RNA–Protein interactions for RNA: ENST00000566772.1

KARS-208, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 644 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-208ENST00000566772 KDM4CQ9H3R0 1056 aa10.75□□□□□ -0.69
KARS-208ENST00000566772 PODXL2Q9NZ53 605 aa10.73□□□□□ -0.69
KARS-208ENST00000566772 TRIM66O15016 1216 aa10.71□□□□□ -0.69
KARS-208ENST00000566772 EVX2Q03828 476 aa10.71□□□□□ -0.69
KARS-208ENST00000566772 PRKAR2AP13861 404 aaKnown RBP10.7□□□□□ -0.7
KARS-208ENST00000566772 RSPH6AQ9H0K4 717 aa10.7□□□□□ -0.7
KARS-208ENST00000566772 PDE4DQ08499 809 aa10.69□□□□□ -0.7
KARS-208ENST00000566772 PAK3O75914 559 aaPredicted RBP10.68□□□□□ -0.7
KARS-208ENST00000566772 FXR2P51116 673 aaKnown RBP eCLIP10.62□□□□□ -0.717e-7■■■□□ 16.9
KARS-208ENST00000566772 PPP1R15BQ5SWA1 713 aa10.62□□□□□ -0.71
KARS-208ENST00000566772 FAM117AQ9C073 453 aa10.61□□□□□ -0.71
KARS-208ENST00000566772 DPYSL4O14531 572 aa10.6□□□□□ -0.71
KARS-208ENST00000566772 GOLGA2Q08379 1002 aa10.6□□□□□ -0.71
KARS-208ENST00000566772 TRIM26Q12899 539 aaPredicted RBP10.6□□□□□ -0.71
KARS-208ENST00000566772 MKRN3Q13064 507 aaKnown RBP10.6□□□□□ -0.71
KARS-208ENST00000566772 ARID3AQ99856 593 aa10.6□□□□□ -0.71
KARS-208ENST00000566772 EMILIN3Q9NT22 766 aa10.59□□□□□ -0.71
KARS-208ENST00000566772 C1orf115Q9H7X2 142 aa10.58□□□□□ -0.72
KARS-208ENST00000566772 GPHNQ9NQX3 736 aaPredicted RBP10.58□□□□□ -0.72
KARS-208ENST00000566772 ZNF316A6NFI3 1004 aaPredicted RBP10.57□□□□□ -0.72
KARS-208ENST00000566772 TMEM106CQ9BVX2 250 aa10.57□□□□□ -0.72
KARS-208ENST00000566772 SPDYE16A6NNV3 312 aaPredicted RBP10.56□□□□□ -0.72
KARS-208ENST00000566772 GPR37O15354 613 aa10.56□□□□□ -0.72
KARS-208ENST00000566772 PCDH10Q9P2E7 1040 aa10.56□□□□□ -0.72
KARS-208ENST00000566772 PHF12Q96QT6 1004 aa10.55□□□□□ -0.72
KARS-208ENST00000566772 PLEKHG3A1L390 1219 aa10.54□□□□□ -0.72
KARS-208ENST00000566772 HRCP23327 699 aa10.54□□□□□ -0.72
KARS-208ENST00000566772 PDIA6Q15084 440 aa10.54□□□□□ -0.72
KARS-208ENST00000566772 POTEMA6NI47 508 aa10.53□□□□□ -0.72
KARS-208ENST00000566772 ZRANB1Q9UGI0 708 aa10.53□□□□□ -0.72
KARS-208ENST00000566772 MINK1Q8N4C8 1332 aaPredicted RBP10.52□□□□□ -0.73
KARS-208ENST00000566772 ARID3CA6NKF2 412 aa10.51□□□□□ -0.73
KARS-208ENST00000566772 DSG2Q14126 1118 aa10.51□□□□□ -0.73
KARS-208ENST00000566772 TRPC6Q9Y210 931 aa10.51□□□□□ -0.73
KARS-208ENST00000566772 GABBR2O75899 941 aa10.5□□□□□ -0.73
KARS-208ENST00000566772 CCDC102AQ96A19 550 aa10.49□□□□□ -0.73
KARS-208ENST00000566772 APBB1O00213 710 aa10.48□□□□□ -0.73
KARS-208ENST00000566772 DDRGK1Q96HY6 314 aa10.48□□□□□ -0.73
KARS-208ENST00000566772 NUTM2FA1L443 756 aa10.47□□□□□ -0.73
KARS-208ENST00000566772 IRF6O14896 467 aa10.47□□□□□ -0.73
KARS-208ENST00000566772 RANGAP1P46060 587 aaPredicted RBP10.46□□□□□ -0.73
KARS-208ENST00000566772 MAP2K5Q13163 448 aa10.46□□□□□ -0.73
KARS-208ENST00000566772 PARP9Q8IXQ6 854 aa10.46□□□□□ -0.73
KARS-208ENST00000566772 GRXCR2A6NFK2 248 aa10.45□□□□□ -0.74
KARS-208ENST00000566772 FLIIQ13045 1269 aa10.45□□□□□ -0.74
KARS-208ENST00000566772 AMHR2Q16671 573 aa10.45□□□□□ -0.74
KARS-208ENST00000566772 ILDR1Q86SU0 546 aaPredicted RBP10.45□□□□□ -0.74
KARS-208ENST00000566772 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.45□□□□□ -0.742e-12■■■■■ 28.2
KARS-208ENST00000566772 CD44P16070 742 aaKnown RBP10.44□□□□□ -0.74
KARS-208ENST00000566772 POTEGQ6S5H5 508 aa10.44□□□□□ -0.74
KARS-208ENST00000566772 FOXK1P85037 733 aa10.42□□□□□ -0.74
KARS-208ENST00000566772 DPY19L2Q6NUT2 758 aa10.42□□□□□ -0.74
KARS-208ENST00000566772 MS4A3Q96HJ5 214 aa10.42□□□□□ -0.74
KARS-208ENST00000566772 FECHP22830 423 aa10.41□□□□□ -0.74
KARS-208ENST00000566772 TMC2Q8TDI7 906 aa10.41□□□□□ -0.74
KARS-208ENST00000566772 GNPATO15228 680 aa10.4□□□□□ -0.74
KARS-208ENST00000566772 ONECUT3O60422 494 aaPredicted RBP10.39□□□□□ -0.75
KARS-208ENST00000566772 OSBPP22059 807 aa10.39□□□□□ -0.75
KARS-208ENST00000566772 PLPP6Q8IY26 295 aa10.39□□□□□ -0.75
KARS-208ENST00000566772 MICALL2Q8IY33 904 aa10.38□□□□□ -0.75
KARS-208ENST00000566772 MAP3K9P80192 1104 aa10.37□□□□□ -0.75
KARS-208ENST00000566772 GOPCQ9HD26 462 aa10.37□□□□□ -0.75
KARS-208ENST00000566772 TTLL13PA6NNM8 815 aa10.36□□□□□ -0.75
KARS-208ENST00000566772 CLUAP1Q96AJ1 413 aa10.36□□□□□ -0.75
KARS-208ENST00000566772 FCHSD2O94868 740 aa10.35□□□□□ -0.75
KARS-208ENST00000566772 TTLL12Q14166 644 aaPredicted RBP10.35□□□□□ -0.75
KARS-208ENST00000566772 HIC1Q14526 733 aa10.35□□□□□ -0.75
KARS-208ENST00000566772 A6NJR5 290 aa10.34□□□□□ -0.75
KARS-208ENST00000566772 TRAK2O60296 914 aa10.34□□□□□ -0.75
KARS-208ENST00000566772 TIE1P35590 1138 aa10.34□□□□□ -0.75
KARS-208ENST00000566772 NPM2Q86SE8 214 aaKnown RBP10.34□□□□□ -0.75
KARS-208ENST00000566772 C19orf67A6NJJ6 358 aa10.33□□□□□ -0.76
KARS-208ENST00000566772 C2orf72A6NCS6 295 aa10.32□□□□□ -0.76
KARS-208ENST00000566772 MS4A1P11836 297 aa10.32□□□□□ -0.76
KARS-208ENST00000566772 CCDC82Q8N4S0 544 aa10.32□□□□□ -0.76
KARS-208ENST00000566772 PCMTD1Q96MG8 357 aaPredicted RBP10.32□□□□□ -0.76
KARS-208ENST00000566772 PDIA4P13667 645 aaKnown RBP10.31□□□□□ -0.76
KARS-208ENST00000566772 GIGYF2Q6Y7W6 1299 aaKnown RBP10.31□□□□□ -0.76
KARS-208ENST00000566772 DDX12PQ92771 950 aa10.31□□□□□ -0.76
KARS-208ENST00000566772 PRIM1P49642 420 aaKnown RBP10.3□□□□□ -0.76
KARS-208ENST00000566772 UPF1Q92900 1129 aaKnown RBP eCLIP10.3□□□□□ -0.76
KARS-208ENST00000566772 REPIN1Q9BWE0 567 aaKnown RBP10.3□□□□□ -0.76
KARS-208ENST00000566772 BMP2KQ9NSY1 1161 aaPredicted RBP10.3□□□□□ -0.76
KARS-208ENST00000566772 KIF3CO14782 793 aa10.29□□□□□ -0.76
KARS-208ENST00000566772 PTGER2P43116 358 aa10.29□□□□□ -0.76
KARS-208ENST00000566772 TRIM35Q9UPQ4 493 aa10.29□□□□□ -0.76
KARS-208ENST00000566772 PDCD7Q8N8D1 485 aaKnown RBP10.27□□□□□ -0.77
KARS-208ENST00000566772 PTGDRQ13258 359 aa10.26□□□□□ -0.77
KARS-208ENST00000566772 ZBTB7CA1YPR0 619 aa10.25□□□□□ -0.77
KARS-208ENST00000566772 MCM6Q14566 821 aa10.25□□□□□ -0.77
KARS-208ENST00000566772 TMEM121BQ9BXQ6 578 aaPredicted RBP10.25□□□□□ -0.77
KARS-208ENST00000566772 OXER1Q8TDS5 423 aa10.24□□□□□ -0.77
KARS-208ENST00000566772 NECTIN2Q92692 538 aa10.24□□□□□ -0.77
KARS-208ENST00000566772 SH3D19Q5HYK7 790 aa10.23□□□□□ -0.77
KARS-208ENST00000566772 ZNF777Q9ULD5 760 aaPredicted RBP10.23□□□□□ -0.77
KARS-208ENST00000566772 BOLA1Q9Y3E2 137 aa10.23□□□□□ -0.77
KARS-208ENST00000566772 TMUB1Q9BVT8 246 aa10.21□□□□□ -0.77
KARS-208ENST00000566772 POTEIP0CG38 1075 aa10.2□□□□□ -0.78
KARS-208ENST00000566772 TBC1D12O60347 775 aa10.19□□□□□ -0.78
KARS-208ENST00000566772 EVI5O60447 810 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms