RNA–Protein interactions for RNA: ENST00000564814.1

GINS3-205, Transcript of GINS complex subunit 3, humanhuman

TSL 4

Gene GINS3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-205ENST00000564814 TTC37Q6PGP7 1564 aa11.59□□□□□ -0.55
GINS3-205ENST00000564814 MYO5CQ9NQX4 1742 aa11.59□□□□□ -0.55
GINS3-205ENST00000564814 GPATCH8Q9UKJ3 1502 aaKnown RBP11.59□□□□□ -0.55
GINS3-205ENST00000564814 TCOF1Q13428 1488 aaKnown RBP11.58□□□□□ -0.56
GINS3-205ENST00000564814 PHLDB1Q86UU1 1377 aa11.58□□□□□ -0.56
GINS3-205ENST00000564814 MAP3K4Q9Y6R4 1608 aa11.58□□□□□ -0.56
GINS3-205ENST00000564814 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.57□□□□□ -0.56
GINS3-205ENST00000564814 HNRNPUL2Q1KMD3 747 aaKnown RBP11.57□□□□□ -0.56
GINS3-205ENST00000564814 FGD6Q6ZV73 1430 aa11.57□□□□□ -0.56
GINS3-205ENST00000564814 CDC42BPBQ9Y5S2 1711 aa11.57□□□□□ -0.56
GINS3-205ENST00000564814 PLCH2O75038 1416 aa11.56□□□□□ -0.56
GINS3-205ENST00000564814 DISP3Q9P2K9 1392 aa11.55□□□□□ -0.56
GINS3-205ENST00000564814 CCNB3Q8WWL7 1395 aa11.54□□□□□ -0.56
GINS3-205ENST00000564814 CFAP74Q9C0B2 1584 aa11.54□□□□□ -0.56
GINS3-205ENST00000564814 ARID3CA6NKF2 412 aa11.54□□□□□ -0.56
GINS3-205ENST00000564814 KDM6BO15054 1643 aa11.53□□□□□ -0.56
GINS3-205ENST00000564814 PTPN23Q9H3S7 1636 aa11.53□□□□□ -0.56
GINS3-205ENST00000564814 KIAA1107Q9UPP5 1409 aa11.52□□□□□ -0.56
GINS3-205ENST00000564814 PLEKHH2Q8IVE3 1493 aa11.52□□□□□ -0.56
GINS3-205ENST00000564814 NEO1Q92859 1461 aa11.51□□□□□ -0.57
GINS3-205ENST00000564814 ARHGEF5Q12774 1597 aa11.5□□□□□ -0.57
GINS3-205ENST00000564814 PPRC1Q5VV67 1664 aaKnown RBP11.5□□□□□ -0.57
GINS3-205ENST00000564814 PLPPR3Q6T4P5 718 aa11.5□□□□□ -0.57
GINS3-205ENST00000564814 CD109Q6YHK3 1445 aa11.5□□□□□ -0.57
GINS3-205ENST00000564814 SAMD9LQ8IVG5 1584 aa11.5□□□□□ -0.57
GINS3-205ENST00000564814 ABCC1P33527 1531 aa11.49□□□□□ -0.57
GINS3-205ENST00000564814 FANCAO15360 1455 aa11.48□□□□□ -0.57
GINS3-205ENST00000564814 CAMSAP2Q08AD1 1489 aa11.48□□□□□ -0.57
GINS3-205ENST00000564814 TEX14Q8IWB6 1497 aa11.48□□□□□ -0.57
GINS3-205ENST00000564814 ARHGAP5Q13017 1502 aa11.48□□□□□ -0.57
GINS3-205ENST00000564814 DNMT1P26358 1616 aaKnown RBP11.48□□□□□ -0.57
GINS3-205ENST00000564814 MBD5Q9P267 1494 aa11.47□□□□□ -0.57
GINS3-205ENST00000564814 SHANK2Q9UPX8 1470 aa11.47□□□□□ -0.57
GINS3-205ENST00000564814 TRIM26Q12899 539 aaPredicted RBP11.47□□□□□ -0.57
GINS3-205ENST00000564814 RSPH4AQ5TD94 716 aa11.47□□□□□ -0.57
GINS3-205ENST00000564814 CFDP1Q9UEE9 299 aaPredicted RBP11.47□□□□□ -0.57
GINS3-205ENST00000564814 SPATA31D1Q6ZQQ2 1576 aa11.46□□□□□ -0.57
GINS3-205ENST00000564814 EFCAB2Q5VUJ9 269 aa11.46□□□□□ -0.57
GINS3-205ENST00000564814 KCNH8Q96L42 1107 aa11.46□□□□□ -0.57
GINS3-205ENST00000564814 CROCC2H7BZ55 1655 aa11.46□□□□□ -0.58
GINS3-205ENST00000564814 MAST1Q9Y2H9 1570 aa11.45□□□□□ -0.58
GINS3-205ENST00000564814 AKNAQ7Z591 1439 aa11.45□□□□□ -0.58
GINS3-205ENST00000564814 ADGRL1O94910 1474 aa11.44□□□□□ -0.58
GINS3-205ENST00000564814 KDM5CP41229 1560 aa11.43□□□□□ -0.58
GINS3-205ENST00000564814 PPARGC1BQ86YN6 1023 aaKnown RBP11.43□□□□□ -0.58
GINS3-205ENST00000564814 ADGRL2O95490 1459 aa11.43□□□□□ -0.58
GINS3-205ENST00000564814 CCDC141Q6ZP82 1450 aa11.43□□□□□ -0.58
GINS3-205ENST00000564814 SYCP2Q9BX26 1530 aa11.42□□□□□ -0.58
GINS3-205ENST00000564814 DAPK1P53355 1430 aa11.42□□□□□ -0.58
GINS3-205ENST00000564814 ARHGEF12Q9NZN5 1544 aa11.41□□□□□ -0.58
GINS3-205ENST00000564814 RTEL1-TNFRSF6BF6WH68 1400 aa11.41□□□□□ -0.58
GINS3-205ENST00000564814 ABCC5O15440 1437 aa11.41□□□□□ -0.58
GINS3-205ENST00000564814 ROCK1Q13464 1354 aa11.41□□□□□ -0.58
GINS3-205ENST00000564814 RICTORQ6R327 1708 aa11.4□□□□□ -0.58
GINS3-205ENST00000564814 ZNF518AQ6AHZ1 1483 aa11.4□□□□□ -0.58
GINS3-205ENST00000564814 ZMYM4Q5VZL5 1548 aa11.4□□□□□ -0.59
GINS3-205ENST00000564814 PLXNC1O60486 1568 aa11.39□□□□□ -0.59
GINS3-205ENST00000564814 POGZQ7Z3K3 1410 aa11.39□□□□□ -0.59
GINS3-205ENST00000564814 ADGBQ8N7X0 1667 aa11.39□□□□□ -0.59
GINS3-205ENST00000564814 INO80Q9ULG1 1556 aaPredicted RBP11.38□□□□□ -0.59
GINS3-205ENST00000564814 MLH3Q9UHC1 1453 aa11.38□□□□□ -0.59
GINS3-205ENST00000564814 ZNF644Q9H582 1327 aaPredicted RBP11.37□□□□□ -0.59
GINS3-205ENST00000564814 PTPRKQ15262 1439 aa11.37□□□□□ -0.59
GINS3-205ENST00000564814 SCAPERQ9BY12 1400 aa11.37□□□□□ -0.59
GINS3-205ENST00000564814 DENND4BO75064 1496 aaPredicted RBP11.37□□□□□ -0.59
GINS3-205ENST00000564814 MAGI2Q86UL8 1455 aa11.37□□□□□ -0.59
GINS3-205ENST00000564814 COL17A1Q9UMD9 1497 aaPredicted RBP11.37□□□□□ -0.59
GINS3-205ENST00000564814 FRMPD1Q5SYB0 1578 aa11.37□□□□□ -0.59
GINS3-205ENST00000564814 GCC2Q8IWJ2 1684 aa11.36□□□□□ -0.59
GINS3-205ENST00000564814 HFM1A2PYH4 1435 aa11.36□□□□□ -0.59
GINS3-205ENST00000564814 ZFYVE16Q7Z3T8 1539 aa11.36□□□□□ -0.59
GINS3-205ENST00000564814 NCOA1Q15788 1441 aa11.35□□□□□ -0.59
GINS3-205ENST00000564814 C9orf84Q5VXU9 1444 aa11.35□□□□□ -0.59
GINS3-205ENST00000564814 TRAPPC8Q9Y2L5 1435 aa11.35□□□□□ -0.59
GINS3-205ENST00000564814 ACIN1Q9UKV3 1341 aaKnown RBP11.35□□□□□ -0.59
GINS3-205ENST00000564814 HRCP23327 699 aa11.34□□□□□ -0.59
GINS3-205ENST00000564814 FAM50AQ14320 339 aaKnown RBP11.34□□□□□ -0.59
GINS3-205ENST00000564814 PPP6R1Q9UPN7 881 aa11.34□□□□□ -0.59
GINS3-205ENST00000564814 KIDINS220Q9ULH0 1771 aa11.33□□□□□ -0.59
GINS3-205ENST00000564814 REREQ9P2R6 1566 aa11.33□□□□□ -0.6
GINS3-205ENST00000564814 ATP7AQ04656 1500 aa11.33□□□□□ -0.6
GINS3-205ENST00000564814 BCORL1Q5H9F3 1711 aa11.32□□□□□ -0.6
GINS3-205ENST00000564814 ANKRD30AQ9BXX3 1397 aa11.32□□□□□ -0.6
GINS3-205ENST00000564814 ZNF777Q9ULD5 760 aaPredicted RBP11.32□□□□□ -0.6
GINS3-205ENST00000564814 NAIPQ13075 1403 aa11.32□□□□□ -0.6
GINS3-205ENST00000564814 TSPY4P0CV99 314 aa11.31□□□□□ -0.6
GINS3-205ENST00000564814 TSPY10P0CW01 314 aa11.31□□□□□ -0.6
GINS3-205ENST00000564814 ADRA2BP18089 450 aa11.31□□□□□ -0.6
GINS3-205ENST00000564814 HNRNPMP52272 730 aaKnown RBP eCLIP11.31□□□□□ -0.6
GINS3-205ENST00000564814 DUOX2Q9NRD8 1548 aa11.3□□□□□ -0.6
GINS3-205ENST00000564814 EIF2AK4Q9P2K8 1649 aaKnown RBP11.3□□□□□ -0.6
GINS3-205ENST00000564814 ERBINQ96RT1 1412 aa11.29□□□□□ -0.6
GINS3-205ENST00000564814 ARHGEF40Q8TER5 1519 aa11.28□□□□□ -0.6
GINS3-205ENST00000564814 SPAG9O60271 1321 aaKnown RBP11.28□□□□□ -0.6
GINS3-205ENST00000564814 SETD5Q9C0A6 1442 aa11.27□□□□□ -0.6
GINS3-205ENST00000564814 AFAP1Q8N556 730 aa11.27□□□□□ -0.61
GINS3-205ENST00000564814 DIP2CQ9Y2E4 1556 aa11.27□□□□□ -0.61
GINS3-205ENST00000564814 ABCA6Q8N139 1617 aa11.27□□□□□ -0.61
GINS3-205ENST00000564814 KIF15Q9NS87 1388 aa11.27□□□□□ -0.61
GINS3-205ENST00000564814 AGLP35573 1532 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms