RNA–Protein interactions for RNA: ENST00000566398.1

CPNE7-208, Transcript of copine 7, humanhuman

TSL 3

Gene CPNE7, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-208ENST00000566398 RICTORQ6R327 1708 aa30.42■■■□□ 2.46
CPNE7-208ENST00000566398 ZMYM4Q5VZL5 1548 aa30.4■■■□□ 2.46
CPNE7-208ENST00000566398 ARHGEF40Q8TER5 1519 aa30.4■■■□□ 2.46
CPNE7-208ENST00000566398 MAGI2Q86UL8 1455 aa30.35■■■□□ 2.45
CPNE7-208ENST00000566398 MTUS2Q5JR59 1369 aa30.34■■■□□ 2.45
CPNE7-208ENST00000566398 ZFYVE16Q7Z3T8 1539 aa30.33■■■□□ 2.45
CPNE7-208ENST00000566398 PREX2Q70Z35 1606 aa30.32■■■□□ 2.44
CPNE7-208ENST00000566398 ARID4BQ4LE39 1312 aaPredicted RBP30.31■■■□□ 2.44
CPNE7-208ENST00000566398 YEATS2Q9ULM3 1422 aa30.3■■■□□ 2.44
CPNE7-208ENST00000566398 ZNF518AQ6AHZ1 1483 aa30.3■■■□□ 2.44
CPNE7-208ENST00000566398 CDC42BPBQ9Y5S2 1711 aa30.25■■■□□ 2.43
CPNE7-208ENST00000566398 ABCC1P33527 1531 aa30.24■■■□□ 2.43
CPNE7-208ENST00000566398 EHBP1L1Q8N3D4 1523 aa30.24■■■□□ 2.43
CPNE7-208ENST00000566398 VPS8Q8N3P4 1428 aa30.23■■■□□ 2.43
CPNE7-208ENST00000566398 GPATCH8Q9UKJ3 1502 aaKnown RBP30.23■■■□□ 2.43
CPNE7-208ENST00000566398 AFAP1Q8N556 730 aa30.22■■■□□ 2.43
CPNE7-208ENST00000566398 CCNB3Q8WWL7 1395 aa30.22■■■□□ 2.43
CPNE7-208ENST00000566398 KDM5CP41229 1560 aa30.2■■■□□ 2.43
CPNE7-208ENST00000566398 CDC42BPAQ5VT25 1732 aa30.19■■■□□ 2.42
CPNE7-208ENST00000566398 ZNF777Q9ULD5 760 aaPredicted RBP30.18■■■□□ 2.42
CPNE7-208ENST00000566398 ADAMTSL3P82987 1691 aa30.17■■■□□ 2.42
CPNE7-208ENST00000566398 ARHGEF12Q9NZN5 1544 aa30.17■■■□□ 2.42
CPNE7-208ENST00000566398 BCORL1Q5H9F3 1711 aa30.16■■■□□ 2.42
CPNE7-208ENST00000566398 TRAPPC8Q9Y2L5 1435 aa30.16■■■□□ 2.42
CPNE7-208ENST00000566398 CFDP1Q9UEE9 299 aaPredicted RBP30.16■■■□□ 2.42
CPNE7-208ENST00000566398 MYT1LQ9UL68 1186 aa30.16■■■□□ 2.42
CPNE7-208ENST00000566398 ATP10AO60312 1499 aa30.16■■■□□ 2.42
CPNE7-208ENST00000566398 C9orf84Q5VXU9 1444 aa30.15■■■□□ 2.42
CPNE7-208ENST00000566398 HECW2Q9P2P5 1572 aa30.13■■■□□ 2.41
CPNE7-208ENST00000566398 PTPRMP28827 1452 aa30.12■■■□□ 2.41
CPNE7-208ENST00000566398 MLH3Q9UHC1 1453 aa30.12■■■□□ 2.41
CPNE7-208ENST00000566398 SAMD9LQ8IVG5 1584 aa30.11■■■□□ 2.41
CPNE7-208ENST00000566398 ITSN2Q9NZM3 1697 aa30.11■■■□□ 2.41
CPNE7-208ENST00000566398 TIAM1Q13009 1591 aa30.11■■■□□ 2.41
CPNE7-208ENST00000566398 PLEKHH2Q8IVE3 1493 aa30.1■■■□□ 2.41
CPNE7-208ENST00000566398 MADDQ8WXG6 1647 aa30.09■■■□□ 2.41
CPNE7-208ENST00000566398 SYCP2Q9BX26 1530 aa30.09■■■□□ 2.41
CPNE7-208ENST00000566398 KIAA1107Q9UPP5 1409 aa30.07■■■□□ 2.4
CPNE7-208ENST00000566398 SIGLEC1Q9BZZ2 1709 aa30.06■■■□□ 2.4
CPNE7-208ENST00000566398 DIP2CQ9Y2E4 1556 aa30.05■■■□□ 2.4
CPNE7-208ENST00000566398 NCOA2Q15596 1464 aa30.05■■■□□ 2.4
CPNE7-208ENST00000566398 HNRNPMP52272 730 aaKnown RBP eCLIP30.04■■■□□ 2.4
CPNE7-208ENST00000566398 MLECQ14165 292 aa30.04■■■□□ 2.4
CPNE7-208ENST00000566398 LRRC9Q6ZRR7 1453 aa30.01■■■□□ 2.4
CPNE7-208ENST00000566398 ABCA6Q8N139 1617 aa30.01■■■□□ 2.39
CPNE7-208ENST00000566398 SUPT6HQ7KZ85 1726 aaKnown RBP30■■■□□ 2.39
CPNE7-208ENST00000566398 SPAG9O60271 1321 aaKnown RBP29.99■■■□□ 2.39
CPNE7-208ENST00000566398 REREQ9P2R6 1566 aa29.99■■■□□ 2.39
CPNE7-208ENST00000566398 MAP3K1Q13233 1512 aa29.99■■■□□ 2.39
CPNE7-208ENST00000566398 RIMS1Q86UR5 1692 aaKnown RBP29.97■■■□□ 2.39
CPNE7-208ENST00000566398 ZNF644Q9H582 1327 aaPredicted RBP29.96■■■□□ 2.39
CPNE7-208ENST00000566398 KIDINS220Q9ULH0 1771 aa29.93■■■□□ 2.38
CPNE7-208ENST00000566398 KANK4Q5T7N3 995 aaPredicted RBP29.91■■■□□ 2.38
CPNE7-208ENST00000566398 AGLP35573 1532 aa29.91■■■□□ 2.38
CPNE7-208ENST00000566398 ATP7AQ04656 1500 aa29.91■■■□□ 2.38
CPNE7-208ENST00000566398 MBD5Q9P267 1494 aa29.9■■■□□ 2.38
CPNE7-208ENST00000566398 APLP2Q06481 763 aa29.88■■■□□ 2.37
CPNE7-208ENST00000566398 PLPPR3Q6T4P5 718 aa29.88■■■□□ 2.37
CPNE7-208ENST00000566398 CAMSAP2Q08AD1 1489 aa29.87■■■□□ 2.37
CPNE7-208ENST00000566398 INO80Q9ULG1 1556 aaPredicted RBP29.87■■■□□ 2.37
CPNE7-208ENST00000566398 FER1L4A9Z1Z3 1794 aa29.87■■■□□ 2.37
CPNE7-208ENST00000566398 CCDC141Q6ZP82 1450 aa29.82■■■□□ 2.36
CPNE7-208ENST00000566398 A2MP01023 1474 aa29.8■■■□□ 2.36
CPNE7-208ENST00000566398 RTEL1-TNFRSF6BF6WH68 1400 aa29.79■■■□□ 2.36
CPNE7-208ENST00000566398 RSPH4AQ5TD94 716 aa29.78■■■□□ 2.36
CPNE7-208ENST00000566398 ESF1Q9H501 851 aaKnown RBP29.78■■■□□ 2.36
CPNE7-208ENST00000566398 LMTK3Q96Q04 1460 aa29.77■■■□□ 2.36
CPNE7-208ENST00000566398 MYOM3Q5VTT5 1437 aa29.77■■■□□ 2.36
CPNE7-208ENST00000566398 PLXNC1O60486 1568 aa29.76■■■□□ 2.35
CPNE7-208ENST00000566398 MIA2Q96PC5 1412 aa29.74■■■□□ 2.35
CPNE7-208ENST00000566398 CEBPAP49715 358 aaPredicted RBP29.72■■■□□ 2.35
CPNE7-208ENST00000566398 ARHGEF5Q12774 1597 aa29.72■■■□□ 2.35
CPNE7-208ENST00000566398 CNTLNQ9NXG0 1405 aa29.71■■■□□ 2.35
CPNE7-208ENST00000566398 TSPY4P0CV99 314 aa29.68■■■□□ 2.34
CPNE7-208ENST00000566398 TSPY10P0CW01 314 aa29.68■■■□□ 2.34
CPNE7-208ENST00000566398 ADGBQ8N7X0 1667 aa29.68■■■□□ 2.34
CPNE7-208ENST00000566398 DHX29Q7Z478 1369 aaKnown RBP29.65■■■□□ 2.34
CPNE7-208ENST00000566398 GGT6Q6P531 493 aa29.63■■■□□ 2.33
CPNE7-208ENST00000566398 HSPA2P54652 639 aa29.61■■■□□ 2.33
CPNE7-208ENST00000566398 C3P01024 1663 aa29.57■■■□□ 2.32
CPNE7-208ENST00000566398 UHRF1BP1Q6BDS2 1440 aa29.57■■■□□ 2.32
CPNE7-208ENST00000566398 PPP6R1Q9UPN7 881 aa29.57■■■□□ 2.32
CPNE7-208ENST00000566398 MAST1Q9Y2H9 1570 aa29.56■■■□□ 2.32
CPNE7-208ENST00000566398 FGD6Q6ZV73 1430 aa29.56■■■□□ 2.32
CPNE7-208ENST00000566398 PREX1Q8TCU6 1659 aa29.56■■■□□ 2.32
CPNE7-208ENST00000566398 ZMYM3Q14202 1370 aa29.55■■■□□ 2.32
CPNE7-208ENST00000566398 KIF3BO15066 747 aa29.54■■■□□ 2.32
CPNE7-208ENST00000566398 MROH2AA6NES4 1674 aa29.53■■■□□ 2.32
CPNE7-208ENST00000566398 PTPN23Q9H3S7 1636 aa29.53■■■□□ 2.32
CPNE7-208ENST00000566398 NPATQ14207 1427 aa29.52■■■□□ 2.32
CPNE7-208ENST00000566398 TCOF1Q13428 1488 aaKnown RBP29.49■■■□□ 2.31
CPNE7-208ENST00000566398 CLTCQ00610 1675 aaKnown RBP29.49■■■□□ 2.31
CPNE7-208ENST00000566398 SHANK2Q9UPX8 1470 aa29.48■■■□□ 2.31
CPNE7-208ENST00000566398 ABCC5O15440 1437 aa29.48■■■□□ 2.31
CPNE7-208ENST00000566398 FAM135AQ9P2D6 1515 aa29.45■■■□□ 2.3
CPNE7-208ENST00000566398 DAPK1P53355 1430 aa29.45■■■□□ 2.3
CPNE7-208ENST00000566398 KDM5DQ9BY66 1539 aa29.43■■■□□ 2.3
CPNE7-208ENST00000566398 PTPRKQ15262 1439 aa29.42■■■□□ 2.3
CPNE7-208ENST00000566398 KIF15Q9NS87 1388 aa29.4■■■□□ 2.3
CPNE7-208ENST00000566398 WASHC2CQ9Y4E1 1318 aa29.4■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms