RNA–Protein interactions for RNA: ENST00000565582.5

FANCA-218, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-218ENST00000565582 PTPRMP28827 1452 aa19.56■□□□□ 0.72
FANCA-218ENST00000565582 POGZQ7Z3K3 1410 aa19.55■□□□□ 0.72
FANCA-218ENST00000565582 SCAPERQ9BY12 1400 aa19.55■□□□□ 0.72
FANCA-218ENST00000565582 CDK11AQ9UQ88 783 aaPredicted RBP19.53■□□□□ 0.72
FANCA-218ENST00000565582 CLIP1P30622 1438 aa19.52■□□□□ 0.72
FANCA-218ENST00000565582 CASKIN1Q8WXD9 1431 aa19.52■□□□□ 0.72
FANCA-218ENST00000565582 RIMS1Q86UR5 1692 aaKnown RBP19.52■□□□□ 0.71
FANCA-218ENST00000565582 ARHGAP5Q13017 1502 aa19.51■□□□□ 0.71
FANCA-218ENST00000565582 CCDC18Q5T9S5 1454 aa19.49■□□□□ 0.71
FANCA-218ENST00000565582 EFCAB2Q5VUJ9 269 aa19.48■□□□□ 0.71
FANCA-218ENST00000565582 MAGI2Q86UL8 1455 aa19.48■□□□□ 0.71
FANCA-218ENST00000565582 FYCO1Q9BQS8 1478 aa19.48■□□□□ 0.71
FANCA-218ENST00000565582 PREX2Q70Z35 1606 aa19.46■□□□□ 0.71
FANCA-218ENST00000565582 CDC42BPBQ9Y5S2 1711 aa19.45■□□□□ 0.7
FANCA-218ENST00000565582 ZNF518AQ6AHZ1 1483 aa19.42■□□□□ 0.7
FANCA-218ENST00000565582 KDM5CP41229 1560 aa19.42■□□□□ 0.7
FANCA-218ENST00000565582 MLECQ14165 292 aa19.42■□□□□ 0.7
FANCA-218ENST00000565582 PLPPR3Q6T4P5 718 aa19.42■□□□□ 0.7
FANCA-218ENST00000565582 ABCC1P33527 1531 aa19.41■□□□□ 0.7
FANCA-218ENST00000565582 CDC42BPAQ5VT25 1732 aa19.4■□□□□ 0.7
FANCA-218ENST00000565582 FER1L4A9Z1Z3 1794 aa19.4■□□□□ 0.7
FANCA-218ENST00000565582 C9orf84Q5VXU9 1444 aa19.4■□□□□ 0.7
FANCA-218ENST00000565582 ATP10AO60312 1499 aa19.4■□□□□ 0.7
FANCA-218ENST00000565582 AFAP1Q8N556 730 aa19.39■□□□□ 0.69
FANCA-218ENST00000565582 LMTK3Q96Q04 1460 aa19.39■□□□□ 0.69
FANCA-218ENST00000565582 ARHGEF12Q9NZN5 1544 aa19.39■□□□□ 0.69
FANCA-218ENST00000565582 ITSN2Q9NZM3 1697 aa19.38■□□□□ 0.69
FANCA-218ENST00000565582 DIP2CQ9Y2E4 1556 aa19.38■□□□□ 0.69
FANCA-218ENST00000565582 ABCA6Q8N139 1617 aa19.37■□□□□ 0.69
FANCA-218ENST00000565582 ILDR1Q86SU0 546 aaPredicted RBP19.37■□□□□ 0.69
FANCA-218ENST00000565582 TRAPPC8Q9Y2L5 1435 aa19.36■□□□□ 0.69
FANCA-218ENST00000565582 MYT1LQ9UL68 1186 aa19.34■□□□□ 0.69
FANCA-218ENST00000565582 SAMD9LQ8IVG5 1584 aa19.32■□□□□ 0.68
FANCA-218ENST00000565582 CEP162Q5TB80 1403 aa19.31■□□□□ 0.68
FANCA-218ENST00000565582 SYCP2Q9BX26 1530 aa19.3■□□□□ 0.68
FANCA-218ENST00000565582 MLH3Q9UHC1 1453 aa19.3■□□□□ 0.68
FANCA-218ENST00000565582 GPATCH8Q9UKJ3 1502 aaKnown RBP19.3■□□□□ 0.68
FANCA-218ENST00000565582 ZNF777Q9ULD5 760 aaPredicted RBP19.29■□□□□ 0.68
FANCA-218ENST00000565582 REREQ9P2R6 1566 aa19.28■□□□□ 0.68
FANCA-218ENST00000565582 HSPA2P54652 639 aa19.28■□□□□ 0.68
FANCA-218ENST00000565582 KIDINS220Q9ULH0 1771 aa19.28■□□□□ 0.68
FANCA-218ENST00000565582 MTUS2Q5JR59 1369 aa19.26■□□□□ 0.67
FANCA-218ENST00000565582 CEBPAP49715 358 aaPredicted RBP19.24■□□□□ 0.67
FANCA-218ENST00000565582 TIAM1Q13009 1591 aa19.23■□□□□ 0.67
FANCA-218ENST00000565582 CCNB3Q8WWL7 1395 aa19.23■□□□□ 0.67
FANCA-218ENST00000565582 EHBP1L1Q8N3D4 1523 aa19.23■□□□□ 0.67
FANCA-218ENST00000565582 AGLP35573 1532 aa19.21■□□□□ 0.67
FANCA-218ENST00000565582 PREX1Q8TCU6 1659 aa19.21■□□□□ 0.67
FANCA-218ENST00000565582 HNRNPMP52272 730 aaKnown RBP eCLIP19.21■□□□□ 0.67
FANCA-218ENST00000565582 INO80Q9ULG1 1556 aaPredicted RBP19.19■□□□□ 0.66
FANCA-218ENST00000565582 CFDP1Q9UEE9 299 aaPredicted RBP19.19■□□□□ 0.66
FANCA-218ENST00000565582 ATP7AQ04656 1500 aa19.19■□□□□ 0.66
FANCA-218ENST00000565582 C3P01024 1663 aa19.18■□□□□ 0.66
FANCA-218ENST00000565582 SPAG9O60271 1321 aaKnown RBP19.17■□□□□ 0.66
FANCA-218ENST00000565582 PLEKHH2Q8IVE3 1493 aa19.16■□□□□ 0.66
FANCA-218ENST00000565582 SUPT6HQ7KZ85 1726 aaKnown RBP19.16■□□□□ 0.66
FANCA-218ENST00000565582 KIAA1107Q9UPP5 1409 aa19.16■□□□□ 0.66
FANCA-218ENST00000565582 ZNF644Q9H582 1327 aaPredicted RBP19.15■□□□□ 0.66
FANCA-218ENST00000565582 LOC105371045A0A1W2PR82 267 aa19.14■□□□□ 0.65
FANCA-218ENST00000565582 PLXNC1O60486 1568 aa19.13■□□□□ 0.65
FANCA-218ENST00000565582 NCOA2Q15596 1464 aa19.11■□□□□ 0.65
FANCA-218ENST00000565582 UHRF1BP1Q6BDS2 1440 aa19.11■□□□□ 0.65
FANCA-218ENST00000565582 ESF1Q9H501 851 aaKnown RBP19.1■□□□□ 0.65
FANCA-218ENST00000565582 A2MP01023 1474 aa19.09■□□□□ 0.65
FANCA-218ENST00000565582 MBD5Q9P267 1494 aa19.09■□□□□ 0.65
FANCA-218ENST00000565582 VPS8Q8N3P4 1428 aa19.08■□□□□ 0.64
FANCA-218ENST00000565582 CNTLNQ9NXG0 1405 aa19.08■□□□□ 0.64
FANCA-218ENST00000565582 FBXO41Q8TF61 875 aa19.07■□□□□ 0.64
FANCA-218ENST00000565582 CLTCQ00610 1675 aaKnown RBP19.07■□□□□ 0.64
FANCA-218ENST00000565582 MROH2AA6NES4 1674 aa19.06■□□□□ 0.64
FANCA-218ENST00000565582 ADGBQ8N7X0 1667 aa19.06■□□□□ 0.64
FANCA-218ENST00000565582 CAMSAP2Q08AD1 1489 aa19.06■□□□□ 0.64
FANCA-218ENST00000565582 STRCQ7RTU9 1775 aa19.06■□□□□ 0.64
FANCA-218ENST00000565582 CCDC141Q6ZP82 1450 aa19.03■□□□□ 0.64
FANCA-218ENST00000565582 LRRC9Q6ZRR7 1453 aa19.02■□□□□ 0.63
FANCA-218ENST00000565582 GGT6Q6P531 493 aa19■□□□□ 0.63
FANCA-218ENST00000565582 SETD1BQ9UPS6 1966 aaKnown RBP19■□□□□ 0.63
FANCA-218ENST00000565582 ZMYM3Q14202 1370 aa18.99■□□□□ 0.63
FANCA-218ENST00000565582 MYO3AQ8NEV4 1616 aa18.98■□□□□ 0.63
FANCA-218ENST00000565582 RTEL1-TNFRSF6BF6WH68 1400 aa18.98■□□□□ 0.63
FANCA-218ENST00000565582 NPATQ14207 1427 aa18.98■□□□□ 0.63
FANCA-218ENST00000565582 KANK4Q5T7N3 995 aaPredicted RBP18.96■□□□□ 0.63
FANCA-218ENST00000565582 ARHGEF5Q12774 1597 aa18.95■□□□□ 0.62
FANCA-218ENST00000565582 CERKQ8TCT0 537 aa18.95■□□□□ 0.62
FANCA-218ENST00000565582 PTPRKQ15262 1439 aa18.94■□□□□ 0.62
FANCA-218ENST00000565582 NCOA1Q15788 1441 aa18.94■□□□□ 0.62
FANCA-218ENST00000565582 CAMSAP1Q5T5Y3 1602 aa18.94■□□□□ 0.62
FANCA-218ENST00000565582 DHX29Q7Z478 1369 aaKnown RBP18.93■□□□□ 0.62
FANCA-218ENST00000565582 ZNF142P52746 1687 aaPredicted RBP18.92■□□□□ 0.62
FANCA-218ENST00000565582 MAP3K1Q13233 1512 aa18.91■□□□□ 0.62
FANCA-218ENST00000565582 CEP170BQ9Y4F5 1589 aaPredicted RBP18.91■□□□□ 0.62
FANCA-218ENST00000565582 KIF3BO15066 747 aa18.9■□□□□ 0.62
FANCA-218ENST00000565582 DMRT2Q9Y5R5 561 aa18.9■□□□□ 0.62
FANCA-218ENST00000565582 PTPRTO14522 1441 aa18.9■□□□□ 0.62
FANCA-218ENST00000565582 KDM5DQ9BY66 1539 aa18.89■□□□□ 0.61
FANCA-218ENST00000565582 MYOM3Q5VTT5 1437 aa18.88■□□□□ 0.61
FANCA-218ENST00000565582 MAST1Q9Y2H9 1570 aa18.86■□□□□ 0.61
FANCA-218ENST00000565582 NCKAP5LQ9HCH0 1330 aa18.85■□□□□ 0.61
FANCA-218ENST00000565582 RSPH4AQ5TD94 716 aa18.85■□□□□ 0.61
FANCA-218ENST00000565582 TSPY4P0CV99 314 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms