RNA–Protein interactions for RNA: ENST00000565296.5

CCNDBP1-206, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-206ENST00000565296 EFCAB2Q5VUJ9 269 aa21.63■■□□□ 1.05
CCNDBP1-206ENST00000565296 ARHGAP5Q13017 1502 aa21.63■■□□□ 1.05
CCNDBP1-206ENST00000565296 CDC42BPAQ5VT25 1732 aa21.63■■□□□ 1.05
CCNDBP1-206ENST00000565296 AKNAQ7Z591 1439 aa21.62■■□□□ 1.05
CCNDBP1-206ENST00000565296 CDC42BPBQ9Y5S2 1711 aa21.62■■□□□ 1.05
CCNDBP1-206ENST00000565296 PHLDB1Q86UU1 1377 aa21.61■■□□□ 1.05
CCNDBP1-206ENST00000565296 PPARGC1BQ86YN6 1023 aaKnown RBP21.61■■□□□ 1.05
CCNDBP1-206ENST00000565296 CFDP1Q9UEE9 299 aaPredicted RBP21.59■■□□□ 1.05
CCNDBP1-206ENST00000565296 KDM6BO15054 1643 aa21.57■■□□□ 1.04
CCNDBP1-206ENST00000565296 CFAP74Q9C0B2 1584 aa21.56■■□□□ 1.04
CCNDBP1-206ENST00000565296 ADGRL1O94910 1474 aa21.55■■□□□ 1.04
CCNDBP1-206ENST00000565296 ZNF644Q9H582 1327 aaPredicted RBP21.55■■□□□ 1.04
CCNDBP1-206ENST00000565296 ZNF777Q9ULD5 760 aaPredicted RBP21.55■■□□□ 1.04
CCNDBP1-206ENST00000565296 MYOM3Q5VTT5 1437 aa21.54■■□□□ 1.04
CCNDBP1-206ENST00000565296 RAPGEF3O95398 923 aa21.54■■□□□ 1.04
CCNDBP1-206ENST00000565296 SCAPERQ9BY12 1400 aa21.53■■□□□ 1.04
CCNDBP1-206ENST00000565296 SAMD9LQ8IVG5 1584 aa21.53■■□□□ 1.04
CCNDBP1-206ENST00000565296 ARHGEF12Q9NZN5 1544 aa21.52■■□□□ 1.04
CCNDBP1-206ENST00000565296 ITSN2Q9NZM3 1697 aa21.52■■□□□ 1.04
CCNDBP1-206ENST00000565296 ABCC1P33527 1531 aa21.51■■□□□ 1.03
CCNDBP1-206ENST00000565296 DENND4BO75064 1496 aaPredicted RBP21.5■■□□□ 1.03
CCNDBP1-206ENST00000565296 FRMPD1Q5SYB0 1578 aa21.49■■□□□ 1.03
CCNDBP1-206ENST00000565296 MIA2Q96PC5 1412 aa21.48■■□□□ 1.03
CCNDBP1-206ENST00000565296 POGZQ7Z3K3 1410 aa21.48■■□□□ 1.03
CCNDBP1-206ENST00000565296 KIAA1107Q9UPP5 1409 aa21.47■■□□□ 1.03
CCNDBP1-206ENST00000565296 TRAPPC8Q9Y2L5 1435 aa21.47■■□□□ 1.03
CCNDBP1-206ENST00000565296 HNRNPMP52272 730 aaKnown RBP eCLIP21.46■■□□□ 1.03
CCNDBP1-206ENST00000565296 AFAP1Q8N556 730 aa21.46■■□□□ 1.03
CCNDBP1-206ENST00000565296 CAMSAP2Q08AD1 1489 aa21.46■■□□□ 1.03
CCNDBP1-206ENST00000565296 SYCP2Q9BX26 1530 aa21.45■■□□□ 1.02
CCNDBP1-206ENST00000565296 FGD6Q6ZV73 1430 aa21.45■■□□□ 1.02
CCNDBP1-206ENST00000565296 PLEKHH2Q8IVE3 1493 aa21.44■■□□□ 1.02
CCNDBP1-206ENST00000565296 MBD5Q9P267 1494 aa21.44■■□□□ 1.02
CCNDBP1-206ENST00000565296 RICTORQ6R327 1708 aa21.44■■□□□ 1.02
CCNDBP1-206ENST00000565296 ZNF518AQ6AHZ1 1483 aa21.42■■□□□ 1.02
CCNDBP1-206ENST00000565296 TCOF1Q13428 1488 aaKnown RBP21.39■■□□□ 1.01
CCNDBP1-206ENST00000565296 KDM5CP41229 1560 aa21.39■■□□□ 1.01
CCNDBP1-206ENST00000565296 ZMYM4Q5VZL5 1548 aa21.38■■□□□ 1.01
CCNDBP1-206ENST00000565296 PTPN23Q9H3S7 1636 aa21.38■■□□□ 1.01
CCNDBP1-206ENST00000565296 YEATS2Q9ULM3 1422 aa21.35■■□□□ 1.01
CCNDBP1-206ENST00000565296 MAGI2Q86UL8 1455 aa21.34■■□□□ 1.01
CCNDBP1-206ENST00000565296 MLH3Q9UHC1 1453 aa21.34■■□□□ 1.01
CCNDBP1-206ENST00000565296 ARHGEF5Q12774 1597 aa21.33■■□□□ 1.01
CCNDBP1-206ENST00000565296 CCDC141Q6ZP82 1450 aa21.33■■□□□ 1.01
CCNDBP1-206ENST00000565296 RSPH4AQ5TD94 716 aa21.32■■□□□ 1
CCNDBP1-206ENST00000565296 SPAG9O60271 1321 aaKnown RBP21.32■■□□□ 1
CCNDBP1-206ENST00000565296 FAM50AQ14320 339 aaKnown RBP21.32■■□□□ 1
CCNDBP1-206ENST00000565296 HECW2Q9P2P5 1572 aa21.3■■□□□ 1
CCNDBP1-206ENST00000565296 ABCC5O15440 1437 aa21.3■■□□□ 1
CCNDBP1-206ENST00000565296 RRBP1Q9P2E9 1410 aaKnown RBP21.3■■□□□ 1
CCNDBP1-206ENST00000565296 ZFYVE16Q7Z3T8 1539 aa21.3■■□□□ 1
CCNDBP1-206ENST00000565296 ARHGEF40Q8TER5 1519 aa21.28■■□□□ 1
CCNDBP1-206ENST00000565296 DAPK1P53355 1430 aa21.27■□□□□ 0.99
CCNDBP1-206ENST00000565296 INO80Q9ULG1 1556 aaPredicted RBP21.27■□□□□ 0.99
CCNDBP1-206ENST00000565296 KIDINS220Q9ULH0 1771 aa21.26■□□□□ 0.99
CCNDBP1-206ENST00000565296 MYT1LQ9UL68 1186 aa21.26■□□□□ 0.99
CCNDBP1-206ENST00000565296 ATP7AQ04656 1500 aa21.26■□□□□ 0.99
CCNDBP1-206ENST00000565296 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.26■□□□□ 0.99
CCNDBP1-206ENST00000565296 RTEL1-TNFRSF6BF6WH68 1400 aa21.25■□□□□ 0.99
CCNDBP1-206ENST00000565296 TSPY4P0CV99 314 aa21.25■□□□□ 0.99
CCNDBP1-206ENST00000565296 TSPY10P0CW01 314 aa21.25■□□□□ 0.99
CCNDBP1-206ENST00000565296 DNMT1P26358 1616 aaKnown RBP21.24■□□□□ 0.99
CCNDBP1-206ENST00000565296 DIP2CQ9Y2E4 1556 aa21.24■□□□□ 0.99
CCNDBP1-206ENST00000565296 C9orf84Q5VXU9 1444 aa21.23■□□□□ 0.99
CCNDBP1-206ENST00000565296 ABCA6Q8N139 1617 aa21.23■□□□□ 0.99
CCNDBP1-206ENST00000565296 ATP10AO60312 1499 aa21.23■□□□□ 0.99
CCNDBP1-206ENST00000565296 PTPRKQ15262 1439 aa21.22■□□□□ 0.99
CCNDBP1-206ENST00000565296 SHANK2Q9UPX8 1470 aa21.21■□□□□ 0.99
CCNDBP1-206ENST00000565296 MAST1Q9Y2H9 1570 aa21.2■□□□□ 0.98
CCNDBP1-206ENST00000565296 SIGLEC1Q9BZZ2 1709 aa21.18■□□□□ 0.98
CCNDBP1-206ENST00000565296 CROCC2H7BZ55 1655 aa21.18■□□□□ 0.98
CCNDBP1-206ENST00000565296 CHIC2Q9UKJ5 165 aa21.18■□□□□ 0.98
CCNDBP1-206ENST00000565296 ITGAEP38570 1179 aa21.15■□□□□ 0.98
CCNDBP1-206ENST00000565296 REREQ9P2R6 1566 aa21.15■□□□□ 0.98
CCNDBP1-206ENST00000565296 A2MP01023 1474 aa21.14■□□□□ 0.98
CCNDBP1-206ENST00000565296 NCOA1Q15788 1441 aa21.13■□□□□ 0.97
CCNDBP1-206ENST00000565296 PLXNC1O60486 1568 aa21.12■□□□□ 0.97
CCNDBP1-206ENST00000565296 RRP7BPQ9NSQ0 103 aa21.12■□□□□ 0.97
CCNDBP1-206ENST00000565296 DHX29Q7Z478 1369 aaKnown RBP21.12■□□□□ 0.97
CCNDBP1-206ENST00000565296 ADGRL2O95490 1459 aa21.12■□□□□ 0.97
CCNDBP1-206ENST00000565296 ARID4BQ4LE39 1312 aaPredicted RBP21.12■□□□□ 0.97
CCNDBP1-206ENST00000565296 KIF15Q9NS87 1388 aa21.11■□□□□ 0.97
CCNDBP1-206ENST00000565296 ADGBQ8N7X0 1667 aa21.1■□□□□ 0.97
CCNDBP1-206ENST00000565296 ANKRD30AQ9BXX3 1397 aa21.1■□□□□ 0.97
CCNDBP1-206ENST00000565296 AGLP35573 1532 aa21.1■□□□□ 0.97
CCNDBP1-206ENST00000565296 ROCK1Q13464 1354 aa21.07■□□□□ 0.96
CCNDBP1-206ENST00000565296 KDM4FA0A1W2PPD8 638 aa21.06■□□□□ 0.96
CCNDBP1-206ENST00000565296 DUOX2Q9NRD8 1548 aa21.05■□□□□ 0.96
CCNDBP1-206ENST00000565296 MLECQ14165 292 aa21.04■□□□□ 0.96
CCNDBP1-206ENST00000565296 BCORL1Q5H9F3 1711 aa21.02■□□□□ 0.95
CCNDBP1-206ENST00000565296 KIF3BO15066 747 aa21.01■□□□□ 0.95
CCNDBP1-206ENST00000565296 ERBINQ96RT1 1412 aa21■□□□□ 0.95
CCNDBP1-206ENST00000565296 ADAMTSL3P82987 1691 aa20.98■□□□□ 0.95
CCNDBP1-206ENST00000565296 GGT6Q6P531 493 aa20.98■□□□□ 0.95
CCNDBP1-206ENST00000565296 ANKRD50Q9ULJ7 1429 aa20.98■□□□□ 0.95
CCNDBP1-206ENST00000565296 NAIPQ13075 1403 aa20.96■□□□□ 0.95
CCNDBP1-206ENST00000565296 EIF2AK4Q9P2K8 1649 aaKnown RBP20.95■□□□□ 0.94
CCNDBP1-206ENST00000565296 MADDQ8WXG6 1647 aa20.95■□□□□ 0.94
CCNDBP1-206ENST00000565296 HFM1A2PYH4 1435 aa20.94■□□□□ 0.94
CCNDBP1-206ENST00000565296 RNF17Q9BXT8 1623 aaKnown RBP20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms