RNA–Protein interactions for RNA: ENST00000566239.1

HACD3-208, Transcript of 3-hydroxyacyl-CoA dehydratase 3, humanhuman

TSL 2

Gene HACD3, Length 393 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3-208ENST00000566239 MAGI2Q86UL8 1455 aa21.77■■□□□ 1.07
HACD3-208ENST00000566239 PTPRMP28827 1452 aa21.76■■□□□ 1.07
HACD3-208ENST00000566239 CCDC18Q5T9S5 1454 aa21.76■■□□□ 1.07
HACD3-208ENST00000566239 CASKIN1Q8WXD9 1431 aa21.74■■□□□ 1.07
HACD3-208ENST00000566239 SCAPERQ9BY12 1400 aa21.74■■□□□ 1.07
HACD3-208ENST00000566239 EFCAB2Q5VUJ9 269 aa21.74■■□□□ 1.07
HACD3-208ENST00000566239 POGZQ7Z3K3 1410 aa21.73■■□□□ 1.07
HACD3-208ENST00000566239 RIMS1Q86UR5 1692 aaKnown RBP21.73■■□□□ 1.07
HACD3-208ENST00000566239 CDC42BPBQ9Y5S2 1711 aa21.73■■□□□ 1.07
HACD3-208ENST00000566239 ARHGAP5Q13017 1502 aa21.73■■□□□ 1.07
HACD3-208ENST00000566239 FYCO1Q9BQS8 1478 aa21.7■■□□□ 1.06
HACD3-208ENST00000566239 PREX2Q70Z35 1606 aa21.69■■□□□ 1.06
HACD3-208ENST00000566239 SIGLEC1Q9BZZ2 1709 aa21.69■■□□□ 1.06
HACD3-208ENST00000566239 YEATS2Q9ULM3 1422 aa21.69■■□□□ 1.06
HACD3-208ENST00000566239 FER1L4A9Z1Z3 1794 aa21.67■■□□□ 1.06
HACD3-208ENST00000566239 ZNF518AQ6AHZ1 1483 aa21.66■■□□□ 1.06
HACD3-208ENST00000566239 CDC42BPAQ5VT25 1732 aa21.66■■□□□ 1.06
HACD3-208ENST00000566239 KDM5CP41229 1560 aa21.63■■□□□ 1.05
HACD3-208ENST00000566239 ATP10AO60312 1499 aa21.62■■□□□ 1.05
HACD3-208ENST00000566239 ITSN2Q9NZM3 1697 aa21.62■■□□□ 1.05
HACD3-208ENST00000566239 C9orf84Q5VXU9 1444 aa21.61■■□□□ 1.05
HACD3-208ENST00000566239 ABCC1P33527 1531 aa21.58■■□□□ 1.04
HACD3-208ENST00000566239 MYT1LQ9UL68 1186 aa21.56■■□□□ 1.04
HACD3-208ENST00000566239 MLECQ14165 292 aa21.55■■□□□ 1.04
HACD3-208ENST00000566239 AFAP1Q8N556 730 aa21.55■■□□□ 1.04
HACD3-208ENST00000566239 DIP2CQ9Y2E4 1556 aa21.55■■□□□ 1.04
HACD3-208ENST00000566239 ABCA6Q8N139 1617 aa21.54■■□□□ 1.04
HACD3-208ENST00000566239 ARHGEF12Q9NZN5 1544 aa21.54■■□□□ 1.04
HACD3-208ENST00000566239 REREQ9P2R6 1566 aa21.53■■□□□ 1.04
HACD3-208ENST00000566239 LMTK3Q96Q04 1460 aa21.52■■□□□ 1.04
HACD3-208ENST00000566239 MLH3Q9UHC1 1453 aa21.52■■□□□ 1.04
HACD3-208ENST00000566239 PLPPR3Q6T4P5 718 aa21.5■■□□□ 1.03
HACD3-208ENST00000566239 SAMD9LQ8IVG5 1584 aa21.49■■□□□ 1.03
HACD3-208ENST00000566239 KIDINS220Q9ULH0 1771 aa21.49■■□□□ 1.03
HACD3-208ENST00000566239 TRAPPC8Q9Y2L5 1435 aa21.48■■□□□ 1.03
HACD3-208ENST00000566239 ILDR1Q86SU0 546 aaPredicted RBP21.48■■□□□ 1.03
HACD3-208ENST00000566239 GPATCH8Q9UKJ3 1502 aaKnown RBP21.47■■□□□ 1.03
HACD3-208ENST00000566239 PREX1Q8TCU6 1659 aa21.47■■□□□ 1.03
HACD3-208ENST00000566239 MTUS2Q5JR59 1369 aa21.46■■□□□ 1.03
HACD3-208ENST00000566239 CEP162Q5TB80 1403 aa21.46■■□□□ 1.03
HACD3-208ENST00000566239 ZNF777Q9ULD5 760 aaPredicted RBP21.45■■□□□ 1.02
HACD3-208ENST00000566239 SYCP2Q9BX26 1530 aa21.45■■□□□ 1.02
HACD3-208ENST00000566239 CCNB3Q8WWL7 1395 aa21.43■■□□□ 1.02
HACD3-208ENST00000566239 AGLP35573 1532 aa21.43■■□□□ 1.02
HACD3-208ENST00000566239 EHBP1L1Q8N3D4 1523 aa21.43■■□□□ 1.02
HACD3-208ENST00000566239 PLEKHH2Q8IVE3 1493 aa21.42■■□□□ 1.02
HACD3-208ENST00000566239 SETD1BQ9UPS6 1966 aaKnown RBP21.41■■□□□ 1.02
HACD3-208ENST00000566239 CFDP1Q9UEE9 299 aaPredicted RBP21.39■■□□□ 1.01
HACD3-208ENST00000566239 C3P01024 1663 aa21.39■■□□□ 1.01
HACD3-208ENST00000566239 SUPT6HQ7KZ85 1726 aaKnown RBP21.38■■□□□ 1.01
HACD3-208ENST00000566239 TIAM1Q13009 1591 aa21.38■■□□□ 1.01
HACD3-208ENST00000566239 KIAA1107Q9UPP5 1409 aa21.38■■□□□ 1.01
HACD3-208ENST00000566239 ATP7AQ04656 1500 aa21.37■■□□□ 1.01
HACD3-208ENST00000566239 INO80Q9ULG1 1556 aaPredicted RBP21.36■■□□□ 1.01
HACD3-208ENST00000566239 HSPA2P54652 639 aa21.36■■□□□ 1.01
HACD3-208ENST00000566239 ESF1Q9H501 851 aaKnown RBP21.36■■□□□ 1.01
HACD3-208ENST00000566239 SPAG9O60271 1321 aaKnown RBP21.35■■□□□ 1.01
HACD3-208ENST00000566239 HNRNPMP52272 730 aaKnown RBP eCLIP21.35■■□□□ 1.012e-8■■■■□ 26.1
HACD3-208ENST00000566239 CEBPAP49715 358 aaPredicted RBP21.34■■□□□ 1.01
HACD3-208ENST00000566239 ADGBQ8N7X0 1667 aa21.34■■□□□ 1.01
HACD3-208ENST00000566239 MROH2AA6NES4 1674 aa21.33■■□□□ 1
HACD3-208ENST00000566239 CNTLNQ9NXG0 1405 aa21.3■■□□□ 1
HACD3-208ENST00000566239 UHRF1BP1Q6BDS2 1440 aa21.29■■□□□ 1
HACD3-208ENST00000566239 PLXNC1O60486 1568 aa21.28■■□□□ 1
HACD3-208ENST00000566239 A2MP01023 1474 aa21.26■□□□□ 0.99
HACD3-208ENST00000566239 CLTCQ00610 1675 aaKnown RBP21.26■□□□□ 0.99
HACD3-208ENST00000566239 FBXO41Q8TF61 875 aa21.25■□□□□ 0.99
HACD3-208ENST00000566239 STRCQ7RTU9 1775 aa21.25■□□□□ 0.99
HACD3-208ENST00000566239 NCOA2Q15596 1464 aa21.25■□□□□ 0.99
HACD3-208ENST00000566239 VPS8Q8N3P4 1428 aa21.24■□□□□ 0.99
HACD3-208ENST00000566239 MBD5Q9P267 1494 aa21.23■□□□□ 0.99
HACD3-208ENST00000566239 ZNF644Q9H582 1327 aaPredicted RBP21.23■□□□□ 0.99
HACD3-208ENST00000566239 LOC105371045A0A1W2PR82 267 aa21.21■□□□□ 0.99
HACD3-208ENST00000566239 CAMSAP2Q08AD1 1489 aa21.2■□□□□ 0.98
HACD3-208ENST00000566239 RTEL1-TNFRSF6BF6WH68 1400 aa21.2■□□□□ 0.98
HACD3-208ENST00000566239 DMRT2Q9Y5R5 561 aa21.18■□□□□ 0.98
HACD3-208ENST00000566239 CCDC141Q6ZP82 1450 aa21.18■□□□□ 0.98
HACD3-208ENST00000566239 NPATQ14207 1427 aa21.17■□□□□ 0.98
HACD3-208ENST00000566239 LRRC9Q6ZRR7 1453 aa21.17■□□□□ 0.98
HACD3-208ENST00000566239 ZMYM3Q14202 1370 aa21.16■□□□□ 0.98
HACD3-208ENST00000566239 RSPH4AQ5TD94 716 aa21.16■□□□□ 0.98
HACD3-208ENST00000566239 ARHGEF5Q12774 1597 aa21.15■□□□□ 0.98
HACD3-208ENST00000566239 MAP3K1Q13233 1512 aa21.15■□□□□ 0.98
HACD3-208ENST00000566239 GGT6Q6P531 493 aa21.15■□□□□ 0.98
HACD3-208ENST00000566239 PPP6R1Q9UPN7 881 aa21.13■□□□□ 0.97
HACD3-208ENST00000566239 ZNF142P52746 1687 aaPredicted RBP21.12■□□□□ 0.97
HACD3-208ENST00000566239 MYO3AQ8NEV4 1616 aa21.12■□□□□ 0.97
HACD3-208ENST00000566239 DHX29Q7Z478 1369 aaKnown RBP21.11■□□□□ 0.97
HACD3-208ENST00000566239 CERKQ8TCT0 537 aa21.09■□□□□ 0.97
HACD3-208ENST00000566239 PTPRTO14522 1441 aa21.08■□□□□ 0.97
HACD3-208ENST00000566239 CAMSAP1Q5T5Y3 1602 aa21.07■□□□□ 0.96
HACD3-208ENST00000566239 FAM135AQ9P2D6 1515 aa21.07■□□□□ 0.96
HACD3-208ENST00000566239 PTPRKQ15262 1439 aa21.06■□□□□ 0.96
HACD3-208ENST00000566239 TSPY4P0CV99 314 aa21.06■□□□□ 0.96
HACD3-208ENST00000566239 TSPY10P0CW01 314 aa21.06■□□□□ 0.96
HACD3-208ENST00000566239 CEP170BQ9Y4F5 1589 aaPredicted RBP21.06■□□□□ 0.96
HACD3-208ENST00000566239 NCOA1Q15788 1441 aa21.05■□□□□ 0.96
HACD3-208ENST00000566239 MAST1Q9Y2H9 1570 aa21.05■□□□□ 0.96
HACD3-208ENST00000566239 KIF3BO15066 747 aa21.04■□□□□ 0.96
HACD3-208ENST00000566239 KDM5DQ9BY66 1539 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms