ENST00000568129 NPATQ14207 1427 aa12.74□□□□□ -0.37
HDGFL3-205ENST00000568129 DUOX2Q9NRD8 1548 aa12.73□□□□□ -0.37
HDGFL3-205ENST00000568129 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.71□□□□□ -0.37
HDGFL3-205ENST00000568129 KIF3BO15066 747 aa12.71□□□□□ -0.37
HDGFL3-205ENST00000568129 GGT6Q6P531 493 aa12.71□□□□□ -0.37
HDGFL3-205ENST00000568129 ESF1Q9H501 851 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms