RNA–Protein interactions for RNA: ENST00000566093.1

CNEP1R1-207, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 4

Gene CNEP1R1, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-207ENST00000566093 ARSIQ5FYB1 569 aa9.32□□□□□ -0.92
CNEP1R1-207ENST00000566093 PHF8Q9UPP1 1060 aa9.32□□□□□ -0.92
CNEP1R1-207ENST00000566093 PTGER2P43116 358 aa9.31□□□□□ -0.92
CNEP1R1-207ENST00000566093 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.29□□□□□ -0.92
CNEP1R1-207ENST00000566093 KHSRPQ92945 711 aaKnown RBP eCLIP9.29□□□□□ -0.92
CNEP1R1-207ENST00000566093 ZFP91Q96JP5 570 aaPredicted RBP9.29□□□□□ -0.92
CNEP1R1-207ENST00000566093 ZNF316A6NFI3 1004 aaPredicted RBP9.28□□□□□ -0.92
CNEP1R1-207ENST00000566093 RIOK3O14730 519 aaKnown RBP9.27□□□□□ -0.93
CNEP1R1-207ENST00000566093 ANKRD13DQ6ZTN6 518 aa9.25□□□□□ -0.93
CNEP1R1-207ENST00000566093 FBXO22Q8NEZ5 403 aa9.25□□□□□ -0.93
CNEP1R1-207ENST00000566093 LSM11P83369 360 aaKnown RBP eCLIP9.24□□□□□ -0.93
CNEP1R1-207ENST00000566093 POTEEQ6S8J3 1075 aa9.24□□□□□ -0.93
CNEP1R1-207ENST00000566093 KIF3CO14782 793 aa9.23□□□□□ -0.93
CNEP1R1-207ENST00000566093 VGFO15240 615 aaPredicted RBP9.23□□□□□ -0.93
CNEP1R1-207ENST00000566093 NLRP6P59044 892 aa9.18□□□□□ -0.94
CNEP1R1-207ENST00000566093 C2orf72A6NCS6 295 aa9.16□□□□□ -0.94
CNEP1R1-207ENST00000566093 MFRPQ9BY79 579 aa9.16□□□□□ -0.94
CNEP1R1-207ENST00000566093 SLC34A2O95436 690 aa9.15□□□□□ -0.94
CNEP1R1-207ENST00000566093 NUDT7P0C024 238 aa9.15□□□□□ -0.94
CNEP1R1-207ENST00000566093 PBX2P40425 430 aa9.15□□□□□ -0.94
CNEP1R1-207ENST00000566093 LHX6Q9UPM6 363 aa9.15□□□□□ -0.94
CNEP1R1-207ENST00000566093 AXIN2Q9Y2T1 843 aa9.14□□□□□ -0.95
CNEP1R1-207ENST00000566093 BCL11BQ9C0K0 894 aaPredicted RBP9.12□□□□□ -0.95
CNEP1R1-207ENST00000566093 PCDHGA4Q9Y5G9 962 aa9.12□□□□□ -0.95
CNEP1R1-207ENST00000566093 KDM4FA0A1W2PPD8 638 aa9.1□□□□□ -0.95
CNEP1R1-207ENST00000566093 PLA2G2EQ9NZK7 142 aa9.09□□□□□ -0.95
CNEP1R1-207ENST00000566093 HCSTQ9UBK5 93 aa9.07□□□□□ -0.96
CNEP1R1-207ENST00000566093 ADGRD1Q6QNK2 874 aa9.06□□□□□ -0.96
CNEP1R1-207ENST00000566093 STK24Q9Y6E0 443 aa9.06□□□□□ -0.96
CNEP1R1-207ENST00000566093 ARHGAP33O14559 1287 aa9.04□□□□□ -0.96
CNEP1R1-207ENST00000566093 HRO43593 1189 aa9.04□□□□□ -0.96
CNEP1R1-207ENST00000566093 TK2O00142 265 aa9.01□□□□□ -0.97
CNEP1R1-207ENST00000566093 RTN4Q9NQC3 1192 aaKnown RBP9.01□□□□□ -0.97
CNEP1R1-207ENST00000566093 DMRTA1Q5VZB9 504 aa9□□□□□ -0.97
CNEP1R1-207ENST00000566093 TAOK2Q9UL54 1235 aa9□□□□□ -0.97
CNEP1R1-207ENST00000566093 PPP1R37O75864 691 aa8.99□□□□□ -0.97
CNEP1R1-207ENST00000566093 PTCD2Q8WV60 388 aaKnown RBP8.99□□□□□ -0.97
CNEP1R1-207ENST00000566093 STK25O00506 426 aa8.98□□□□□ -0.97
CNEP1R1-207ENST00000566093 TMC2Q8TDI7 906 aa8.98□□□□□ -0.97
CNEP1R1-207ENST00000566093 PSDA5PKW4 1024 aaPredicted RBP8.97□□□□□ -0.97
CNEP1R1-207ENST00000566093 AMER1Q5JTC6 1135 aaPredicted RBP8.97□□□□□ -0.97
CNEP1R1-207ENST00000566093 PSEN2P49810 448 aa8.96□□□□□ -0.98
CNEP1R1-207ENST00000566093 FOXK1P85037 733 aa8.91□□□□□ -0.98
CNEP1R1-207ENST00000566093 PKD2Q13563 968 aa8.91□□□□□ -0.98
CNEP1R1-207ENST00000566093 RGL2O15211 777 aa8.9□□□□□ -0.98
CNEP1R1-207ENST00000566093 KCTD12Q96CX2 325 aaKnown RBP8.9□□□□□ -0.98
CNEP1R1-207ENST00000566093 PLPP6Q8IY26 295 aa8.88□□□□□ -0.99
CNEP1R1-207ENST00000566093 ECM2O94769 699 aaPredicted RBP8.87□□□□□ -0.99
CNEP1R1-207ENST00000566093 GPHNQ9NQX3 736 aaPredicted RBP8.87□□□□□ -0.99
CNEP1R1-207ENST00000566093 PPP4R3BQ5MIZ7 849 aa8.86□□□□□ -0.99
CNEP1R1-207ENST00000566093 IFFO2Q5TF58 517 aa8.85□□□□□ -0.99
CNEP1R1-207ENST00000566093 VPS9D1Q9Y2B5 631 aa8.85□□□□□ -0.99
CNEP1R1-207ENST00000566093 DSG2Q14126 1118 aa8.84□□□□□ -0.99
CNEP1R1-207ENST00000566093 BHMG1C9JSJ3 638 aaPredicted RBP8.82□□□□□ -1
CNEP1R1-207ENST00000566093 RGS20O76081 388 aa8.82□□□□□ -1
CNEP1R1-207ENST00000566093 KCNK17Q96T54 332 aa8.82□□□□□ -1
CNEP1R1-207ENST00000566093 SLC4A5Q9BY07 1137 aa8.82□□□□□ -1
CNEP1R1-207ENST00000566093 OXER1Q8TDS5 423 aa8.8□□□□□ -1
CNEP1R1-207ENST00000566093 PTPN5P54829 565 aa8.79□□□□□ -1
CNEP1R1-207ENST00000566093 TBC1D12O60347 775 aa8.78□□□□□ -1
CNEP1R1-207ENST00000566093 THSD4Q6ZMP0 1018 aa8.77□□□□□ -1.01
CNEP1R1-207ENST00000566093 STAC3Q96MF2 364 aa8.77□□□□□ -1.01
CNEP1R1-207ENST00000566093 BCL2L12Q9HB09 334 aa8.77□□□□□ -1.01
CNEP1R1-207ENST00000566093 A0A0G2JS52 829 aa8.75□□□□□ -1.01
CNEP1R1-207ENST00000566093 ZBED2Q9BTP6 218 aa8.74□□□□□ -1.01
CNEP1R1-207ENST00000566093 FOSBP53539 338 aa8.73□□□□□ -1.01
CNEP1R1-207ENST00000566093 ZNF454Q8N9F8 522 aa8.72□□□□□ -1.01
CNEP1R1-207ENST00000566093 KCNH8Q96L42 1107 aa8.72□□□□□ -1.01
CNEP1R1-207ENST00000566093 IRX2Q9BZI1 471 aaPredicted RBP8.72□□□□□ -1.01
CNEP1R1-207ENST00000566093 ANO8Q9HCE9 1232 aaPredicted RBP8.72□□□□□ -1.01
CNEP1R1-207ENST00000566093 DCAF8L2P0C7V8 631 aa8.71□□□□□ -1.02
CNEP1R1-207ENST00000566093 CRISPLD2Q9H0B8 497 aa8.71□□□□□ -1.02
CNEP1R1-207ENST00000566093 HS6ST3Q8IZP7 471 aa8.7□□□□□ -1.02
CNEP1R1-207ENST00000566093 UPF1Q92900 1129 aaKnown RBP eCLIP8.69□□□□□ -1.02
CNEP1R1-207ENST00000566093 WNT2BQ93097 391 aa8.68□□□□□ -1.02
CNEP1R1-207ENST00000566093 PTPREP23469 700 aa8.67□□□□□ -1.02
CNEP1R1-207ENST00000566093 ADAM33Q9BZ11 813 aa8.66□□□□□ -1.02
CNEP1R1-207ENST00000566093 NKX1-1Q15270 411 aaPredicted RBP8.65□□□□□ -1.02
CNEP1R1-207ENST00000566093 MRPL50Q8N5N7 158 aaKnown RBP8.65□□□□□ -1.02
CNEP1R1-207ENST00000566093 DNAJC5Q9H3Z4 198 aa8.65□□□□□ -1.02
CNEP1R1-207ENST00000566093 ITGBL1O95965 494 aaPredicted RBP8.64□□□□□ -1.03
CNEP1R1-207ENST00000566093 JPH4Q96JJ6 628 aa8.64□□□□□ -1.03
CNEP1R1-207ENST00000566093 NCKAP5LQ9HCH0 1330 aa8.63□□□□□ -1.03
CNEP1R1-207ENST00000566093 PPP1R15BQ5SWA1 713 aa8.63□□□□□ -1.03
CNEP1R1-207ENST00000566093 ZDHHC16Q969W1 377 aa8.62□□□□□ -1.03
CNEP1R1-207ENST00000566093 GOLGA8CPA6NN73 597 aa8.61□□□□□ -1.03
CNEP1R1-207ENST00000566093 EVI5O60447 810 aa8.6□□□□□ -1.03
CNEP1R1-207ENST00000566093 CHGAP10645 457 aaKnown RBP8.6□□□□□ -1.03
CNEP1R1-207ENST00000566093 NBPF3Q9H094 633 aa8.6□□□□□ -1.03
CNEP1R1-207ENST00000566093 RABGEF1Q9UJ41 708 aa8.57□□□□□ -1.04
CNEP1R1-207ENST00000566093 COL9A1P20849 921 aa8.56□□□□□ -1.04
CNEP1R1-207ENST00000566093 PROX2Q3B8N5 592 aa8.56□□□□□ -1.04
CNEP1R1-207ENST00000566093 PPP1R3GB7ZBB8 358 aa8.55□□□□□ -1.04
CNEP1R1-207ENST00000566093 PDE4AP27815 886 aa8.55□□□□□ -1.04
CNEP1R1-207ENST00000566093 PCDHGA10Q9Y5H3 936 aa8.55□□□□□ -1.04
CNEP1R1-207ENST00000566093 LCE2BO14633 110 aa8.54□□□□□ -1.04
CNEP1R1-207ENST00000566093 SOWAHBA6NEL2 793 aa8.53□□□□□ -1.04
CNEP1R1-207ENST00000566093 BCAMP50895 628 aa8.53□□□□□ -1.04
CNEP1R1-207ENST00000566093 LAPTM4BQ86VI4 370 aa8.52□□□□□ -1.05
CNEP1R1-207ENST00000566093 ANKK1Q8NFD2 765 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms