RNA–Protein interactions for RNA: ENST00000566482.5

CNEP1R1-208, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CNEP1R1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-208ENST00000566482 EHBP1L1Q8N3D4 1523 aa20.45■□□□□ 0.86
CNEP1R1-208ENST00000566482 CDC42BPBQ9Y5S2 1711 aa20.44■□□□□ 0.86
CNEP1R1-208ENST00000566482 TIAM1Q13009 1591 aa20.44■□□□□ 0.86
CNEP1R1-208ENST00000566482 RICTORQ6R327 1708 aa20.44■□□□□ 0.86
CNEP1R1-208ENST00000566482 CDC42BPAQ5VT25 1732 aa20.43■□□□□ 0.86
CNEP1R1-208ENST00000566482 SCAPERQ9BY12 1400 aa20.43■□□□□ 0.86
CNEP1R1-208ENST00000566482 GPATCH8Q9UKJ3 1502 aaKnown RBP20.39■□□□□ 0.85
CNEP1R1-208ENST00000566482 POGZQ7Z3K3 1410 aa20.39■□□□□ 0.85
CNEP1R1-208ENST00000566482 ZMYM4Q5VZL5 1548 aa20.37■□□□□ 0.85
CNEP1R1-208ENST00000566482 CCNB3Q8WWL7 1395 aa20.37■□□□□ 0.85
CNEP1R1-208ENST00000566482 MAP3K1Q13233 1512 aa20.36■□□□□ 0.85
CNEP1R1-208ENST00000566482 ABCC1P33527 1531 aa20.35■□□□□ 0.85
CNEP1R1-208ENST00000566482 LRRC9Q6ZRR7 1453 aa20.35■□□□□ 0.85
CNEP1R1-208ENST00000566482 ARHGEF40Q8TER5 1519 aa20.34■□□□□ 0.85
CNEP1R1-208ENST00000566482 KDM4FA0A1W2PPD8 638 aa20.34■□□□□ 0.85
CNEP1R1-208ENST00000566482 SUPT6HQ7KZ85 1726 aaKnown RBP20.33■□□□□ 0.85
CNEP1R1-208ENST00000566482 NCOA2Q15596 1464 aa20.32■□□□□ 0.84
CNEP1R1-208ENST00000566482 ZNF518AQ6AHZ1 1483 aa20.32■□□□□ 0.84
CNEP1R1-208ENST00000566482 SAMD9LQ8IVG5 1584 aa20.32■□□□□ 0.84
CNEP1R1-208ENST00000566482 ARHGEF12Q9NZN5 1544 aa20.32■□□□□ 0.84
CNEP1R1-208ENST00000566482 CFDP1Q9UEE9 299 aaPredicted RBP20.31■□□□□ 0.84
CNEP1R1-208ENST00000566482 ZNF777Q9ULD5 760 aaPredicted RBP20.31■□□□□ 0.84
CNEP1R1-208ENST00000566482 ITSN2Q9NZM3 1697 aa20.31■□□□□ 0.84
CNEP1R1-208ENST00000566482 ZFYVE16Q7Z3T8 1539 aa20.31■□□□□ 0.84
CNEP1R1-208ENST00000566482 MAGI2Q86UL8 1455 aa20.3■□□□□ 0.84
CNEP1R1-208ENST00000566482 YEATS2Q9ULM3 1422 aa20.3■□□□□ 0.84
CNEP1R1-208ENST00000566482 KANK4Q5T7N3 995 aaPredicted RBP20.3■□□□□ 0.84
CNEP1R1-208ENST00000566482 KDM5CP41229 1560 aa20.29■□□□□ 0.84
CNEP1R1-208ENST00000566482 AFAP1Q8N556 730 aa20.29■□□□□ 0.84
CNEP1R1-208ENST00000566482 TRAPPC8Q9Y2L5 1435 aa20.28■□□□□ 0.84
CNEP1R1-208ENST00000566482 SYCP2Q9BX26 1530 aa20.27■□□□□ 0.84
CNEP1R1-208ENST00000566482 APLP2Q06481 763 aa20.27■□□□□ 0.84
CNEP1R1-208ENST00000566482 PLEKHH2Q8IVE3 1493 aa20.25■□□□□ 0.83
CNEP1R1-208ENST00000566482 HECW2Q9P2P5 1572 aa20.25■□□□□ 0.83
CNEP1R1-208ENST00000566482 KIAA1107Q9UPP5 1409 aa20.24■□□□□ 0.83
CNEP1R1-208ENST00000566482 HNRNPMP52272 730 aaKnown RBP eCLIP20.23■□□□□ 0.83
CNEP1R1-208ENST00000566482 ZNF644Q9H582 1327 aaPredicted RBP20.23■□□□□ 0.83
CNEP1R1-208ENST00000566482 MLH3Q9UHC1 1453 aa20.21■□□□□ 0.83
CNEP1R1-208ENST00000566482 ARID4BQ4LE39 1312 aaPredicted RBP20.21■□□□□ 0.83
CNEP1R1-208ENST00000566482 ATP10AO60312 1499 aa20.2■□□□□ 0.82
CNEP1R1-208ENST00000566482 MYT1LQ9UL68 1186 aa20.2■□□□□ 0.82
CNEP1R1-208ENST00000566482 SIGLEC1Q9BZZ2 1709 aa20.19■□□□□ 0.82
CNEP1R1-208ENST00000566482 C9orf84Q5VXU9 1444 aa20.19■□□□□ 0.82
CNEP1R1-208ENST00000566482 DIP2CQ9Y2E4 1556 aa20.18■□□□□ 0.82
CNEP1R1-208ENST00000566482 ABCA6Q8N139 1617 aa20.18■□□□□ 0.82
CNEP1R1-208ENST00000566482 BCORL1Q5H9F3 1711 aa20.18■□□□□ 0.82
CNEP1R1-208ENST00000566482 CAMSAP2Q08AD1 1489 aa20.18■□□□□ 0.82
CNEP1R1-208ENST00000566482 KIDINS220Q9ULH0 1771 aa20.16■□□□□ 0.82
CNEP1R1-208ENST00000566482 MYOM3Q5VTT5 1437 aa20.16■□□□□ 0.82
CNEP1R1-208ENST00000566482 MBD5Q9P267 1494 aa20.16■□□□□ 0.82
CNEP1R1-208ENST00000566482 SPAG9O60271 1321 aaKnown RBP20.15■□□□□ 0.82
CNEP1R1-208ENST00000566482 ADAMTSL3P82987 1691 aa20.15■□□□□ 0.82
CNEP1R1-208ENST00000566482 INO80Q9ULG1 1556 aaPredicted RBP20.12■□□□□ 0.81
CNEP1R1-208ENST00000566482 ATP7AQ04656 1500 aa20.12■□□□□ 0.81
CNEP1R1-208ENST00000566482 REREQ9P2R6 1566 aa20.12■□□□□ 0.81
CNEP1R1-208ENST00000566482 MIA2Q96PC5 1412 aa20.11■□□□□ 0.81
CNEP1R1-208ENST00000566482 MADDQ8WXG6 1647 aa20.1■□□□□ 0.81
CNEP1R1-208ENST00000566482 CCDC141Q6ZP82 1450 aa20.1■□□□□ 0.81
CNEP1R1-208ENST00000566482 ARHGEF5Q12774 1597 aa20.08■□□□□ 0.81
CNEP1R1-208ENST00000566482 MLECQ14165 292 aa20.08■□□□□ 0.81
CNEP1R1-208ENST00000566482 RSPH4AQ5TD94 716 aa20.05■□□□□ 0.8
CNEP1R1-208ENST00000566482 AGLP35573 1532 aa20.05■□□□□ 0.8
CNEP1R1-208ENST00000566482 PTPRMP28827 1452 aa20.05■□□□□ 0.8
CNEP1R1-208ENST00000566482 RTEL1-TNFRSF6BF6WH68 1400 aa20.04■□□□□ 0.8
CNEP1R1-208ENST00000566482 FGD6Q6ZV73 1430 aa20.04■□□□□ 0.8
CNEP1R1-208ENST00000566482 PTPN23Q9H3S7 1636 aa20.04■□□□□ 0.8
CNEP1R1-208ENST00000566482 RIMS1Q86UR5 1692 aaKnown RBP20.03■□□□□ 0.8
CNEP1R1-208ENST00000566482 A2MP01023 1474 aa20.02■□□□□ 0.8
CNEP1R1-208ENST00000566482 FER1L4A9Z1Z3 1794 aa20.01■□□□□ 0.79
CNEP1R1-208ENST00000566482 PLXNC1O60486 1568 aa20.01■□□□□ 0.79
CNEP1R1-208ENST00000566482 ADGBQ8N7X0 1667 aa20■□□□□ 0.79
CNEP1R1-208ENST00000566482 TCOF1Q13428 1488 aaKnown RBP19.99■□□□□ 0.79
CNEP1R1-208ENST00000566482 TSPY4P0CV99 314 aa19.99■□□□□ 0.79
CNEP1R1-208ENST00000566482 TSPY10P0CW01 314 aa19.99■□□□□ 0.79
CNEP1R1-208ENST00000566482 MAST1Q9Y2H9 1570 aa19.97■□□□□ 0.79
CNEP1R1-208ENST00000566482 PPARGC1BQ86YN6 1023 aaKnown RBP19.96■□□□□ 0.79
CNEP1R1-208ENST00000566482 DHX29Q7Z478 1369 aaKnown RBP19.95■□□□□ 0.78
CNEP1R1-208ENST00000566482 ABCC5O15440 1437 aa19.94■□□□□ 0.78
CNEP1R1-208ENST00000566482 CROCC2H7BZ55 1655 aa19.94■□□□□ 0.78
CNEP1R1-208ENST00000566482 DNMT1P26358 1616 aaKnown RBP19.93■□□□□ 0.78
CNEP1R1-208ENST00000566482 DAPK1P53355 1430 aa19.92■□□□□ 0.78
CNEP1R1-208ENST00000566482 SHANK2Q9UPX8 1470 aa19.92■□□□□ 0.78
CNEP1R1-208ENST00000566482 PLPPR3Q6T4P5 718 aa19.91■□□□□ 0.78
CNEP1R1-208ENST00000566482 FAM50AQ14320 339 aaKnown RBP19.89■□□□□ 0.77
CNEP1R1-208ENST00000566482 ESF1Q9H501 851 aaKnown RBP19.89■□□□□ 0.77
CNEP1R1-208ENST00000566482 CNTLNQ9NXG0 1405 aa19.87■□□□□ 0.77
CNEP1R1-208ENST00000566482 GGT6Q6P531 493 aa19.87■□□□□ 0.77
CNEP1R1-208ENST00000566482 KIF3BO15066 747 aa19.86■□□□□ 0.77
CNEP1R1-208ENST00000566482 CEBPAP49715 358 aaPredicted RBP19.86■□□□□ 0.77
CNEP1R1-208ENST00000566482 C3P01024 1663 aa19.84■□□□□ 0.77
CNEP1R1-208ENST00000566482 KIF15Q9NS87 1388 aa19.83■□□□□ 0.77
CNEP1R1-208ENST00000566482 DUOX2Q9NRD8 1548 aa19.83■□□□□ 0.77
CNEP1R1-208ENST00000566482 CHIC2Q9UKJ5 165 aa19.83■□□□□ 0.77
CNEP1R1-208ENST00000566482 MROH2AA6NES4 1674 aa19.83■□□□□ 0.76
CNEP1R1-208ENST00000566482 CLTCQ00610 1675 aaKnown RBP19.82■□□□□ 0.76
CNEP1R1-208ENST00000566482 RRP7BPQ9NSQ0 103 aa19.82■□□□□ 0.76
CNEP1R1-208ENST00000566482 PPP6R1Q9UPN7 881 aa19.81■□□□□ 0.76
CNEP1R1-208ENST00000566482 EIF2AK4Q9P2K8 1649 aaKnown RBP19.8■□□□□ 0.76
CNEP1R1-208ENST00000566482 ANKRD30AQ9BXX3 1397 aa19.8■□□□□ 0.76
CNEP1R1-208ENST00000566482 LMTK3Q96Q04 1460 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms