RNA–Protein interactions for RNA: ENST00000566547.1

GGA2-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 2

Gene GGA2, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-206ENST00000566547 ZFYVE16Q7Z3T8 1539 aa36.5■■■■□ 3.43
GGA2-206ENST00000566547 SIGLEC1Q9BZZ2 1709 aa36.5■■■■□ 3.43
GGA2-206ENST00000566547 PCF11O94913 1555 aaKnown RBP36.49■■■■□ 3.43
GGA2-206ENST00000566547 POGZQ7Z3K3 1410 aa36.47■■■■□ 3.43
GGA2-206ENST00000566547 EFCAB2Q5VUJ9 269 aa36.44■■■■□ 3.42
GGA2-206ENST00000566547 RIMS1Q86UR5 1692 aaKnown RBP36.44■■■■□ 3.42
GGA2-206ENST00000566547 CLIP1P30622 1438 aa36.42■■■■□ 3.42
GGA2-206ENST00000566547 CASKIN1Q8WXD9 1431 aa36.41■■■■□ 3.42
GGA2-206ENST00000566547 MAGI2Q86UL8 1455 aa36.4■■■■□ 3.42
GGA2-206ENST00000566547 ARHGAP5Q13017 1502 aa36.39■■■■□ 3.42
GGA2-206ENST00000566547 ILDR1Q86SU0 546 aaPredicted RBP36.37■■■■□ 3.41
GGA2-206ENST00000566547 MLECQ14165 292 aa36.34■■■■□ 3.41
GGA2-206ENST00000566547 PLPPR3Q6T4P5 718 aa36.34■■■■□ 3.41
GGA2-206ENST00000566547 CDC42BPBQ9Y5S2 1711 aa36.34■■■■□ 3.41
GGA2-206ENST00000566547 CCDC18Q5T9S5 1454 aa36.33■■■■□ 3.41
GGA2-206ENST00000566547 AFAP1Q8N556 730 aa36.28■■■■□ 3.4
GGA2-206ENST00000566547 ATP10AO60312 1499 aa36.26■■■■□ 3.4
GGA2-206ENST00000566547 FYCO1Q9BQS8 1478 aa36.26■■■■□ 3.4
GGA2-206ENST00000566547 ZNF518AQ6AHZ1 1483 aa36.25■■■■□ 3.39
GGA2-206ENST00000566547 PREX2Q70Z35 1606 aa36.25■■■■□ 3.39
GGA2-206ENST00000566547 FER1L4A9Z1Z3 1794 aa36.23■■■■□ 3.39
GGA2-206ENST00000566547 C9orf84Q5VXU9 1444 aa36.22■■■■□ 3.39
GGA2-206ENST00000566547 LMTK3Q96Q04 1460 aa36.22■■■■□ 3.39
GGA2-206ENST00000566547 KDM5CP41229 1560 aa36.22■■■■□ 3.39
GGA2-206ENST00000566547 MYT1LQ9UL68 1186 aa36.19■■■■□ 3.38
GGA2-206ENST00000566547 CDC42BPAQ5VT25 1732 aa36.19■■■■□ 3.38
GGA2-206ENST00000566547 ARHGEF12Q9NZN5 1544 aa36.17■■■■□ 3.38
GGA2-206ENST00000566547 ABCC1P33527 1531 aa36.15■■■■□ 3.38
GGA2-206ENST00000566547 TRAPPC8Q9Y2L5 1435 aa36.14■■■■□ 3.38
GGA2-206ENST00000566547 DIP2CQ9Y2E4 1556 aa36.13■■■■□ 3.37
GGA2-206ENST00000566547 ITSN2Q9NZM3 1697 aa36.13■■■■□ 3.37
GGA2-206ENST00000566547 ABCA6Q8N139 1617 aa36.11■■■■□ 3.37
GGA2-206ENST00000566547 HSPA2P54652 639 aa36.09■■■■□ 3.37
GGA2-206ENST00000566547 ZNF777Q9ULD5 760 aaPredicted RBP36.06■■■■□ 3.36
GGA2-206ENST00000566547 MLH3Q9UHC1 1453 aa36.05■■■■□ 3.36
GGA2-206ENST00000566547 CEBPAP49715 358 aaPredicted RBP36.02■■■■□ 3.36
GGA2-206ENST00000566547 SAMD9LQ8IVG5 1584 aa36.02■■■■□ 3.36
GGA2-206ENST00000566547 GPATCH8Q9UKJ3 1502 aaKnown RBP36.01■■■■□ 3.36
GGA2-206ENST00000566547 KIDINS220Q9ULH0 1771 aa35.99■■■■□ 3.35
GGA2-206ENST00000566547 REREQ9P2R6 1566 aa35.98■■■■□ 3.35
GGA2-206ENST00000566547 SYCP2Q9BX26 1530 aa35.96■■■■□ 3.35
GGA2-206ENST00000566547 CEP162Q5TB80 1403 aa35.93■■■■□ 3.34
GGA2-206ENST00000566547 MTUS2Q5JR59 1369 aa35.93■■■■□ 3.34
GGA2-206ENST00000566547 HNRNPMP52272 730 aaKnown RBP eCLIP35.93■■■■□ 3.34
GGA2-206ENST00000566547 CCNB3Q8WWL7 1395 aa35.89■■■■□ 3.34
GGA2-206ENST00000566547 PREX1Q8TCU6 1659 aa35.88■■■■□ 3.33
GGA2-206ENST00000566547 CFDP1Q9UEE9 299 aaPredicted RBP35.88■■■■□ 3.33
GGA2-206ENST00000566547 AGLP35573 1532 aa35.88■■■■□ 3.33
GGA2-206ENST00000566547 SPAG9O60271 1321 aaKnown RBP35.83■■■■□ 3.33
GGA2-206ENST00000566547 C3P01024 1663 aa35.81■■■■□ 3.32
GGA2-206ENST00000566547 TIAM1Q13009 1591 aa35.81■■■■□ 3.32
GGA2-206ENST00000566547 EHBP1L1Q8N3D4 1523 aa35.79■■■■□ 3.32
GGA2-206ENST00000566547 FBXO41Q8TF61 875 aa35.79■■■■□ 3.32
GGA2-206ENST00000566547 KIAA1107Q9UPP5 1409 aa35.78■■■■□ 3.32
GGA2-206ENST00000566547 ZNF644Q9H582 1327 aaPredicted RBP35.78■■■■□ 3.32
GGA2-206ENST00000566547 SUPT6HQ7KZ85 1726 aaKnown RBP35.77■■■■□ 3.32
GGA2-206ENST00000566547 ESF1Q9H501 851 aaKnown RBP35.77■■■■□ 3.32
GGA2-206ENST00000566547 PLEKHH2Q8IVE3 1493 aa35.77■■■■□ 3.32
GGA2-206ENST00000566547 ATP7AQ04656 1500 aa35.77■■■■□ 3.32
GGA2-206ENST00000566547 INO80Q9ULG1 1556 aaPredicted RBP35.74■■■■□ 3.31
GGA2-206ENST00000566547 LOC105371045A0A1W2PR82 267 aa35.73■■■■□ 3.31
GGA2-206ENST00000566547 SETD1BQ9UPS6 1966 aaKnown RBP35.73■■■■□ 3.31
GGA2-206ENST00000566547 UHRF1BP1Q6BDS2 1440 aa35.72■■■■□ 3.31
GGA2-206ENST00000566547 STRCQ7RTU9 1775 aa35.66■■■■□ 3.3
GGA2-206ENST00000566547 A2MP01023 1474 aa35.65■■■■□ 3.3
GGA2-206ENST00000566547 PLXNC1O60486 1568 aa35.64■■■■□ 3.3
GGA2-206ENST00000566547 CNTLNQ9NXG0 1405 aa35.64■■■■□ 3.3
GGA2-206ENST00000566547 MBD5Q9P267 1494 aa35.63■■■■□ 3.29
GGA2-206ENST00000566547 NCOA2Q15596 1464 aa35.6■■■■□ 3.29
GGA2-206ENST00000566547 MROH2AA6NES4 1674 aa35.59■■■■□ 3.29
GGA2-206ENST00000566547 CLTCQ00610 1675 aaKnown RBP35.59■■■■□ 3.29
GGA2-206ENST00000566547 ADGBQ8N7X0 1667 aa35.57■■■■□ 3.28
GGA2-206ENST00000566547 ZMYM3Q14202 1370 aa35.55■■■■□ 3.28
GGA2-206ENST00000566547 GGT6Q6P531 493 aa35.55■■■■□ 3.28
GGA2-206ENST00000566547 CERKQ8TCT0 537 aa35.53■■■■□ 3.28
GGA2-206ENST00000566547 VPS8Q8N3P4 1428 aa35.52■■■■□ 3.28
GGA2-206ENST00000566547 CAMSAP2Q08AD1 1489 aa35.52■■■■□ 3.28
GGA2-206ENST00000566547 DMRT2Q9Y5R5 561 aa35.47■■■■□ 3.27
GGA2-206ENST00000566547 RTEL1-TNFRSF6BF6WH68 1400 aa35.47■■■■□ 3.27
GGA2-206ENST00000566547 NPATQ14207 1427 aa35.46■■■■□ 3.27
GGA2-206ENST00000566547 CCDC141Q6ZP82 1450 aa35.46■■■■□ 3.27
GGA2-206ENST00000566547 LRRC9Q6ZRR7 1453 aa35.44■■■■□ 3.26
GGA2-206ENST00000566547 DHX29Q7Z478 1369 aaKnown RBP35.4■■■■□ 3.26
GGA2-206ENST00000566547 PTPRKQ15262 1439 aa35.39■■■■□ 3.26
GGA2-206ENST00000566547 NCOA1Q15788 1441 aa35.39■■■■□ 3.26
GGA2-206ENST00000566547 KANK4Q5T7N3 995 aaPredicted RBP35.38■■■■□ 3.25
GGA2-206ENST00000566547 CAMSAP1Q5T5Y3 1602 aa35.38■■■■□ 3.25
GGA2-206ENST00000566547 MYO3AQ8NEV4 1616 aa35.37■■■■□ 3.25
GGA2-206ENST00000566547 PTPRTO14522 1441 aa35.37■■■■□ 3.25
GGA2-206ENST00000566547 KIF3BO15066 747 aa35.34■■■■□ 3.25
GGA2-206ENST00000566547 ARHGEF5Q12774 1597 aa35.33■■■■□ 3.25
GGA2-206ENST00000566547 RSPH4AQ5TD94 716 aa35.31■■■■□ 3.24
GGA2-206ENST00000566547 PPP6R1Q9UPN7 881 aa35.31■■■■□ 3.24
GGA2-206ENST00000566547 ZNF142P52746 1687 aaPredicted RBP35.3■■■■□ 3.24
GGA2-206ENST00000566547 NCKAP5LQ9HCH0 1330 aa35.29■■■■□ 3.24
GGA2-206ENST00000566547 CEP170BQ9Y4F5 1589 aaPredicted RBP35.28■■■■□ 3.24
GGA2-206ENST00000566547 MAP3K1Q13233 1512 aa35.27■■■■□ 3.24
GGA2-206ENST00000566547 TSPY4P0CV99 314 aa35.26■■■■□ 3.24
GGA2-206ENST00000566547 TSPY10P0CW01 314 aa35.26■■■■□ 3.24
GGA2-206ENST00000566547 FBXO31Q5XUX0 539 aaPredicted RBP35.21■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms