RNA–Protein interactions for RNA: ENST00000564890.1

PKD1-229, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 574 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-229ENST00000564890 CDC42BPBQ9Y5S2 1711 aa29.4■■■□□ 2.3
PKD1-229ENST00000564890 FRMPD1Q5SYB0 1578 aa29.4■■■□□ 2.3
PKD1-229ENST00000564890 CDC42BPAQ5VT25 1732 aa29.38■■■□□ 2.29
PKD1-229ENST00000564890 SCAPERQ9BY12 1400 aa29.37■■■□□ 2.29
PKD1-229ENST00000564890 GPATCH8Q9UKJ3 1502 aaKnown RBP29.35■■■□□ 2.29
PKD1-229ENST00000564890 RICTORQ6R327 1708 aa29.35■■■□□ 2.29
PKD1-229ENST00000564890 CCNB3Q8WWL7 1395 aa29.35■■■□□ 2.29
PKD1-229ENST00000564890 MAP3K1Q13233 1512 aa29.34■■■□□ 2.29
PKD1-229ENST00000564890 LRRC9Q6ZRR7 1453 aa29.31■■■□□ 2.28
PKD1-229ENST00000564890 POGZQ7Z3K3 1410 aa29.31■■■□□ 2.28
PKD1-229ENST00000564890 SUPT6HQ7KZ85 1726 aaKnown RBP29.28■■■□□ 2.28
PKD1-229ENST00000564890 APLP2Q06481 763 aa29.28■■■□□ 2.28
PKD1-229ENST00000564890 CFDP1Q9UEE9 299 aaPredicted RBP29.27■■■□□ 2.28
PKD1-229ENST00000564890 ZNF777Q9ULD5 760 aaPredicted RBP29.27■■■□□ 2.28
PKD1-229ENST00000564890 NCOA2Q15596 1464 aa29.27■■■□□ 2.28
PKD1-229ENST00000564890 ZMYM4Q5VZL5 1548 aa29.26■■■□□ 2.27
PKD1-229ENST00000564890 KANK4Q5T7N3 995 aaPredicted RBP29.26■■■□□ 2.27
PKD1-229ENST00000564890 ABCC1P33527 1531 aa29.25■■■□□ 2.27
PKD1-229ENST00000564890 ZNF518AQ6AHZ1 1483 aa29.23■■■□□ 2.27
PKD1-229ENST00000564890 SAMD9LQ8IVG5 1584 aa29.22■■■□□ 2.27
PKD1-229ENST00000564890 ITSN2Q9NZM3 1697 aa29.21■■■□□ 2.27
PKD1-229ENST00000564890 ARHGEF12Q9NZN5 1544 aa29.21■■■□□ 2.27
PKD1-229ENST00000564890 ARHGEF40Q8TER5 1519 aa29.2■■■□□ 2.27
PKD1-229ENST00000564890 AFAP1Q8N556 730 aa29.2■■■□□ 2.26
PKD1-229ENST00000564890 MAGI2Q86UL8 1455 aa29.19■■■□□ 2.26
PKD1-229ENST00000564890 ZFYVE16Q7Z3T8 1539 aa29.19■■■□□ 2.26
PKD1-229ENST00000564890 KDM4FA0A1W2PPD8 638 aa29.18■■■□□ 2.26
PKD1-229ENST00000564890 TRAPPC8Q9Y2L5 1435 aa29.18■■■□□ 2.26
PKD1-229ENST00000564890 YEATS2Q9ULM3 1422 aa29.17■■■□□ 2.26
PKD1-229ENST00000564890 KDM5CP41229 1560 aa29.17■■■□□ 2.26
PKD1-229ENST00000564890 SYCP2Q9BX26 1530 aa29.15■■■□□ 2.26
PKD1-229ENST00000564890 AEBP2Q6ZN18 517 aaPredicted RBP29.15■■■□□ 2.26
PKD1-229ENST00000564890 PLEKHH2Q8IVE3 1493 aa29.15■■■□□ 2.26
PKD1-229ENST00000564890 KIAA1107Q9UPP5 1409 aa29.12■■■□□ 2.25
PKD1-229ENST00000564890 HNRNPMP52272 730 aaKnown RBP eCLIP29.12■■■□□ 2.25
PKD1-229ENST00000564890 ZNF644Q9H582 1327 aaPredicted RBP29.12■■■□□ 2.25
PKD1-229ENST00000564890 MYT1LQ9UL68 1186 aa29.1■■■□□ 2.25
PKD1-229ENST00000564890 HECW2Q9P2P5 1572 aa29.09■■■□□ 2.25
PKD1-229ENST00000564890 ARID4BQ4LE39 1312 aaPredicted RBP29.07■■■□□ 2.24
PKD1-229ENST00000564890 MLH3Q9UHC1 1453 aa29.07■■■□□ 2.24
PKD1-229ENST00000564890 ATP10AO60312 1499 aa29.04■■■□□ 2.24
PKD1-229ENST00000564890 CAMSAP2Q08AD1 1489 aa29.04■■■□□ 2.24
PKD1-229ENST00000564890 MYOM3Q5VTT5 1437 aa29.03■■■□□ 2.24
PKD1-229ENST00000564890 C9orf84Q5VXU9 1444 aa29.02■■■□□ 2.24
PKD1-229ENST00000564890 SPAG9O60271 1321 aaKnown RBP29.01■■■□□ 2.23
PKD1-229ENST00000564890 MBD5Q9P267 1494 aa29.01■■■□□ 2.23
PKD1-229ENST00000564890 DIP2CQ9Y2E4 1556 aa29■■■□□ 2.23
PKD1-229ENST00000564890 KIDINS220Q9ULH0 1771 aa28.98■■■□□ 2.23
PKD1-229ENST00000564890 ABCA6Q8N139 1617 aa28.98■■■□□ 2.23
PKD1-229ENST00000564890 SIGLEC1Q9BZZ2 1709 aa28.98■■■□□ 2.23
PKD1-229ENST00000564890 MIA2Q96PC5 1412 aa28.97■■■□□ 2.23
PKD1-229ENST00000564890 BCORL1Q5H9F3 1711 aa28.96■■■□□ 2.23
PKD1-229ENST00000564890 ATP7AQ04656 1500 aa28.94■■■□□ 2.22
PKD1-229ENST00000564890 INO80Q9ULG1 1556 aaPredicted RBP28.92■■■□□ 2.22
PKD1-229ENST00000564890 CCDC141Q6ZP82 1450 aa28.92■■■□□ 2.22
PKD1-229ENST00000564890 ADAMTSL3P82987 1691 aa28.92■■■□□ 2.22
PKD1-229ENST00000564890 REREQ9P2R6 1566 aa28.91■■■□□ 2.22
PKD1-229ENST00000564890 RSPH4AQ5TD94 716 aa28.9■■■□□ 2.22
PKD1-229ENST00000564890 ARHGEF5Q12774 1597 aa28.89■■■□□ 2.22
PKD1-229ENST00000564890 MLECQ14165 292 aa28.88■■■□□ 2.21
PKD1-229ENST00000564890 FGD6Q6ZV73 1430 aa28.86■■■□□ 2.21
PKD1-229ENST00000564890 RTEL1-TNFRSF6BF6WH68 1400 aa28.86■■■□□ 2.21
PKD1-229ENST00000564890 MADDQ8WXG6 1647 aa28.85■■■□□ 2.21
PKD1-229ENST00000564890 PTPN23Q9H3S7 1636 aa28.85■■■□□ 2.21
PKD1-229ENST00000564890 AGLP35573 1532 aa28.82■■■□□ 2.2
PKD1-229ENST00000564890 TSPY4P0CV99 314 aa28.81■■■□□ 2.2
PKD1-229ENST00000564890 TSPY10P0CW01 314 aa28.81■■■□□ 2.2
PKD1-229ENST00000564890 PPARGC1BQ86YN6 1023 aaKnown RBP28.8■■■□□ 2.2
PKD1-229ENST00000564890 A2MP01023 1474 aa28.79■■■□□ 2.2
PKD1-229ENST00000564890 TCOF1Q13428 1488 aaKnown RBP28.79■■■□□ 2.2
PKD1-229ENST00000564890 PTPRMP28827 1452 aa28.78■■■□□ 2.2
PKD1-229ENST00000564890 RIMS1Q86UR5 1692 aaKnown RBP28.77■■■□□ 2.2
PKD1-229ENST00000564890 ADGBQ8N7X0 1667 aa28.77■■■□□ 2.2
PKD1-229ENST00000564890 PLXNC1O60486 1568 aa28.75■■■□□ 2.19
PKD1-229ENST00000564890 FER1L4A9Z1Z3 1794 aa28.74■■■□□ 2.19
PKD1-229ENST00000564890 MAST1Q9Y2H9 1570 aa28.73■■■□□ 2.19
PKD1-229ENST00000564890 ABCC5O15440 1437 aa28.71■■■□□ 2.19
PKD1-229ENST00000564890 DHX29Q7Z478 1369 aaKnown RBP28.7■■■□□ 2.18
PKD1-229ENST00000564890 FAM50AQ14320 339 aaKnown RBP28.69■■■□□ 2.18
PKD1-229ENST00000564890 DAPK1P53355 1430 aa28.69■■■□□ 2.18
PKD1-229ENST00000564890 DNMT1P26358 1616 aaKnown RBP28.68■■■□□ 2.18
PKD1-229ENST00000564890 CROCC2H7BZ55 1655 aa28.67■■■□□ 2.18
PKD1-229ENST00000564890 SHANK2Q9UPX8 1470 aa28.67■■■□□ 2.18
PKD1-229ENST00000564890 PLPPR3Q6T4P5 718 aa28.64■■■□□ 2.18
PKD1-229ENST00000564890 ESF1Q9H501 851 aaKnown RBP28.63■■■□□ 2.17
PKD1-229ENST00000564890 GGT6Q6P531 493 aa28.61■■■□□ 2.17
PKD1-229ENST00000564890 KIF3BO15066 747 aa28.59■■■□□ 2.17
PKD1-229ENST00000564890 CHIC2Q9UKJ5 165 aa28.57■■■□□ 2.16
PKD1-229ENST00000564890 CNTLNQ9NXG0 1405 aa28.57■■■□□ 2.16
PKD1-229ENST00000564890 CEBPAP49715 358 aaPredicted RBP28.56■■■□□ 2.16
PKD1-229ENST00000564890 KIF15Q9NS87 1388 aa28.56■■■□□ 2.16
PKD1-229ENST00000564890 RRP7BPQ9NSQ0 103 aa28.55■■■□□ 2.16
PKD1-229ENST00000564890 DUOX2Q9NRD8 1548 aa28.53■■■□□ 2.16
PKD1-229ENST00000564890 ANKRD30AQ9BXX3 1397 aa28.53■■■□□ 2.16
PKD1-229ENST00000564890 PPP6R1Q9UPN7 881 aa28.52■■■□□ 2.16
PKD1-229ENST00000564890 C3P01024 1663 aa28.49■■■□□ 2.15
PKD1-229ENST00000564890 CLTCQ00610 1675 aaKnown RBP28.49■■■□□ 2.15
PKD1-229ENST00000564890 MROH2AA6NES4 1674 aa28.48■■■□□ 2.15
PKD1-229ENST00000564890 ADGRL2O95490 1459 aa28.48■■■□□ 2.15
PKD1-229ENST00000564890 EIF2AK4Q9P2K8 1649 aaKnown RBP28.48■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms