RNA–Protein interactions for RNA: ENST00000566228.5

SNX29-205, Transcript of sorting nexin 29, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNX29, Length 8,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-205ENST00000566228 TAOK2Q9UL54 1235 aa13.38□□□□□ -0.27
SNX29-205ENST00000566228 NOP58Q9Y2X3 529 aaKnown RBP13.38□□□□□ -0.27
SNX29-205ENST00000566228 RTF1Q92541 710 aaKnown RBP13.38□□□□□ -0.27
SNX29-205ENST00000566228 TCEAL9Q9UHQ7 104 aa13.38□□□□□ -0.27
SNX29-205ENST00000566228 ZRSR2Q15696 482 aaKnown RBP13.38□□□□□ -0.27
SNX29-205ENST00000566228 LRRFIP1Q32MZ4 808 aaKnown RBP13.38□□□□□ -0.27
SNX29-205ENST00000566228 POGKQ9P215 609 aa13.37□□□□□ -0.27
SNX29-205ENST00000566228 LAS1LQ9Y4W2 734 aaKnown RBP13.37□□□□□ -0.27
SNX29-205ENST00000566228 NOM1Q5C9Z4 860 aaKnown RBP13.37□□□□□ -0.27
SNX29-205ENST00000566228 TEX35Q5T0J7 233 aa13.36□□□□□ -0.27
SNX29-205ENST00000566228 DCTN1Q14203 1278 aa13.35□□□□□ -0.27
SNX29-205ENST00000566228 ANKRD20A12PQ8NF67 263 aa13.35□□□□□ -0.27
SNX29-205ENST00000566228 MARCH6O60337 910 aa13.34□□□□□ -0.27
SNX29-205ENST00000566228 CHMP7Q8WUX9 453 aaPredicted RBP13.34□□□□□ -0.27
SNX29-205ENST00000566228 MYO6Q9UM54 1294 aa13.34□□□□□ -0.27
SNX29-205ENST00000566228 TPD52L1Q16890 204 aaPredicted RBP13.33□□□□□ -0.27
SNX29-205ENST00000566228 LMOD2Q6P5Q4 547 aa13.33□□□□□ -0.27
SNX29-205ENST00000566228 CCDC47Q96A33 483 aaKnown RBP13.33□□□□□ -0.28
SNX29-205ENST00000566228 GORABQ5T7V8 394 aa13.33□□□□□ -0.28
SNX29-205ENST00000566228 CCDC191Q8NCU4 936 aa13.33□□□□□ -0.28
SNX29-205ENST00000566228 HOOK1Q9UJC3 728 aaKnown RBP13.33□□□□□ -0.28
SNX29-205ENST00000566228 ATP6V1DQ9Y5K8 247 aa13.33□□□□□ -0.28
SNX29-205ENST00000566228 AMER1Q5JTC6 1135 aaPredicted RBP13.32□□□□□ -0.28
SNX29-205ENST00000566228 ACBD3Q9H3P7 528 aa13.32□□□□□ -0.28
SNX29-205ENST00000566228 PPP4R2Q9NY27 417 aa13.32□□□□□ -0.28
SNX29-205ENST00000566228 NEXNQ0ZGT2 675 aa13.31□□□□□ -0.28
SNX29-205ENST00000566228 KANK1Q14678 1352 aa13.31□□□□□ -0.28
SNX29-205ENST00000566228 AK7Q96M32 723 aa13.3□□□□□ -0.28
SNX29-205ENST00000566228 AMOTL1Q8IY63 956 aa13.3□□□□□ -0.28
SNX29-205ENST00000566228 TCERG1O14776 1098 aaKnown RBP13.29□□□□□ -0.28
SNX29-205ENST00000566228 CAGE1Q8TC20 777 aa13.29□□□□□ -0.28
SNX29-205ENST00000566228 TAF7LQ5H9L4 462 aa13.29□□□□□ -0.28
SNX29-205ENST00000566228 SPAG9O60271 1321 aaKnown RBP13.28□□□□□ -0.28
SNX29-205ENST00000566228 CCDC173Q0VFZ6 552 aa13.28□□□□□ -0.28
SNX29-205ENST00000566228 ODF2Q5BJF6 829 aa13.28□□□□□ -0.28
SNX29-205ENST00000566228 GOLGA6L19H0YKK7 550 aa13.27□□□□□ -0.29
SNX29-205ENST00000566228 PLEKHG5O94827 1062 aa13.27□□□□□ -0.29
SNX29-205ENST00000566228 AKAP17AQ02040 695 aaKnown RBP13.26□□□□□ -0.29
SNX29-205ENST00000566228 KIF16BQ96L93 1317 aa13.26□□□□□ -0.29
SNX29-205ENST00000566228 RUFY1Q96T51 708 aa13.26□□□□□ -0.29
SNX29-205ENST00000566228 VPS53Q5VIR6 699 aa13.26□□□□□ -0.29
SNX29-205ENST00000566228 FRAT1Q92837 279 aaPredicted RBP13.26□□□□□ -0.29
SNX29-205ENST00000566228 WWC1Q8IX03 1113 aa13.26□□□□□ -0.29
SNX29-205ENST00000566228 SF3A1Q15459 793 aaKnown RBP13.26□□□□□ -0.29
SNX29-205ENST00000566228 SENP3Q9H4L4 574 aaPredicted RBP13.26□□□□□ -0.29
SNX29-205ENST00000566228 CPLX2Q6PUV4 134 aaKnown RBP13.25□□□□□ -0.29
SNX29-205ENST00000566228 PLEKHD1A6NEE1 506 aa13.25□□□□□ -0.29
SNX29-205ENST00000566228 RGS3P49796 1198 aa13.25□□□□□ -0.29
SNX29-205ENST00000566228 CTDP1Q9Y5B0 961 aaPredicted RBP13.25□□□□□ -0.29
SNX29-205ENST00000566228 KAT6BQ8WYB5 2073 aa13.25□□□□□ -0.29
SNX29-205ENST00000566228 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.24□□□□□ -0.299e-7■■■■■ 203.4
SNX29-205ENST00000566228 R3HCC1Q9Y3T6 440 aaKnown RBP13.24□□□□□ -0.29
SNX29-205ENST00000566228 ST18O60284 1047 aa13.23□□□□□ -0.29
SNX29-205ENST00000566228 STK11IPQ8N1F8 1099 aa13.23□□□□□ -0.29
SNX29-205ENST00000566228 NOL10Q9BSC4 688 aaKnown RBP13.23□□□□□ -0.29
SNX29-205ENST00000566228 ANKRD18AQ8IVF6 992 aa13.22□□□□□ -0.29
SNX29-205ENST00000566228 TRIM34Q9BYJ4 488 aa13.22□□□□□ -0.29
SNX29-205ENST00000566228 PES1O00541 588 aaKnown RBP13.21□□□□□ -0.29
SNX29-205ENST00000566228 DCAF8L1A6NGE4 600 aa13.21□□□□□ -0.29
SNX29-205ENST00000566228 U2SURPO15042 1029 aaKnown RBP13.21□□□□□ -0.29
SNX29-205ENST00000566228 SUPT16HQ9Y5B9 1047 aaKnown RBP13.21□□□□□ -0.3
SNX29-205ENST00000566228 PDE4CQ08493 712 aa13.2□□□□□ -0.3
SNX29-205ENST00000566228 WWC2Q6AWC2 1192 aa13.2□□□□□ -0.3
SNX29-205ENST00000566228 CCDC43Q96MW1 224 aaKnown RBP13.2□□□□□ -0.3
SNX29-205ENST00000566228 RWDD1Q9H446 243 aaPredicted RBP13.2□□□□□ -0.3
SNX29-205ENST00000566228 MAP7D2Q96T17 732 aa13.2□□□□□ -0.3
SNX29-205ENST00000566228 CT47A1Q5JQC4 288 aaPredicted RBP13.2□□□□□ -0.3
SNX29-205ENST00000566228 AEBP2Q6ZN18 517 aaPredicted RBP13.2□□□□□ -0.3
SNX29-205ENST00000566228 CWC15Q9P013 229 aaKnown RBP13.2□□□□□ -0.3
SNX29-205ENST00000566228 SYNE3Q6ZMZ3 975 aa13.19□□□□□ -0.3
SNX29-205ENST00000566228 TMF1P82094 1093 aa13.19□□□□□ -0.3
SNX29-205ENST00000566228 STK31Q9BXU1 1019 aa13.19□□□□□ -0.3
SNX29-205ENST00000566228 PMFBP1Q8TBY8 1022 aa13.19□□□□□ -0.3
SNX29-205ENST00000566228 CARD11Q9BXL7 1154 aa13.19□□□□□ -0.3
SNX29-205ENST00000566228 CHIC2Q9UKJ5 165 aa13.18□□□□□ -0.3
SNX29-205ENST00000566228 DDX11L8A8MPP1 907 aa13.18□□□□□ -0.3
SNX29-205ENST00000566228 CREBRFQ8IUR6 639 aa13.18□□□□□ -0.3
SNX29-205ENST00000566228 SMC4Q9NTJ3 1288 aa13.18□□□□□ -0.3
SNX29-205ENST00000566228 ARGLU1Q9NWB6 273 aaPredicted RBP13.18□□□□□ -0.3
SNX29-205ENST00000566228 WASHC2AQ641Q2 1341 aa13.18□□□□□ -0.3
SNX29-205ENST00000566228 DCAF1Q9Y4B6 1507 aa13.18□□□□□ -0.3
SNX29-205ENST00000566228 FRAT2O75474 233 aaPredicted RBP13.17□□□□□ -0.3
SNX29-205ENST00000566228 KCNH8Q96L42 1107 aa13.17□□□□□ -0.3
SNX29-205ENST00000566228 BECN2A8MW95 431 aa13.17□□□□□ -0.3
SNX29-205ENST00000566228 LMOD3Q0VAK6 560 aa13.16□□□□□ -0.3
SNX29-205ENST00000566228 HSP90B2PQ58FF3 399 aa13.16□□□□□ -0.3
SNX29-205ENST00000566228 SKOR2Q2VWA4 1001 aaPredicted RBP13.16□□□□□ -0.3
SNX29-205ENST00000566228 ERCC4Q92889 916 aaPredicted RBP13.16□□□□□ -0.3
SNX29-205ENST00000566228 INCENPQ9NQS7 918 aa13.16□□□□□ -0.3
SNX29-205ENST00000566228 H3BQV1 296 aa13.16□□□□□ -0.3
SNX29-205ENST00000566228 IFFO2Q5TF58 517 aa13.16□□□□□ -0.3
SNX29-205ENST00000566228 HDGFL2Q7Z4V5 671 aaPredicted RBP13.16□□□□□ -0.3
SNX29-205ENST00000566228 NEUROD2Q15784 382 aa13.15□□□□□ -0.3
SNX29-205ENST00000566228 GOLGA6L7A0A1B0GV03 622 aa13.14□□□□□ -0.31
SNX29-205ENST00000566228 FEZ1Q99689 392 aa13.14□□□□□ -0.31
SNX29-205ENST00000566228 CWC22Q9HCG8 908 aaKnown RBP13.14□□□□□ -0.31
SNX29-205ENST00000566228 SEPT11Q9NVA2 429 aaKnown RBP13.14□□□□□ -0.31
SNX29-205ENST00000566228 TRIM29Q14134 588 aa13.14□□□□□ -0.31
SNX29-205ENST00000566228 HSP90AA2PQ14568 343 aaPredicted RBP13.14□□□□□ -0.31
SNX29-205ENST00000566228 GTF2E1P29083 439 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms