RNA–Protein interactions for RNA: ENST00000565646.5

CFDP1-205, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-205ENST00000565646 CDC42BPBQ9Y5S2 1711 aa19.83■□□□□ 0.77
CFDP1-205ENST00000565646 PREX2Q70Z35 1606 aa19.81■□□□□ 0.76
CFDP1-205ENST00000565646 GPATCH8Q9UKJ3 1502 aaKnown RBP19.81■□□□□ 0.76
CFDP1-205ENST00000565646 PHLDB1Q86UU1 1377 aa19.79■□□□□ 0.76
CFDP1-205ENST00000565646 PLCH2O75038 1416 aa19.78■□□□□ 0.76
CFDP1-205ENST00000565646 CCNB3Q8WWL7 1395 aa19.78■□□□□ 0.76
CFDP1-205ENST00000565646 ITSN2Q9NZM3 1697 aa19.78■□□□□ 0.76
CFDP1-205ENST00000565646 ARAP3Q8WWN8 1544 aa19.77■□□□□ 0.76
CFDP1-205ENST00000565646 MYOM3Q5VTT5 1437 aa19.75■□□□□ 0.75
CFDP1-205ENST00000565646 ARHGAP5Q13017 1502 aa19.72■□□□□ 0.75
CFDP1-205ENST00000565646 FANCAO15360 1455 aa19.71■□□□□ 0.75
CFDP1-205ENST00000565646 RAPGEF3O95398 923 aa19.69■□□□□ 0.74
CFDP1-205ENST00000565646 CFDP1Q9UEE9 299 aaPredicted RBP19.69■□□□□ 0.74
CFDP1-205ENST00000565646 SAMD9LQ8IVG5 1584 aa19.69■□□□□ 0.74
CFDP1-205ENST00000565646 CFAP74Q9C0B2 1584 aa19.69■□□□□ 0.74
CFDP1-205ENST00000565646 FGD6Q6ZV73 1430 aa19.68■□□□□ 0.74
CFDP1-205ENST00000565646 MIA2Q96PC5 1412 aa19.68■□□□□ 0.74
CFDP1-205ENST00000565646 NEO1Q92859 1461 aa19.67■□□□□ 0.74
CFDP1-205ENST00000565646 EFCAB2Q5VUJ9 269 aa19.67■□□□□ 0.74
CFDP1-205ENST00000565646 ADAMTSL3P82987 1691 aa19.67■□□□□ 0.74
CFDP1-205ENST00000565646 PTPN23Q9H3S7 1636 aa19.65■□□□□ 0.74
CFDP1-205ENST00000565646 ZNF644Q9H582 1327 aaPredicted RBP19.65■□□□□ 0.74
CFDP1-205ENST00000565646 AKNAQ7Z591 1439 aa19.65■□□□□ 0.74
CFDP1-205ENST00000565646 PTPRMP28827 1452 aa19.64■□□□□ 0.73
CFDP1-205ENST00000565646 ABCC1P33527 1531 aa19.64■□□□□ 0.73
CFDP1-205ENST00000565646 CAMSAP2Q08AD1 1489 aa19.63■□□□□ 0.73
CFDP1-205ENST00000565646 TCOF1Q13428 1488 aaKnown RBP19.63■□□□□ 0.73
CFDP1-205ENST00000565646 ARHGEF12Q9NZN5 1544 aa19.62■□□□□ 0.73
CFDP1-205ENST00000565646 RRBP1Q9P2E9 1410 aaKnown RBP19.62■□□□□ 0.73
CFDP1-205ENST00000565646 ARID4BQ4LE39 1312 aaPredicted RBP19.62■□□□□ 0.73
CFDP1-205ENST00000565646 ZNF777Q9ULD5 760 aaPredicted RBP19.62■□□□□ 0.73
CFDP1-205ENST00000565646 BCORL1Q5H9F3 1711 aa19.61■□□□□ 0.73
CFDP1-205ENST00000565646 SYCP2Q9BX26 1530 aa19.6■□□□□ 0.73
CFDP1-205ENST00000565646 KIAA1107Q9UPP5 1409 aa19.59■□□□□ 0.73
CFDP1-205ENST00000565646 FBXO41Q8TF61 875 aa19.58■□□□□ 0.72
CFDP1-205ENST00000565646 PLEKHH2Q8IVE3 1493 aa19.58■□□□□ 0.72
CFDP1-205ENST00000565646 MBD5Q9P267 1494 aa19.58■□□□□ 0.72
CFDP1-205ENST00000565646 SCAPERQ9BY12 1400 aa19.58■□□□□ 0.72
CFDP1-205ENST00000565646 FRMPD1Q5SYB0 1578 aa19.57■□□□□ 0.72
CFDP1-205ENST00000565646 RICTORQ6R327 1708 aa19.57■□□□□ 0.72
CFDP1-205ENST00000565646 MADDQ8WXG6 1647 aa19.57■□□□□ 0.72
CFDP1-205ENST00000565646 HNRNPMP52272 730 aaKnown RBP eCLIP19.55■□□□□ 0.72
CFDP1-205ENST00000565646 ARHGEF5Q12774 1597 aa19.55■□□□□ 0.72
CFDP1-205ENST00000565646 TRAPPC8Q9Y2L5 1435 aa19.55■□□□□ 0.72
CFDP1-205ENST00000565646 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.54■□□□□ 0.72
CFDP1-205ENST00000565646 POGZQ7Z3K3 1410 aa19.53■□□□□ 0.72
CFDP1-205ENST00000565646 DENND4BO75064 1496 aaPredicted RBP19.53■□□□□ 0.72
CFDP1-205ENST00000565646 RIMS1Q86UR5 1692 aaKnown RBP19.52■□□□□ 0.72
CFDP1-205ENST00000565646 DNMT1P26358 1616 aaKnown RBP19.52■□□□□ 0.72
CFDP1-205ENST00000565646 FAM50AQ14320 339 aaKnown RBP19.52■□□□□ 0.72
CFDP1-205ENST00000565646 CROCC2H7BZ55 1655 aa19.51■□□□□ 0.71
CFDP1-205ENST00000565646 KDM5CP41229 1560 aa19.5■□□□□ 0.71
CFDP1-205ENST00000565646 ABCC5O15440 1437 aa19.5■□□□□ 0.71
CFDP1-205ENST00000565646 ZNF518AQ6AHZ1 1483 aa19.49■□□□□ 0.71
CFDP1-205ENST00000565646 CCDC141Q6ZP82 1450 aa19.49■□□□□ 0.71
CFDP1-205ENST00000565646 AFAP1Q8N556 730 aa19.49■□□□□ 0.71
CFDP1-205ENST00000565646 ARHGEF40Q8TER5 1519 aa19.49■□□□□ 0.71
CFDP1-205ENST00000565646 DAPK1P53355 1430 aa19.48■□□□□ 0.71
CFDP1-205ENST00000565646 ZMYM4Q5VZL5 1548 aa19.47■□□□□ 0.71
CFDP1-205ENST00000565646 PLPPR3Q6T4P5 718 aa19.47■□□□□ 0.71
CFDP1-205ENST00000565646 PTPRKQ15262 1439 aa19.46■□□□□ 0.71
CFDP1-205ENST00000565646 LMTK3Q96Q04 1460 aa19.46■□□□□ 0.71
CFDP1-205ENST00000565646 RSPH4AQ5TD94 716 aa19.45■□□□□ 0.7
CFDP1-205ENST00000565646 INO80Q9ULG1 1556 aaPredicted RBP19.44■□□□□ 0.7
CFDP1-205ENST00000565646 KIDINS220Q9ULH0 1771 aa19.44■□□□□ 0.7
CFDP1-205ENST00000565646 MAST1Q9Y2H9 1570 aa19.44■□□□□ 0.7
CFDP1-205ENST00000565646 SHANK2Q9UPX8 1470 aa19.43■□□□□ 0.7
CFDP1-205ENST00000565646 ZFYVE16Q7Z3T8 1539 aa19.42■□□□□ 0.7
CFDP1-205ENST00000565646 MLH3Q9UHC1 1453 aa19.41■□□□□ 0.7
CFDP1-205ENST00000565646 HSPA2P54652 639 aa19.41■□□□□ 0.7
CFDP1-205ENST00000565646 C9orf84Q5VXU9 1444 aa19.41■□□□□ 0.7
CFDP1-205ENST00000565646 ATP7AQ04656 1500 aa19.41■□□□□ 0.7
CFDP1-205ENST00000565646 SIGLEC1Q9BZZ2 1709 aa19.4■□□□□ 0.7
CFDP1-205ENST00000565646 SPAG9O60271 1321 aaKnown RBP19.4■□□□□ 0.7
CFDP1-205ENST00000565646 MLECQ14165 292 aa19.39■□□□□ 0.69
CFDP1-205ENST00000565646 RTEL1-TNFRSF6BF6WH68 1400 aa19.39■□□□□ 0.69
CFDP1-205ENST00000565646 YEATS2Q9ULM3 1422 aa19.39■□□□□ 0.69
CFDP1-205ENST00000565646 ADGBQ8N7X0 1667 aa19.39■□□□□ 0.69
CFDP1-205ENST00000565646 FER1L4A9Z1Z3 1794 aa19.38■□□□□ 0.69
CFDP1-205ENST00000565646 ITGAEP38570 1179 aa19.38■□□□□ 0.69
CFDP1-205ENST00000565646 ABCA6Q8N139 1617 aa19.38■□□□□ 0.69
CFDP1-205ENST00000565646 ADGRL2O95490 1459 aa19.37■□□□□ 0.69
CFDP1-205ENST00000565646 MAGI2Q86UL8 1455 aa19.37■□□□□ 0.69
CFDP1-205ENST00000565646 TSPY4P0CV99 314 aa19.37■□□□□ 0.69
CFDP1-205ENST00000565646 TSPY10P0CW01 314 aa19.37■□□□□ 0.69
CFDP1-205ENST00000565646 PLXNC1O60486 1568 aa19.36■□□□□ 0.69
CFDP1-205ENST00000565646 CHIC2Q9UKJ5 165 aa19.36■□□□□ 0.69
CFDP1-205ENST00000565646 DIP2CQ9Y2E4 1556 aa19.36■□□□□ 0.69
CFDP1-205ENST00000565646 TRIM26Q12899 539 aaPredicted RBP19.34■□□□□ 0.69
CFDP1-205ENST00000565646 NCOA1Q15788 1441 aa19.34■□□□□ 0.69
CFDP1-205ENST00000565646 ROCK1Q13464 1354 aa19.32■□□□□ 0.68
CFDP1-205ENST00000565646 ANKRD30AQ9BXX3 1397 aa19.3■□□□□ 0.68
CFDP1-205ENST00000565646 MYT1LQ9UL68 1186 aa19.29■□□□□ 0.68
CFDP1-205ENST00000565646 ATP10AO60312 1499 aa19.28■□□□□ 0.68
CFDP1-205ENST00000565646 RRP7BPQ9NSQ0 103 aa19.28■□□□□ 0.68
CFDP1-205ENST00000565646 KIF15Q9NS87 1388 aa19.28■□□□□ 0.68
CFDP1-205ENST00000565646 REREQ9P2R6 1566 aa19.27■□□□□ 0.68
CFDP1-205ENST00000565646 CERKQ8TCT0 537 aa19.27■□□□□ 0.68
CFDP1-205ENST00000565646 GCC2Q8IWJ2 1684 aa19.27■□□□□ 0.67
CFDP1-205ENST00000565646 NAIPQ13075 1403 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms