RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 ARHGAP5Q13017 1502 aa29.25■■■□□ 2.27
SYNGR3-204ENST00000564642 SCAPERQ9BY12 1400 aa29.23■■■□□ 2.27
SYNGR3-204ENST00000564642 FBXO41Q8TF61 875 aa29.23■■■□□ 2.27
SYNGR3-204ENST00000564642 CDC42BPBQ9Y5S2 1711 aa29.21■■■□□ 2.27
SYNGR3-204ENST00000564642 MTUS2Q5JR59 1369 aa29.2■■■□□ 2.26
SYNGR3-204ENST00000564642 PREX2Q70Z35 1606 aa29.17■■■□□ 2.26
SYNGR3-204ENST00000564642 CDC42BPAQ5VT25 1732 aa29.15■■■□□ 2.26
SYNGR3-204ENST00000564642 POGZQ7Z3K3 1410 aa29.14■■■□□ 2.26
SYNGR3-204ENST00000564642 VPS8Q8N3P4 1428 aa29.13■■■□□ 2.25
SYNGR3-204ENST00000564642 ZMYM4Q5VZL5 1548 aa29.13■■■□□ 2.25
SYNGR3-204ENST00000564642 MAGI2Q86UL8 1455 aa29.1■■■□□ 2.25
SYNGR3-204ENST00000564642 ARHGEF40Q8TER5 1519 aa29.1■■■□□ 2.25
SYNGR3-204ENST00000564642 ARID4BQ4LE39 1312 aaPredicted RBP29.09■■■□□ 2.25
SYNGR3-204ENST00000564642 ZFYVE16Q7Z3T8 1539 aa29.09■■■□□ 2.25
SYNGR3-204ENST00000564642 CCNB3Q8WWL7 1395 aa29.08■■■□□ 2.25
SYNGR3-204ENST00000564642 EHBP1L1Q8N3D4 1523 aa29.08■■■□□ 2.25
SYNGR3-204ENST00000564642 ZNF518AQ6AHZ1 1483 aa29.07■■■□□ 2.24
SYNGR3-204ENST00000564642 GPATCH8Q9UKJ3 1502 aaKnown RBP29.06■■■□□ 2.24
SYNGR3-204ENST00000564642 ZNF777Q9ULD5 760 aaPredicted RBP29.06■■■□□ 2.24
SYNGR3-204ENST00000564642 AFAP1Q8N556 730 aa29.05■■■□□ 2.24
SYNGR3-204ENST00000564642 MYT1LQ9UL68 1186 aa29.04■■■□□ 2.24
SYNGR3-204ENST00000564642 YEATS2Q9ULM3 1422 aa29.03■■■□□ 2.24
SYNGR3-204ENST00000564642 CFDP1Q9UEE9 299 aaPredicted RBP29.03■■■□□ 2.24
SYNGR3-204ENST00000564642 ABCC1P33527 1531 aa29.03■■■□□ 2.24
SYNGR3-204ENST00000564642 TIAM1Q13009 1591 aa29.02■■■□□ 2.24
SYNGR3-204ENST00000564642 ITSN2Q9NZM3 1697 aa29■■■□□ 2.23
SYNGR3-204ENST00000564642 KDM5CP41229 1560 aa28.98■■■□□ 2.23
SYNGR3-204ENST00000564642 ARHGEF12Q9NZN5 1544 aa28.98■■■□□ 2.23
SYNGR3-204ENST00000564642 BCORL1Q5H9F3 1711 aa28.97■■■□□ 2.23
SYNGR3-204ENST00000564642 SUPT6HQ7KZ85 1726 aaKnown RBP28.97■■■□□ 2.23
SYNGR3-204ENST00000564642 SAMD9LQ8IVG5 1584 aa28.96■■■□□ 2.23
SYNGR3-204ENST00000564642 TRAPPC8Q9Y2L5 1435 aa28.96■■■□□ 2.23
SYNGR3-204ENST00000564642 LMTK3Q96Q04 1460 aa28.96■■■□□ 2.23
SYNGR3-204ENST00000564642 ATP10AO60312 1499 aa28.95■■■□□ 2.22
SYNGR3-204ENST00000564642 ADAMTSL3P82987 1691 aa28.95■■■□□ 2.22
SYNGR3-204ENST00000564642 HNRNPMP52272 730 aaKnown RBP eCLIP28.92■■■□□ 2.22
SYNGR3-204ENST00000564642 PLEKHH2Q8IVE3 1493 aa28.91■■■□□ 2.22
SYNGR3-204ENST00000564642 MAP3K1Q13233 1512 aa28.91■■■□□ 2.22
SYNGR3-204ENST00000564642 C9orf84Q5VXU9 1444 aa28.91■■■□□ 2.22
SYNGR3-204ENST00000564642 NCOA2Q15596 1464 aa28.91■■■□□ 2.22
SYNGR3-204ENST00000564642 LRRC9Q6ZRR7 1453 aa28.91■■■□□ 2.22
SYNGR3-204ENST00000564642 MLH3Q9UHC1 1453 aa28.91■■■□□ 2.22
SYNGR3-204ENST00000564642 SYCP2Q9BX26 1530 aa28.9■■■□□ 2.22
SYNGR3-204ENST00000564642 APLP2Q06481 763 aa28.9■■■□□ 2.22
SYNGR3-204ENST00000564642 SIGLEC1Q9BZZ2 1709 aa28.89■■■□□ 2.21
SYNGR3-204ENST00000564642 KIAA1107Q9UPP5 1409 aa28.88■■■□□ 2.21
SYNGR3-204ENST00000564642 MADDQ8WXG6 1647 aa28.85■■■□□ 2.21
SYNGR3-204ENST00000564642 MLECQ14165 292 aa28.85■■■□□ 2.21
SYNGR3-204ENST00000564642 KANK4Q5T7N3 995 aaPredicted RBP28.85■■■□□ 2.21
SYNGR3-204ENST00000564642 DIP2CQ9Y2E4 1556 aa28.84■■■□□ 2.21
SYNGR3-204ENST00000564642 ZNF644Q9H582 1327 aaPredicted RBP28.83■■■□□ 2.21
SYNGR3-204ENST00000564642 PTPRMP28827 1452 aa28.83■■■□□ 2.21
SYNGR3-204ENST00000564642 KIDINS220Q9ULH0 1771 aa28.83■■■□□ 2.21
SYNGR3-204ENST00000564642 SPAG9O60271 1321 aaKnown RBP28.82■■■□□ 2.2
SYNGR3-204ENST00000564642 ABCA6Q8N139 1617 aa28.82■■■□□ 2.2
SYNGR3-204ENST00000564642 RIMS1Q86UR5 1692 aaKnown RBP28.79■■■□□ 2.2
SYNGR3-204ENST00000564642 REREQ9P2R6 1566 aa28.77■■■□□ 2.2
SYNGR3-204ENST00000564642 FER1L4A9Z1Z3 1794 aa28.74■■■□□ 2.19
SYNGR3-204ENST00000564642 SOCS7O14512 581 aa28.73■■■□□ 2.19
SYNGR3-204ENST00000564642 ILDR2Q71H61 639 aa28.73■■■□□ 2.19
SYNGR3-204ENST00000564642 ATP7AQ04656 1500 aa28.73■■■□□ 2.19
SYNGR3-204ENST00000564642 CAMSAP2Q08AD1 1489 aa28.72■■■□□ 2.19
SYNGR3-204ENST00000564642 MBD5Q9P267 1494 aa28.72■■■□□ 2.19
SYNGR3-204ENST00000564642 RSPH4AQ5TD94 716 aa28.7■■■□□ 2.18
SYNGR3-204ENST00000564642 INO80Q9ULG1 1556 aaPredicted RBP28.7■■■□□ 2.18
SYNGR3-204ENST00000564642 PLPPR3Q6T4P5 718 aa28.69■■■□□ 2.18
SYNGR3-204ENST00000564642 AGLP35573 1532 aa28.69■■■□□ 2.18
SYNGR3-204ENST00000564642 MYOM3Q5VTT5 1437 aa28.66■■■□□ 2.18
SYNGR3-204ENST00000564642 CCDC141Q6ZP82 1450 aa28.65■■■□□ 2.18
SYNGR3-204ENST00000564642 RTEL1-TNFRSF6BF6WH68 1400 aa28.63■■■□□ 2.17
SYNGR3-204ENST00000564642 MIA2Q96PC5 1412 aa28.63■■■□□ 2.17
SYNGR3-204ENST00000564642 ESF1Q9H501 851 aaKnown RBP28.63■■■□□ 2.17
SYNGR3-204ENST00000564642 A2MP01023 1474 aa28.62■■■□□ 2.17
SYNGR3-204ENST00000564642 ADGBQ8N7X0 1667 aa28.61■■■□□ 2.17
SYNGR3-204ENST00000564642 TSPY4P0CV99 314 aa28.61■■■□□ 2.17
SYNGR3-204ENST00000564642 TSPY10P0CW01 314 aa28.61■■■□□ 2.17
SYNGR3-204ENST00000564642 ARHGEF5Q12774 1597 aa28.6■■■□□ 2.17
SYNGR3-204ENST00000564642 PLXNC1O60486 1568 aa28.54■■■□□ 2.16
SYNGR3-204ENST00000564642 CEBPAP49715 358 aaPredicted RBP28.53■■■□□ 2.16
SYNGR3-204ENST00000564642 DISP3Q9P2K9 1392 aa28.51■■■□□ 2.16
SYNGR3-204ENST00000564642 DHX29Q7Z478 1369 aaKnown RBP28.5■■■□□ 2.15
SYNGR3-204ENST00000564642 GGT6Q6P531 493 aa28.5■■■□□ 2.15
SYNGR3-204ENST00000564642 PTPN23Q9H3S7 1636 aa28.5■■■□□ 2.15
SYNGR3-204ENST00000564642 CNTLNQ9NXG0 1405 aa28.49■■■□□ 2.15
SYNGR3-204ENST00000564642 C3P01024 1663 aa28.45■■■□□ 2.15
SYNGR3-204ENST00000564642 FGD6Q6ZV73 1430 aa28.45■■■□□ 2.15
SYNGR3-204ENST00000564642 MAST1Q9Y2H9 1570 aa28.45■■■□□ 2.14
SYNGR3-204ENST00000564642 KIF3BO15066 747 aa28.43■■■□□ 2.14
SYNGR3-204ENST00000564642 PPP6R1Q9UPN7 881 aa28.42■■■□□ 2.14
SYNGR3-204ENST00000564642 SETD1BQ9UPS6 1966 aaKnown RBP28.41■■■□□ 2.14
SYNGR3-204ENST00000564642 MROH2AA6NES4 1674 aa28.41■■■□□ 2.14
SYNGR3-204ENST00000564642 CLTCQ00610 1675 aaKnown RBP28.4■■■□□ 2.14
SYNGR3-204ENST00000564642 PREX1Q8TCU6 1659 aa28.39■■■□□ 2.14
SYNGR3-204ENST00000564642 TCOF1Q13428 1488 aaKnown RBP28.39■■■□□ 2.13
SYNGR3-204ENST00000564642 ZMYM3Q14202 1370 aa28.38■■■□□ 2.13
SYNGR3-204ENST00000564642 ABCC5O15440 1437 aa28.36■■■□□ 2.13
SYNGR3-204ENST00000564642 CROCC2H7BZ55 1655 aa28.35■■■□□ 2.13
SYNGR3-204ENST00000564642 HSPA2P54652 639 aa28.35■■■□□ 2.13
SYNGR3-204ENST00000564642 DNMT1P26358 1616 aaKnown RBP28.34■■■□□ 2.13
SYNGR3-204ENST00000564642 DAPK1P53355 1430 aa28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms