RNA–Protein interactions for RNA: ENST00000567638.1

SCAMP2-209, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 678 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-209ENST00000567638 MADDQ8WXG6 1647 aa24.6■■□□□ 1.53
SCAMP2-209ENST00000567638 POGZQ7Z3K3 1410 aa24.59■■□□□ 1.53
SCAMP2-209ENST00000567638 MAGI2Q86UL8 1455 aa24.58■■□□□ 1.53
SCAMP2-209ENST00000567638 SCAPERQ9BY12 1400 aa24.58■■□□□ 1.53
SCAMP2-209ENST00000567638 SIGLEC1Q9BZZ2 1709 aa24.57■■□□□ 1.52
SCAMP2-209ENST00000567638 CDC42BPBQ9Y5S2 1711 aa24.57■■□□□ 1.52
SCAMP2-209ENST00000567638 PTPRMP28827 1452 aa24.57■■□□□ 1.52
SCAMP2-209ENST00000567638 FYCO1Q9BQS8 1478 aa24.56■■□□□ 1.52
SCAMP2-209ENST00000567638 YEATS2Q9ULM3 1422 aa24.55■■□□□ 1.52
SCAMP2-209ENST00000567638 ARID4BQ4LE39 1312 aaPredicted RBP24.55■■□□□ 1.52
SCAMP2-209ENST00000567638 ARHGAP5Q13017 1502 aa24.55■■□□□ 1.52
SCAMP2-209ENST00000567638 EFCAB2Q5VUJ9 269 aa24.54■■□□□ 1.52
SCAMP2-209ENST00000567638 PREX2Q70Z35 1606 aa24.53■■□□□ 1.52
SCAMP2-209ENST00000567638 RIMS1Q86UR5 1692 aaKnown RBP24.53■■□□□ 1.52
SCAMP2-209ENST00000567638 CDC42BPAQ5VT25 1732 aa24.49■■□□□ 1.51
SCAMP2-209ENST00000567638 KDM5CP41229 1560 aa24.48■■□□□ 1.51
SCAMP2-209ENST00000567638 ZNF518AQ6AHZ1 1483 aa24.47■■□□□ 1.51
SCAMP2-209ENST00000567638 FER1L4A9Z1Z3 1794 aa24.45■■□□□ 1.5
SCAMP2-209ENST00000567638 ITSN2Q9NZM3 1697 aa24.44■■□□□ 1.5
SCAMP2-209ENST00000567638 ABCC1P33527 1531 aa24.43■■□□□ 1.5
SCAMP2-209ENST00000567638 ATP10AO60312 1499 aa24.43■■□□□ 1.5
SCAMP2-209ENST00000567638 C9orf84Q5VXU9 1444 aa24.42■■□□□ 1.5
SCAMP2-209ENST00000567638 DIP2CQ9Y2E4 1556 aa24.37■■□□□ 1.49
SCAMP2-209ENST00000567638 ABCA6Q8N139 1617 aa24.36■■□□□ 1.49
SCAMP2-209ENST00000567638 ARHGEF12Q9NZN5 1544 aa24.35■■□□□ 1.49
SCAMP2-209ENST00000567638 AFAP1Q8N556 730 aa24.35■■□□□ 1.49
SCAMP2-209ENST00000567638 REREQ9P2R6 1566 aa24.34■■□□□ 1.49
SCAMP2-209ENST00000567638 LMTK3Q96Q04 1460 aa24.33■■□□□ 1.49
SCAMP2-209ENST00000567638 MLH3Q9UHC1 1453 aa24.33■■□□□ 1.49
SCAMP2-209ENST00000567638 SAMD9LQ8IVG5 1584 aa24.33■■□□□ 1.48
SCAMP2-209ENST00000567638 MLECQ14165 292 aa24.32■■□□□ 1.48
SCAMP2-209ENST00000567638 TRAPPC8Q9Y2L5 1435 aa24.32■■□□□ 1.48
SCAMP2-209ENST00000567638 CEP162Q5TB80 1403 aa24.31■■□□□ 1.48
SCAMP2-209ENST00000567638 KIDINS220Q9ULH0 1771 aa24.31■■□□□ 1.48
SCAMP2-209ENST00000567638 GPATCH8Q9UKJ3 1502 aaKnown RBP24.3■■□□□ 1.48
SCAMP2-209ENST00000567638 SYCP2Q9BX26 1530 aa24.27■■□□□ 1.48
SCAMP2-209ENST00000567638 MYT1LQ9UL68 1186 aa24.27■■□□□ 1.48
SCAMP2-209ENST00000567638 MTUS2Q5JR59 1369 aa24.25■■□□□ 1.47
SCAMP2-209ENST00000567638 EHBP1L1Q8N3D4 1523 aa24.25■■□□□ 1.47
SCAMP2-209ENST00000567638 AGLP35573 1532 aa24.24■■□□□ 1.47
SCAMP2-209ENST00000567638 PLPPR3Q6T4P5 718 aa24.23■■□□□ 1.47
SCAMP2-209ENST00000567638 PREX1Q8TCU6 1659 aa24.21■■□□□ 1.47
SCAMP2-209ENST00000567638 TIAM1Q13009 1591 aa24.21■■□□□ 1.47
SCAMP2-209ENST00000567638 CCNB3Q8WWL7 1395 aa24.21■■□□□ 1.47
SCAMP2-209ENST00000567638 ZNF777Q9ULD5 760 aaPredicted RBP24.21■■□□□ 1.47
SCAMP2-209ENST00000567638 ILDR1Q86SU0 546 aaPredicted RBP24.2■■□□□ 1.46
SCAMP2-209ENST00000567638 PLEKHH2Q8IVE3 1493 aa24.19■■□□□ 1.46
SCAMP2-209ENST00000567638 INO80Q9ULG1 1556 aaPredicted RBP24.18■■□□□ 1.46
SCAMP2-209ENST00000567638 KIAA1107Q9UPP5 1409 aa24.18■■□□□ 1.46
SCAMP2-209ENST00000567638 CFDP1Q9UEE9 299 aaPredicted RBP24.17■■□□□ 1.46
SCAMP2-209ENST00000567638 C3P01024 1663 aa24.16■■□□□ 1.46
SCAMP2-209ENST00000567638 ATP7AQ04656 1500 aa24.15■■□□□ 1.46
SCAMP2-209ENST00000567638 SUPT6HQ7KZ85 1726 aaKnown RBP24.14■■□□□ 1.45
SCAMP2-209ENST00000567638 HNRNPMP52272 730 aaKnown RBP eCLIP24.13■■□□□ 1.45
SCAMP2-209ENST00000567638 SETD1BQ9UPS6 1966 aaKnown RBP24.12■■□□□ 1.45
SCAMP2-209ENST00000567638 SPAG9O60271 1321 aaKnown RBP24.12■■□□□ 1.45
SCAMP2-209ENST00000567638 HSPA2P54652 639 aa24.12■■□□□ 1.45
SCAMP2-209ENST00000567638 CEBPAP49715 358 aaPredicted RBP24.1■■□□□ 1.45
SCAMP2-209ENST00000567638 ADGBQ8N7X0 1667 aa24.09■■□□□ 1.45
SCAMP2-209ENST00000567638 PLXNC1O60486 1568 aa24.09■■□□□ 1.45
SCAMP2-209ENST00000567638 MROH2AA6NES4 1674 aa24.08■■□□□ 1.44
SCAMP2-209ENST00000567638 VPS8Q8N3P4 1428 aa24.06■■□□□ 1.44
SCAMP2-209ENST00000567638 NCOA2Q15596 1464 aa24.06■■□□□ 1.44
SCAMP2-209ENST00000567638 CNTLNQ9NXG0 1405 aa24.05■■□□□ 1.44
SCAMP2-209ENST00000567638 LOC105371045A0A1W2PR82 267 aa24.04■■□□□ 1.44
SCAMP2-209ENST00000567638 A2MP01023 1474 aa24.04■■□□□ 1.44
SCAMP2-209ENST00000567638 MBD5Q9P267 1494 aa24.04■■□□□ 1.44
SCAMP2-209ENST00000567638 ZNF644Q9H582 1327 aaPredicted RBP24.04■■□□□ 1.44
SCAMP2-209ENST00000567638 UHRF1BP1Q6BDS2 1440 aa24.03■■□□□ 1.44
SCAMP2-209ENST00000567638 ESF1Q9H501 851 aaKnown RBP24.03■■□□□ 1.44
SCAMP2-209ENST00000567638 CLTCQ00610 1675 aaKnown RBP24.01■■□□□ 1.43
SCAMP2-209ENST00000567638 STRCQ7RTU9 1775 aa24.01■■□□□ 1.43
SCAMP2-209ENST00000567638 CAMSAP2Q08AD1 1489 aa24■■□□□ 1.43
SCAMP2-209ENST00000567638 RTEL1-TNFRSF6BF6WH68 1400 aa23.97■■□□□ 1.43
SCAMP2-209ENST00000567638 LRRC9Q6ZRR7 1453 aa23.97■■□□□ 1.43
SCAMP2-209ENST00000567638 CCDC141Q6ZP82 1450 aa23.96■■□□□ 1.43
SCAMP2-209ENST00000567638 MAP3K1Q13233 1512 aa23.94■■□□□ 1.42
SCAMP2-209ENST00000567638 FBXO41Q8TF61 875 aa23.93■■□□□ 1.42
SCAMP2-209ENST00000567638 ARHGEF5Q12774 1597 aa23.93■■□□□ 1.42
SCAMP2-209ENST00000567638 NPATQ14207 1427 aa23.92■■□□□ 1.42
SCAMP2-209ENST00000567638 ZMYM3Q14202 1370 aa23.9■■□□□ 1.42
SCAMP2-209ENST00000567638 ZNF142P52746 1687 aaPredicted RBP23.87■■□□□ 1.41
SCAMP2-209ENST00000567638 DHX29Q7Z478 1369 aaKnown RBP23.87■■□□□ 1.41
SCAMP2-209ENST00000567638 MYO3AQ8NEV4 1616 aa23.87■■□□□ 1.41
SCAMP2-209ENST00000567638 RSPH4AQ5TD94 716 aa23.86■■□□□ 1.41
SCAMP2-209ENST00000567638 GGT6Q6P531 493 aa23.86■■□□□ 1.41
SCAMP2-209ENST00000567638 PPP6R1Q9UPN7 881 aa23.83■■□□□ 1.41
SCAMP2-209ENST00000567638 DMRT2Q9Y5R5 561 aa23.83■■□□□ 1.41
SCAMP2-209ENST00000567638 MAST1Q9Y2H9 1570 aa23.82■■□□□ 1.4
SCAMP2-209ENST00000567638 KANK4Q5T7N3 995 aaPredicted RBP23.82■■□□□ 1.4
SCAMP2-209ENST00000567638 PTPRKQ15262 1439 aa23.82■■□□□ 1.4
SCAMP2-209ENST00000567638 FAM135AQ9P2D6 1515 aa23.81■■□□□ 1.4
SCAMP2-209ENST00000567638 CAMSAP1Q5T5Y3 1602 aa23.81■■□□□ 1.4
SCAMP2-209ENST00000567638 NCOA1Q15788 1441 aa23.8■■□□□ 1.4
SCAMP2-209ENST00000567638 MYOM3Q5VTT5 1437 aa23.8■■□□□ 1.4
SCAMP2-209ENST00000567638 PTPRTO14522 1441 aa23.79■■□□□ 1.4
SCAMP2-209ENST00000567638 MIA2Q96PC5 1412 aa23.79■■□□□ 1.4
SCAMP2-209ENST00000567638 CEP170BQ9Y4F5 1589 aaPredicted RBP23.78■■□□□ 1.4
SCAMP2-209ENST00000567638 CERKQ8TCT0 537 aa23.78■■□□□ 1.4
SCAMP2-209ENST00000567638 KDM5DQ9BY66 1539 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms