RNA–Protein interactions for RNA: ENST00000567648.1

VAC14-209, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 3

Gene VAC14, Length 702 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-209ENST00000567648 POGZQ7Z3K3 1410 aa28■■■□□ 2.07
VAC14-209ENST00000567648 CASKIN1Q8WXD9 1431 aa28■■■□□ 2.07
VAC14-209ENST00000567648 PTPRMP28827 1452 aa27.99■■■□□ 2.07
VAC14-209ENST00000567648 RIMS1Q86UR5 1692 aaKnown RBP27.98■■■□□ 2.07
VAC14-209ENST00000567648 SCAPERQ9BY12 1400 aa27.98■■■□□ 2.07
VAC14-209ENST00000567648 CLIP1P30622 1438 aa27.93■■■□□ 2.06
VAC14-209ENST00000567648 ARHGAP5Q13017 1502 aa27.93■■■□□ 2.06
VAC14-209ENST00000567648 PREX2Q70Z35 1606 aa27.93■■■□□ 2.06
VAC14-209ENST00000567648 CDC42BPAQ5VT25 1732 aa27.92■■■□□ 2.06
VAC14-209ENST00000567648 ARID4BQ4LE39 1312 aaPredicted RBP27.91■■■□□ 2.06
VAC14-209ENST00000567648 CCDC18Q5T9S5 1454 aa27.9■■■□□ 2.06
VAC14-209ENST00000567648 FYCO1Q9BQS8 1478 aa27.9■■■□□ 2.06
VAC14-209ENST00000567648 KDM5CP41229 1560 aa27.87■■■□□ 2.05
VAC14-209ENST00000567648 ARHGEF12Q9NZN5 1544 aa27.87■■■□□ 2.05
VAC14-209ENST00000567648 CDK11AQ9UQ88 783 aaPredicted RBP27.86■■■□□ 2.05
VAC14-209ENST00000567648 ITSN2Q9NZM3 1697 aa27.85■■■□□ 2.05
VAC14-209ENST00000567648 MAGI2Q86UL8 1455 aa27.85■■■□□ 2.05
VAC14-209ENST00000567648 FER1L4A9Z1Z3 1794 aa27.84■■■□□ 2.05
VAC14-209ENST00000567648 ABCC1P33527 1531 aa27.84■■■□□ 2.05
VAC14-209ENST00000567648 EFCAB2Q5VUJ9 269 aa27.83■■■□□ 2.05
VAC14-209ENST00000567648 ABCA6Q8N139 1617 aa27.81■■■□□ 2.04
VAC14-209ENST00000567648 DIP2CQ9Y2E4 1556 aa27.81■■■□□ 2.04
VAC14-209ENST00000567648 AFAP1Q8N556 730 aa27.79■■■□□ 2.04
VAC14-209ENST00000567648 ZNF518AQ6AHZ1 1483 aa27.78■■■□□ 2.04
VAC14-209ENST00000567648 TRAPPC8Q9Y2L5 1435 aa27.78■■■□□ 2.04
VAC14-209ENST00000567648 SAMD9LQ8IVG5 1584 aa27.77■■■□□ 2.04
VAC14-209ENST00000567648 ATP10AO60312 1499 aa27.76■■■□□ 2.04
VAC14-209ENST00000567648 LMTK3Q96Q04 1460 aa27.76■■■□□ 2.04
VAC14-209ENST00000567648 MLECQ14165 292 aa27.76■■■□□ 2.03
VAC14-209ENST00000567648 C9orf84Q5VXU9 1444 aa27.75■■■□□ 2.03
VAC14-209ENST00000567648 PLPPR3Q6T4P5 718 aa27.73■■■□□ 2.03
VAC14-209ENST00000567648 KIDINS220Q9ULH0 1771 aa27.73■■■□□ 2.03
VAC14-209ENST00000567648 CEP162Q5TB80 1403 aa27.71■■■□□ 2.03
VAC14-209ENST00000567648 GPATCH8Q9UKJ3 1502 aaKnown RBP27.7■■■□□ 2.02
VAC14-209ENST00000567648 SYCP2Q9BX26 1530 aa27.69■■■□□ 2.02
VAC14-209ENST00000567648 MLH3Q9UHC1 1453 aa27.65■■■□□ 2.02
VAC14-209ENST00000567648 ILDR1Q86SU0 546 aaPredicted RBP27.65■■■□□ 2.02
VAC14-209ENST00000567648 REREQ9P2R6 1566 aa27.65■■■□□ 2.02
VAC14-209ENST00000567648 TIAM1Q13009 1591 aa27.63■■■□□ 2.01
VAC14-209ENST00000567648 ZNF777Q9ULD5 760 aaPredicted RBP27.59■■■□□ 2.01
VAC14-209ENST00000567648 HSPA2P54652 639 aa27.58■■■□□ 2.01
VAC14-209ENST00000567648 EHBP1L1Q8N3D4 1523 aa27.57■■■□□ 2
VAC14-209ENST00000567648 LOC105371045A0A1W2PR82 267 aa27.56■■■□□ 2
VAC14-209ENST00000567648 CEBPAP49715 358 aaPredicted RBP27.56■■■□□ 2
VAC14-209ENST00000567648 MYT1LQ9UL68 1186 aa27.55■■■□□ 2
VAC14-209ENST00000567648 MTUS2Q5JR59 1369 aa27.55■■■□□ 2
VAC14-209ENST00000567648 INO80Q9ULG1 1556 aaPredicted RBP27.55■■■□□ 2
VAC14-209ENST00000567648 C3P01024 1663 aa27.55■■■□□ 2
VAC14-209ENST00000567648 HNRNPMP52272 730 aaKnown RBP eCLIP27.53■■■□□ 2
VAC14-209ENST00000567648 PREX1Q8TCU6 1659 aa27.52■■■□□ 2
VAC14-209ENST00000567648 AGLP35573 1532 aa27.52■■■□□ 2
VAC14-209ENST00000567648 SUPT6HQ7KZ85 1726 aaKnown RBP27.52■■■□□ 2
VAC14-209ENST00000567648 CCNB3Q8WWL7 1395 aa27.5■■□□□ 1.99
VAC14-209ENST00000567648 ZNF644Q9H582 1327 aaPredicted RBP27.5■■□□□ 1.99
VAC14-209ENST00000567648 ATP7AQ04656 1500 aa27.5■■□□□ 1.99
VAC14-209ENST00000567648 PLXNC1O60486 1568 aa27.46■■□□□ 1.99
VAC14-209ENST00000567648 CFDP1Q9UEE9 299 aaPredicted RBP27.45■■□□□ 1.98
VAC14-209ENST00000567648 KIAA1107Q9UPP5 1409 aa27.44■■□□□ 1.98
VAC14-209ENST00000567648 MBD5Q9P267 1494 aa27.43■■□□□ 1.98
VAC14-209ENST00000567648 NCOA2Q15596 1464 aa27.42■■□□□ 1.98
VAC14-209ENST00000567648 STRCQ7RTU9 1775 aa27.41■■□□□ 1.98
VAC14-209ENST00000567648 SPAG9O60271 1321 aaKnown RBP27.41■■□□□ 1.98
VAC14-209ENST00000567648 ADGBQ8N7X0 1667 aa27.4■■□□□ 1.98
VAC14-209ENST00000567648 PLEKHH2Q8IVE3 1493 aa27.39■■□□□ 1.98
VAC14-209ENST00000567648 CLTCQ00610 1675 aaKnown RBP27.37■■□□□ 1.97
VAC14-209ENST00000567648 VPS8Q8N3P4 1428 aa27.37■■□□□ 1.97
VAC14-209ENST00000567648 MROH2AA6NES4 1674 aa27.34■■□□□ 1.97
VAC14-209ENST00000567648 A2MP01023 1474 aa27.34■■□□□ 1.97
VAC14-209ENST00000567648 CAMSAP2Q08AD1 1489 aa27.34■■□□□ 1.97
VAC14-209ENST00000567648 SETD1BQ9UPS6 1966 aaKnown RBP27.31■■□□□ 1.96
VAC14-209ENST00000567648 LRRC9Q6ZRR7 1453 aa27.3■■□□□ 1.96
VAC14-209ENST00000567648 UHRF1BP1Q6BDS2 1440 aa27.29■■□□□ 1.96
VAC14-209ENST00000567648 KANK4Q5T7N3 995 aaPredicted RBP27.26■■□□□ 1.95
VAC14-209ENST00000567648 CCDC141Q6ZP82 1450 aa27.24■■□□□ 1.95
VAC14-209ENST00000567648 CNTLNQ9NXG0 1405 aa27.24■■□□□ 1.95
VAC14-209ENST00000567648 MYO3AQ8NEV4 1616 aa27.21■■□□□ 1.95
VAC14-209ENST00000567648 ARHGEF5Q12774 1597 aa27.2■■□□□ 1.94
VAC14-209ENST00000567648 ZMYM3Q14202 1370 aa27.2■■□□□ 1.94
VAC14-209ENST00000567648 RTEL1-TNFRSF6BF6WH68 1400 aa27.19■■□□□ 1.94
VAC14-209ENST00000567648 FBXO41Q8TF61 875 aa27.18■■□□□ 1.94
VAC14-209ENST00000567648 GGT6Q6P531 493 aa27.17■■□□□ 1.94
VAC14-209ENST00000567648 ESF1Q9H501 851 aaKnown RBP27.17■■□□□ 1.94
VAC14-209ENST00000567648 MAP3K1Q13233 1512 aa27.16■■□□□ 1.94
VAC14-209ENST00000567648 ZNF142P52746 1687 aaPredicted RBP27.15■■□□□ 1.94
VAC14-209ENST00000567648 PTPRKQ15262 1439 aa27.15■■□□□ 1.94
VAC14-209ENST00000567648 NPATQ14207 1427 aa27.14■■□□□ 1.93
VAC14-209ENST00000567648 CAMSAP1Q5T5Y3 1602 aa27.12■■□□□ 1.93
VAC14-209ENST00000567648 DHX29Q7Z478 1369 aaKnown RBP27.12■■□□□ 1.93
VAC14-209ENST00000567648 NCOA1Q15788 1441 aa27.1■■□□□ 1.93
VAC14-209ENST00000567648 CEP170BQ9Y4F5 1589 aaPredicted RBP27.09■■□□□ 1.93
VAC14-209ENST00000567648 MAST1Q9Y2H9 1570 aa27.08■■□□□ 1.93
VAC14-209ENST00000567648 MYOM3Q5VTT5 1437 aa27.07■■□□□ 1.92
VAC14-209ENST00000567648 KIF3BO15066 747 aa27.04■■□□□ 1.92
VAC14-209ENST00000567648 CERKQ8TCT0 537 aa27.04■■□□□ 1.92
VAC14-209ENST00000567648 KDM5DQ9BY66 1539 aa27.04■■□□□ 1.92
VAC14-209ENST00000567648 CROCC2H7BZ55 1655 aa27.04■■□□□ 1.92
VAC14-209ENST00000567648 MROH1Q8NDA8 1641 aa27.03■■□□□ 1.92
VAC14-209ENST00000567648 RNF17Q9BXT8 1623 aaKnown RBP27.02■■□□□ 1.92
VAC14-209ENST00000567648 PTPRTO14522 1441 aa27.01■■□□□ 1.91
VAC14-209ENST00000567648 LTBP4Q8N2S1 1624 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms