RNA–Protein interactions for RNA: ENST00000564850.1

RBFOX1-216, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 3

Gene RBFOX1, Length 293 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-216ENST00000564850 EFCAB3Q8N7B9 438 aa11.16□□□□□ -0.62
RBFOX1-216ENST00000564850 RGS20O76081 388 aa11.14□□□□□ -0.63
RBFOX1-216ENST00000564850 FBXO3Q9UK99 471 aa11.14□□□□□ -0.63
RBFOX1-216ENST00000564850 ADGRD1Q6QNK2 874 aa11.12□□□□□ -0.63
RBFOX1-216ENST00000564850 POTEEQ6S8J3 1075 aa11.12□□□□□ -0.63
RBFOX1-216ENST00000564850 NUDT7P0C024 238 aa11.08□□□□□ -0.64
RBFOX1-216ENST00000564850 FKBP8Q14318 412 aa11.07□□□□□ -0.64
RBFOX1-216ENST00000564850 KCTD12Q96CX2 325 aaKnown RBP11.05□□□□□ -0.64
RBFOX1-216ENST00000564850 LHX6Q9UPM6 363 aa11.05□□□□□ -0.64
RBFOX1-216ENST00000564850 CIZ1Q9ULV3 898 aaPredicted RBP11.04□□□□□ -0.64
RBFOX1-216ENST00000564850 ARHGAP33O14559 1287 aa11.02□□□□□ -0.65
RBFOX1-216ENST00000564850 VASPP50552 380 aaPredicted RBP11.01□□□□□ -0.65
RBFOX1-216ENST00000564850 SOX12O15370 315 aa10.99□□□□□ -0.65
RBFOX1-216ENST00000564850 MS4A4AQ96JQ5 239 aa10.99□□□□□ -0.65
RBFOX1-216ENST00000564850 TK2O00142 265 aa10.98□□□□□ -0.65
RBFOX1-216ENST00000564850 STAC3Q96MF2 364 aa10.98□□□□□ -0.65
RBFOX1-216ENST00000564850 HRO43593 1189 aa10.97□□□□□ -0.65
RBFOX1-216ENST00000564850 IFFO2Q5TF58 517 aa10.95□□□□□ -0.66
RBFOX1-216ENST00000564850 A0A0G2JS52 829 aa10.94□□□□□ -0.66
RBFOX1-216ENST00000564850 Q6ZNB5 142 aa10.94□□□□□ -0.66
RBFOX1-216ENST00000564850 PCDHGA4Q9Y5G9 962 aa10.93□□□□□ -0.66
RBFOX1-216ENST00000564850 PTPN5P54829 565 aa10.92□□□□□ -0.66
RBFOX1-216ENST00000564850 PHF8Q9UPP1 1060 aa10.92□□□□□ -0.66
RBFOX1-216ENST00000564850 PSDA5PKW4 1024 aaPredicted RBP10.91□□□□□ -0.66
RBFOX1-216ENST00000564850 DMRTA1Q5VZB9 504 aa10.9□□□□□ -0.66
RBFOX1-216ENST00000564850 SPOCK2Q92563 424 aa10.9□□□□□ -0.66
RBFOX1-216ENST00000564850 PSEN2P49810 448 aa10.87□□□□□ -0.67
RBFOX1-216ENST00000564850 SLC34A2O95436 690 aa10.86□□□□□ -0.67
RBFOX1-216ENST00000564850 C2orf72A6NCS6 295 aa10.85□□□□□ -0.67
RBFOX1-216ENST00000564850 KIF3CO14782 793 aa10.83□□□□□ -0.68
RBFOX1-216ENST00000564850 TRIM41Q8WV44 630 aa10.8□□□□□ -0.68
RBFOX1-216ENST00000564850 NLRP6P59044 892 aa10.78□□□□□ -0.68
RBFOX1-216ENST00000564850 KCNH8Q96L42 1107 aa10.77□□□□□ -0.69
RBFOX1-216ENST00000564850 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.75□□□□□ -0.69
RBFOX1-216ENST00000564850 PPP4R3BQ5MIZ7 849 aa10.75□□□□□ -0.69
RBFOX1-216ENST00000564850 ZFP91Q96JP5 570 aaPredicted RBP10.75□□□□□ -0.69
RBFOX1-216ENST00000564850 THSD4Q6ZMP0 1018 aa10.74□□□□□ -0.69
RBFOX1-216ENST00000564850 KCNK17Q96T54 332 aa10.72□□□□□ -0.69
RBFOX1-216ENST00000564850 RIOK3O14730 519 aaKnown RBP10.71□□□□□ -0.69
RBFOX1-216ENST00000564850 TMC2Q8TDI7 906 aa10.71□□□□□ -0.69
RBFOX1-216ENST00000564850 IFNLR1Q8IU57 520 aaPredicted RBP10.7□□□□□ -0.7
RBFOX1-216ENST00000564850 FBXO22Q8NEZ5 403 aa10.7□□□□□ -0.7
RBFOX1-216ENST00000564850 VPS9D1Q9Y2B5 631 aa10.7□□□□□ -0.7
RBFOX1-216ENST00000564850 GOLGA8CPA6NN73 597 aa10.68□□□□□ -0.7
RBFOX1-216ENST00000564850 VGFO15240 615 aaPredicted RBP10.68□□□□□ -0.7
RBFOX1-216ENST00000564850 KDM4FA0A1W2PPD8 638 aa10.67□□□□□ -0.7
RBFOX1-216ENST00000564850 LAPTM4AQ15012 233 aa10.67□□□□□ -0.7
RBFOX1-216ENST00000564850 WNT2BQ93097 391 aa10.65□□□□□ -0.7
RBFOX1-216ENST00000564850 TRAF7Q6Q0C0 670 aa10.64□□□□□ -0.71
RBFOX1-216ENST00000564850 RNF25Q96BH1 459 aaPredicted RBP10.61□□□□□ -0.71
RBFOX1-216ENST00000564850 LCE2BO14633 110 aa10.6□□□□□ -0.71
RBFOX1-216ENST00000564850 PTCD2Q8WV60 388 aaKnown RBP10.6□□□□□ -0.71
RBFOX1-216ENST00000564850 MRPL50Q8N5N7 158 aaKnown RBP10.58□□□□□ -0.72
RBFOX1-216ENST00000564850 SLC4A5Q9BY07 1137 aa10.58□□□□□ -0.72
RBFOX1-216ENST00000564850 ITGBL1O95965 494 aaPredicted RBP10.57□□□□□ -0.72
RBFOX1-216ENST00000564850 MFRPQ9BY79 579 aa10.57□□□□□ -0.72
RBFOX1-216ENST00000564850 BHMG1C9JSJ3 638 aaPredicted RBP10.56□□□□□ -0.72
RBFOX1-216ENST00000564850 GFRA3O60609 400 aa10.54□□□□□ -0.72
RBFOX1-216ENST00000564850 BCL11BQ9C0K0 894 aaPredicted RBP10.54□□□□□ -0.72
RBFOX1-216ENST00000564850 TBC1D12O60347 775 aa10.52□□□□□ -0.73
RBFOX1-216ENST00000564850 NBPF3Q9H094 633 aa10.5□□□□□ -0.73
RBFOX1-216ENST00000564850 STK24Q9Y6E0 443 aa10.5□□□□□ -0.73
RBFOX1-216ENST00000564850 ZNF787Q6DD87 383 aa10.47□□□□□ -0.73
RBFOX1-216ENST00000564850 BCL2L12Q9HB09 334 aa10.47□□□□□ -0.73
RBFOX1-216ENST00000564850 ZNF454Q8N9F8 522 aa10.46□□□□□ -0.73
RBFOX1-216ENST00000564850 ZBED2Q9BTP6 218 aa10.46□□□□□ -0.73
RBFOX1-216ENST00000564850 TAOK2Q9UL54 1235 aa10.46□□□□□ -0.73
RBFOX1-216ENST00000564850 PTPREP23469 700 aa10.45□□□□□ -0.74
RBFOX1-216ENST00000564850 PLPP6Q8IY26 295 aa10.45□□□□□ -0.74
RBFOX1-216ENST00000564850 KCNC4Q03721 635 aa10.44□□□□□ -0.74
RBFOX1-216ENST00000564850 ANKK1Q8NFD2 765 aa10.43□□□□□ -0.74
RBFOX1-216ENST00000564850 NRG2O14511 850 aaPredicted RBP10.42□□□□□ -0.74
RBFOX1-216ENST00000564850 ZNF775Q96BV0 537 aaPredicted RBP10.42□□□□□ -0.74
RBFOX1-216ENST00000564850 FOXK1P85037 733 aa10.41□□□□□ -0.74
RBFOX1-216ENST00000564850 NYAP1Q6ZVC0 841 aa10.38□□□□□ -0.75
RBFOX1-216ENST00000564850 STK25O00506 426 aa10.36□□□□□ -0.75
RBFOX1-216ENST00000564850 BCAMP50895 628 aa10.36□□□□□ -0.75
RBFOX1-216ENST00000564850 FOSBP53539 338 aa10.32□□□□□ -0.76
RBFOX1-216ENST00000564850 SOWAHBA6NEL2 793 aa10.31□□□□□ -0.76
RBFOX1-216ENST00000564850 DSG2Q14126 1118 aa10.31□□□□□ -0.76
RBFOX1-216ENST00000564850 GPHNQ9NQX3 736 aaPredicted RBP10.31□□□□□ -0.76
RBFOX1-216ENST00000564850 PPP1R37O75864 691 aa10.3□□□□□ -0.76
RBFOX1-216ENST00000564850 PRKD2Q9BZL6 878 aa10.3□□□□□ -0.76
RBFOX1-216ENST00000564850 UPF1Q92900 1129 aaKnown RBP eCLIP10.29□□□□□ -0.76
RBFOX1-216ENST00000564850 WBP1LQ9NX94 342 aa10.28□□□□□ -0.76
RBFOX1-216ENST00000564850 OXER1Q8TDS5 423 aa10.27□□□□□ -0.77
RBFOX1-216ENST00000564850 RABGEF1Q9UJ41 708 aa10.27□□□□□ -0.77
RBFOX1-216ENST00000564850 JPH4Q96JJ6 628 aa10.25□□□□□ -0.77
RBFOX1-216ENST00000564850 ZDHHC16Q969W1 377 aa10.24□□□□□ -0.77
RBFOX1-216ENST00000564850 ADAM33Q9BZ11 813 aa10.24□□□□□ -0.77
RBFOX1-216ENST00000564850 LAPTM4BQ86VI4 370 aa10.23□□□□□ -0.77
RBFOX1-216ENST00000564850 PDZRN3Q9UPQ7 1066 aa10.22□□□□□ -0.77
RBFOX1-216ENST00000564850 PPP1R3GB7ZBB8 358 aa10.21□□□□□ -0.77
RBFOX1-216ENST00000564850 PROX2Q3B8N5 592 aa10.21□□□□□ -0.77
RBFOX1-216ENST00000564850 ZFRQ96KR1 1074 aaKnown RBP10.21□□□□□ -0.77
RBFOX1-216ENST00000564850 V9GY48 417 aaPredicted RBP10.21□□□□□ -0.77
RBFOX1-216ENST00000564850 TSR3Q9UJK0 312 aaKnown RBP10.15□□□□□ -0.78
RBFOX1-216ENST00000564850 HPS5Q9UPZ3 1129 aa10.14□□□□□ -0.79
RBFOX1-216ENST00000564850 ANO8Q9HCE9 1232 aaPredicted RBP10.12□□□□□ -0.79
RBFOX1-216ENST00000564850 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms