RNA–Protein interactions for RNA: ENST00000567999.5

DEF8-221, Transcript of differentially expressed in FDCP 8 homolog, human

TSL 1 (best)

Gene DEF8, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DEF8-221	ENST00000567999	KDM4F	A0A1W2PPD8	638 aa		34.64	■■■■□ 3.14
DEF8-221	ENST00000567999	AEBP2	Q6ZN18	517 aa	Predicted RBP	34.64	■■■■□ 3.14
DEF8-221	ENST00000567999	EFCAB2	Q5VUJ9	269 aa		34.61	■■■■□ 3.13
DEF8-221	ENST00000567999	SCAPER	Q9BY12	1400 aa		34.6	■■■■□ 3.13
DEF8-221	ENST00000567999	MTUS2	Q5JR59	1369 aa		34.59	■■■■□ 3.13
DEF8-221	ENST00000567999	POGZ	Q7Z3K3	1410 aa		34.57	■■■■□ 3.13
DEF8-221	ENST00000567999	EHBP1L1	Q8N3D4	1523 aa		34.56	■■■■□ 3.12
DEF8-221	ENST00000567999	ZMYM4	Q5VZL5	1548 aa		34.55	■■■■□ 3.12
DEF8-221	ENST00000567999	ARHGEF40	Q8TER5	1519 aa		34.55	■■■■□ 3.12
DEF8-221	ENST00000567999	TIAM1	Q13009	1591 aa		34.53	■■■■□ 3.12
DEF8-221	ENST00000567999	GPATCH8	Q9UKJ3	1502 aa	Known RBP	34.5	■■■■□ 3.11
DEF8-221	ENST00000567999	ABCC1	P33527	1531 aa		34.49	■■■■□ 3.11
DEF8-221	ENST00000567999	YEATS2	Q9ULM3	1422 aa		34.46	■■■■□ 3.11
DEF8-221	ENST00000567999	ZFYVE16	Q7Z3T8	1539 aa		34.45	■■■■□ 3.11
DEF8-221	ENST00000567999	ITSN2	Q9NZM3	1697 aa		34.45	■■■■□ 3.11
DEF8-221	ENST00000567999	ARHGEF12	Q9NZN5	1544 aa		34.45	■■■■□ 3.1
DEF8-221	ENST00000567999	SAMD9L	Q8IVG5	1584 aa		34.45	■■■■□ 3.1
DEF8-221	ENST00000567999	CCNB3	Q8WWL7	1395 aa		34.42	■■■■□ 3.1
DEF8-221	ENST00000567999	ZNF518A	Q6AHZ1	1483 aa		34.41	■■■■□ 3.1
DEF8-221	ENST00000567999	KDM5C	P41229	1560 aa		34.4	■■■■□ 3.1
DEF8-221	ENST00000567999	SIGLEC1	Q9BZZ2	1709 aa		34.4	■■■■□ 3.1
DEF8-221	ENST00000567999	SUPT6H	Q7KZ85	1726 aa	Known RBP	34.39	■■■■□ 3.1
DEF8-221	ENST00000567999	MAGI2	Q86UL8	1455 aa		34.39	■■■■□ 3.1
DEF8-221	ENST00000567999	AFAP1	Q8N556	730 aa		34.38	■■■■□ 3.09
DEF8-221	ENST00000567999	ZNF777	Q9ULD5	760 aa	Predicted RBP	34.38	■■■■□ 3.09
DEF8-221	ENST00000567999	TRAPPC8	Q9Y2L5	1435 aa		34.38	■■■■□ 3.09
DEF8-221	ENST00000567999	LRRC9	Q6ZRR7	1453 aa		34.36	■■■■□ 3.09
DEF8-221	ENST00000567999	SYCP2	Q9BX26	1530 aa		34.35	■■■■□ 3.09
DEF8-221	ENST00000567999	NCOA2	Q15596	1464 aa		34.35	■■■■□ 3.09
DEF8-221	ENST00000567999	HECW2	Q9P2P5	1572 aa		34.33	■■■■□ 3.09
DEF8-221	ENST00000567999	CFDP1	Q9UEE9	299 aa	Predicted RBP	34.33	■■■■□ 3.09
DEF8-221	ENST00000567999	MAP3K1	Q13233	1512 aa		34.32	■■■■□ 3.08
DEF8-221	ENST00000567999	BCORL1	Q5H9F3	1711 aa		34.3	■■■■□ 3.08
DEF8-221	ENST00000567999	KANK4	Q5T7N3	995 aa	Predicted RBP	34.29	■■■■□ 3.08
DEF8-221	ENST00000567999	ARID4B	Q4LE39	1312 aa	Predicted RBP	34.29	■■■■□ 3.08
DEF8-221	ENST00000567999	ADAMTSL3	P82987	1691 aa		34.28	■■■■□ 3.08
DEF8-221	ENST00000567999	ABCA6	Q8N139	1617 aa		34.26	■■■■□ 3.07
DEF8-221	ENST00000567999	DIP2C	Q9Y2E4	1556 aa		34.25	■■■■□ 3.07
DEF8-221	ENST00000567999	HNRNPM	P52272	730 aa	Known RBP eCLIP	34.24	■■■■□ 3.07
DEF8-221	ENST00000567999	ZNF644	Q9H582	1327 aa	Predicted RBP	34.24	■■■■□ 3.07
DEF8-221	ENST00000567999	ATP10A	O60312	1499 aa		34.23	■■■■□ 3.07
DEF8-221	ENST00000567999	MLH3	Q9UHC1	1453 aa		34.23	■■■■□ 3.07
DEF8-221	ENST00000567999	PLEKHH2	Q8IVE3	1493 aa		34.21	■■■■□ 3.07
DEF8-221	ENST00000567999	KIDINS220	Q9ULH0	1771 aa		34.21	■■■■□ 3.07
DEF8-221	ENST00000567999	MYT1L	Q9UL68	1186 aa		34.21	■■■■□ 3.07
DEF8-221	ENST00000567999	MADD	Q8WXG6	1647 aa		34.21	■■■■□ 3.07
DEF8-221	ENST00000567999	C9orf84	Q5VXU9	1444 aa		34.21	■■■■□ 3.07
DEF8-221	ENST00000567999	KIAA1107	Q9UPP5	1409 aa		34.21	■■■■□ 3.07
DEF8-221	ENST00000567999	CAMSAP2	Q08AD1	1489 aa		34.14	■■■■□ 3.06
DEF8-221	ENST00000567999	MBD5	Q9P267	1494 aa		34.12	■■■■□ 3.05
DEF8-221	ENST00000567999	INO80	Q9ULG1	1556 aa	Predicted RBP	34.11	■■■■□ 3.05
DEF8-221	ENST00000567999	APLP2	Q06481	763 aa		34.11	■■■■□ 3.05
DEF8-221	ENST00000567999	RIMS1	Q86UR5	1692 aa	Known RBP	34.11	■■■■□ 3.05
DEF8-221	ENST00000567999	RERE	Q9P2R6	1566 aa		34.1	■■■■□ 3.05
DEF8-221	ENST00000567999	ATP7A	Q04656	1500 aa		34.09	■■■■□ 3.05
DEF8-221	ENST00000567999	MLEC	Q14165	292 aa		34.09	■■■■□ 3.05
DEF8-221	ENST00000567999	PTPRM	P28827	1452 aa		34.08	■■■■□ 3.05
DEF8-221	ENST00000567999	SPAG9	O60271	1321 aa	Known RBP	34.08	■■■■□ 3.05
DEF8-221	ENST00000567999	FER1L4	A9Z1Z3	1794 aa		34.05	■■■■□ 3.04
DEF8-221	ENST00000567999	MYOM3	Q5VTT5	1437 aa		34.03	■■■■□ 3.04
DEF8-221	ENST00000567999	CCDC141	Q6ZP82	1450 aa		33.99	■■■■□ 3.03
DEF8-221	ENST00000567999	AGL	P35573	1532 aa		33.97	■■■■□ 3.03
DEF8-221	ENST00000567999	ARHGEF5	Q12774	1597 aa		33.96	■■■■□ 3.03
DEF8-221	ENST00000567999	PLXNC1	O60486	1568 aa		33.94	■■■■□ 3.02
DEF8-221	ENST00000567999	MIA2	Q96PC5	1412 aa		33.93	■■■■□ 3.02
DEF8-221	ENST00000567999	ADGB	Q8N7X0	1667 aa		33.92	■■■■□ 3.02
DEF8-221	ENST00000567999	A2M	P01023	1474 aa		33.89	■■■■□ 3.02
DEF8-221	ENST00000567999	PLPPR3	Q6T4P5	718 aa		33.89	■■■■□ 3.02
DEF8-221	ENST00000567999	RTEL1-TNFRSF6B	F6WH68	1400 aa		33.87	■■■■□ 3.01
DEF8-221	ENST00000567999	PTPN23	Q9H3S7	1636 aa		33.87	■■■■□ 3.01
DEF8-221	ENST00000567999	FGD6	Q6ZV73	1430 aa		33.82	■■■■□ 3
DEF8-221	ENST00000567999	RSPH4A	Q5TD94	716 aa		33.81	■■■■□ 3
DEF8-221	ENST00000567999	MAST1	Q9Y2H9	1570 aa		33.78	■■■■□ 3
DEF8-221	ENST00000567999	CROCC2	H7BZ55	1655 aa		33.76	■■■□□ 2.99
DEF8-221	ENST00000567999	TCOF1	Q13428	1488 aa	Known RBP	33.76	■■■□□ 2.99
DEF8-221	ENST00000567999	TSPY4	P0CV99	314 aa		33.74	■■■□□ 2.99
DEF8-221	ENST00000567999	TSPY10	P0CW01	314 aa		33.74	■■■□□ 2.99
DEF8-221	ENST00000567999	CEBPA	P49715	358 aa	Predicted RBP	33.74	■■■□□ 2.99
DEF8-221	ENST00000567999	C3	P01024	1663 aa		33.73	■■■□□ 2.99
DEF8-221	ENST00000567999	DHX29	Q7Z478	1369 aa	Known RBP	33.72	■■■□□ 2.99
DEF8-221	ENST00000567999	DNMT1	P26358	1616 aa	Known RBP	33.7	■■■□□ 2.99
DEF8-221	ENST00000567999	ABCC5	O15440	1437 aa		33.7	■■■□□ 2.98
DEF8-221	ENST00000567999	LMTK3	Q96Q04	1460 aa		33.69	■■■□□ 2.98
DEF8-221	ENST00000567999	CLTC	Q00610	1675 aa	Known RBP	33.69	■■■□□ 2.98
DEF8-221	ENST00000567999	PPARGC1B	Q86YN6	1023 aa	Known RBP	33.69	■■■□□ 2.98
DEF8-221	ENST00000567999	DAPK1	P53355	1430 aa		33.66	■■■□□ 2.98
DEF8-221	ENST00000567999	GGT6	Q6P531	493 aa		33.66	■■■□□ 2.98
DEF8-221	ENST00000567999	ESF1	Q9H501	851 aa	Known RBP	33.66	■■■□□ 2.98
DEF8-221	ENST00000567999	MROH2A	A6NES4	1674 aa		33.64	■■■□□ 2.98
DEF8-221	ENST00000567999	SHANK2	Q9UPX8	1470 aa		33.64	■■■□□ 2.98
DEF8-221	ENST00000567999	CNTLN	Q9NXG0	1405 aa		33.63	■■■□□ 2.97
DEF8-221	ENST00000567999	KIF3B	O15066	747 aa		33.6	■■■□□ 2.97
DEF8-221	ENST00000567999	PREX1	Q8TCU6	1659 aa		33.6	■■■□□ 2.97
DEF8-221	ENST00000567999	FAM50A	Q14320	339 aa	Known RBP	33.56	■■■□□ 2.96
DEF8-221	ENST00000567999	ZMYM3	Q14202	1370 aa		33.54	■■■□□ 2.96
DEF8-221	ENST00000567999	EIF2AK4	Q9P2K8	1649 aa	Known RBP	33.53	■■■□□ 2.96
DEF8-221	ENST00000567999	RNF17	Q9BXT8	1623 aa	Known RBP	33.53	■■■□□ 2.96
DEF8-221	ENST00000567999	DUOX2	Q9NRD8	1548 aa		33.53	■■■□□ 2.96
DEF8-221	ENST00000567999	KIF15	Q9NS87	1388 aa		33.52	■■■□□ 2.96
DEF8-221	ENST00000567999	HSPA2	P54652	639 aa		33.51	■■■□□ 2.95

Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms