RNA–Protein interactions for RNA: ENST00000565697.1

CNOT1-208, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 385 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-208ENST00000565697 CASKIN1Q8WXD9 1431 aa15.94■□□□□ 0.14
CNOT1-208ENST00000565697 COL17A1Q9UMD9 1497 aaPredicted RBP15.93■□□□□ 0.14
CNOT1-208ENST00000565697 CCDC18Q5T9S5 1454 aa15.91■□□□□ 0.14
CNOT1-208ENST00000565697 NEO1Q92859 1461 aa15.91■□□□□ 0.14
CNOT1-208ENST00000565697 ARAP3Q8WWN8 1544 aa15.9■□□□□ 0.14
CNOT1-208ENST00000565697 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.89■□□□□ 0.13
CNOT1-208ENST00000565697 PCF11O94913 1555 aaKnown RBP15.89■□□□□ 0.13
CNOT1-208ENST00000565697 FYCO1Q9BQS8 1478 aa15.89■□□□□ 0.13
CNOT1-208ENST00000565697 TROQ12816 1431 aaPredicted RBP15.87■□□□□ 0.13
CNOT1-208ENST00000565697 CEP162Q5TB80 1403 aa15.87■□□□□ 0.13
CNOT1-208ENST00000565697 CFAP74Q9C0B2 1584 aa15.86■□□□□ 0.13
CNOT1-208ENST00000565697 TTC37Q6PGP7 1564 aa15.85■□□□□ 0.13
CNOT1-208ENST00000565697 KIF14Q15058 1648 aa15.85■□□□□ 0.13
CNOT1-208ENST00000565697 LRRIQ1Q96JM4 1722 aa15.85■□□□□ 0.13
CNOT1-208ENST00000565697 FANCAO15360 1455 aa15.84■□□□□ 0.13
CNOT1-208ENST00000565697 PLCH2O75038 1416 aa15.84■□□□□ 0.13
CNOT1-208ENST00000565697 AKNAQ7Z591 1439 aa15.83■□□□□ 0.12
CNOT1-208ENST00000565697 LOC105371045A0A1W2PR82 267 aa15.82■□□□□ 0.12
CNOT1-208ENST00000565697 MYO5CQ9NQX4 1742 aa15.8■□□□□ 0.12
CNOT1-208ENST00000565697 EFCAB2Q5VUJ9 269 aa15.8■□□□□ 0.12
CNOT1-208ENST00000565697 DENND4BO75064 1496 aaPredicted RBP15.79■□□□□ 0.12
CNOT1-208ENST00000565697 RAPGEF3O95398 923 aa15.79■□□□□ 0.12
CNOT1-208ENST00000565697 APLP2Q06481 763 aa15.79■□□□□ 0.12
CNOT1-208ENST00000565697 ABCB7O75027 752 aa15.77■□□□□ 0.12
CNOT1-208ENST00000565697 ZNF219Q9P2Y4 722 aaPredicted RBP15.77■□□□□ 0.12
CNOT1-208ENST00000565697 KDM4FA0A1W2PPD8 638 aa15.76■□□□□ 0.11
CNOT1-208ENST00000565697 ADGRL1O94910 1474 aa15.76■□□□□ 0.11
CNOT1-208ENST00000565697 ARHGAP5Q13017 1502 aa15.75■□□□□ 0.11
CNOT1-208ENST00000565697 SCAPERQ9BY12 1400 aa15.74■□□□□ 0.11
CNOT1-208ENST00000565697 MTUS2Q5JR59 1369 aa15.74■□□□□ 0.11
CNOT1-208ENST00000565697 FRMPD1Q5SYB0 1578 aa15.73■□□□□ 0.11
CNOT1-208ENST00000565697 RICTORQ6R327 1708 aa15.72■□□□□ 0.11
CNOT1-208ENST00000565697 VPS8Q8N3P4 1428 aa15.71■□□□□ 0.11
CNOT1-208ENST00000565697 PREX2Q70Z35 1606 aa15.7■□□□□ 0.1
CNOT1-208ENST00000565697 MAGI2Q86UL8 1455 aa15.7■□□□□ 0.1
CNOT1-208ENST00000565697 POGZQ7Z3K3 1410 aa15.69■□□□□ 0.1
CNOT1-208ENST00000565697 ZMYM4Q5VZL5 1548 aa15.69■□□□□ 0.1
CNOT1-208ENST00000565697 CDC42BPBQ9Y5S2 1711 aa15.69■□□□□ 0.1
CNOT1-208ENST00000565697 EHBP1L1Q8N3D4 1523 aa15.68■□□□□ 0.1
CNOT1-208ENST00000565697 CCNB3Q8WWL7 1395 aa15.67■□□□□ 0.1
CNOT1-208ENST00000565697 ZNF518AQ6AHZ1 1483 aa15.66■□□□□ 0.1
CNOT1-208ENST00000565697 CDC42BPAQ5VT25 1732 aa15.66■□□□□ 0.1
CNOT1-208ENST00000565697 ZFYVE16Q7Z3T8 1539 aa15.66■□□□□ 0.1
CNOT1-208ENST00000565697 ARHGEF40Q8TER5 1519 aa15.66■□□□□ 0.1
CNOT1-208ENST00000565697 ARID4BQ4LE39 1312 aaPredicted RBP15.66■□□□□ 0.1
CNOT1-208ENST00000565697 GPATCH8Q9UKJ3 1502 aaKnown RBP15.65■□□□□ 0.1
CNOT1-208ENST00000565697 CFDP1Q9UEE9 299 aaPredicted RBP15.64■□□□□ 0.09
CNOT1-208ENST00000565697 MYT1LQ9UL68 1186 aa15.63■□□□□ 0.09
CNOT1-208ENST00000565697 ZNF777Q9ULD5 760 aaPredicted RBP15.63■□□□□ 0.09
CNOT1-208ENST00000565697 TIAM1Q13009 1591 aa15.62■□□□□ 0.09
CNOT1-208ENST00000565697 AFAP1Q8N556 730 aa15.62■□□□□ 0.09
CNOT1-208ENST00000565697 ABCC1P33527 1531 aa15.62■□□□□ 0.09
CNOT1-208ENST00000565697 YEATS2Q9ULM3 1422 aa15.61■□□□□ 0.09
CNOT1-208ENST00000565697 PLEKHH2Q8IVE3 1493 aa15.61■□□□□ 0.09
CNOT1-208ENST00000565697 RBM42Q9BTD8 480 aaKnown RBP15.61■□□□□ 0.09
CNOT1-208ENST00000565697 MAP3K1Q13233 1512 aa15.61■□□□□ 0.09
CNOT1-208ENST00000565697 KDM5CP41229 1560 aa15.61■□□□□ 0.09
CNOT1-208ENST00000565697 SUPT6HQ7KZ85 1726 aaKnown RBP15.6■□□□□ 0.09
CNOT1-208ENST00000565697 SLC4A2P04920 1241 aa15.6■□□□□ 0.09
CNOT1-208ENST00000565697 ITSN2Q9NZM3 1697 aa15.6■□□□□ 0.09
CNOT1-208ENST00000565697 ATP10AO60312 1499 aa15.59■□□□□ 0.09
CNOT1-208ENST00000565697 C9orf84Q5VXU9 1444 aa15.59■□□□□ 0.09
CNOT1-208ENST00000565697 KIAA1107Q9UPP5 1409 aa15.59■□□□□ 0.09
CNOT1-208ENST00000565697 TRAPPC8Q9Y2L5 1435 aa15.58■□□□□ 0.08
CNOT1-208ENST00000565697 MLH3Q9UHC1 1453 aa15.58■□□□□ 0.08
CNOT1-208ENST00000565697 ARHGEF12Q9NZN5 1544 aa15.58■□□□□ 0.08
CNOT1-208ENST00000565697 SAMD9LQ8IVG5 1584 aa15.58■□□□□ 0.08
CNOT1-208ENST00000565697 HECW2Q9P2P5 1572 aa15.58■□□□□ 0.08
CNOT1-208ENST00000565697 BCORL1Q5H9F3 1711 aa15.57■□□□□ 0.08
CNOT1-208ENST00000565697 NCOA2Q15596 1464 aa15.57■□□□□ 0.08
CNOT1-208ENST00000565697 LRRC9Q6ZRR7 1453 aa15.57■□□□□ 0.08
CNOT1-208ENST00000565697 ADAMTSL3P82987 1691 aa15.57■□□□□ 0.08
CNOT1-208ENST00000565697 SYCP2Q9BX26 1530 aa15.54■□□□□ 0.08
CNOT1-208ENST00000565697 HNRNPMP52272 730 aaKnown RBP eCLIP15.54■□□□□ 0.08
CNOT1-208ENST00000565697 SPAG9O60271 1321 aaKnown RBP15.53■□□□□ 0.08
CNOT1-208ENST00000565697 RSPH4AQ5TD94 716 aa15.52■□□□□ 0.08
CNOT1-208ENST00000565697 CHRDL2Q6WN34 429 aa15.52■□□□□ 0.08
CNOT1-208ENST00000565697 REREQ9P2R6 1566 aa15.52■□□□□ 0.07
CNOT1-208ENST00000565697 DIP2CQ9Y2E4 1556 aa15.51■□□□□ 0.07
CNOT1-208ENST00000565697 PTPRMP28827 1452 aa15.51■□□□□ 0.07
CNOT1-208ENST00000565697 MADDQ8WXG6 1647 aa15.5■□□□□ 0.07
CNOT1-208ENST00000565697 MLECQ14165 292 aa15.5■□□□□ 0.07
CNOT1-208ENST00000565697 KANK4Q5T7N3 995 aaPredicted RBP15.5■□□□□ 0.07
CNOT1-208ENST00000565697 KIDINS220Q9ULH0 1771 aa15.49■□□□□ 0.07
CNOT1-208ENST00000565697 ABCA6Q8N139 1617 aa15.49■□□□□ 0.07
CNOT1-208ENST00000565697 ZNF644Q9H582 1327 aaPredicted RBP15.48■□□□□ 0.07
CNOT1-208ENST00000565697 SIGLEC1Q9BZZ2 1709 aa15.48■□□□□ 0.07
CNOT1-208ENST00000565697 MBD5Q9P267 1494 aa15.47■□□□□ 0.07
CNOT1-208ENST00000565697 AGLP35573 1532 aa15.47■□□□□ 0.07
CNOT1-208ENST00000565697 ATP7AQ04656 1500 aa15.47■□□□□ 0.07
CNOT1-208ENST00000565697 CAMSAP2Q08AD1 1489 aa15.46■□□□□ 0.07
CNOT1-208ENST00000565697 RIMS1Q86UR5 1692 aaKnown RBP15.46■□□□□ 0.07
CNOT1-208ENST00000565697 RTEL1-TNFRSF6BF6WH68 1400 aa15.45■□□□□ 0.06
CNOT1-208ENST00000565697 MIA2Q96PC5 1412 aa15.45■□□□□ 0.06
CNOT1-208ENST00000565697 SAMD1Q6SPF0 538 aaPredicted RBP15.45■□□□□ 0.06
CNOT1-208ENST00000565697 CCDC141Q6ZP82 1450 aa15.45■□□□□ 0.06
CNOT1-208ENST00000565697 INO80Q9ULG1 1556 aaPredicted RBP15.45■□□□□ 0.06
CNOT1-208ENST00000565697 FER1L4A9Z1Z3 1794 aa15.44■□□□□ 0.06
CNOT1-208ENST00000565697 MYOM3Q5VTT5 1437 aa15.44■□□□□ 0.06
CNOT1-208ENST00000565697 ESF1Q9H501 851 aaKnown RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 152.8 ms