RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 ARSIQ5FYB1 569 aa9.81□□□□□ -0.84
CHD9-211ENST00000564600 BCL11BQ9C0K0 894 aaPredicted RBP9.81□□□□□ -0.84
CHD9-211ENST00000564600 GPR153Q6NV75 609 aa9.8□□□□□ -0.84
CHD9-211ENST00000564600 RIMBP2O15034 1052 aa9.79□□□□□ -0.84
CHD9-211ENST00000564600 STK24Q9Y6E0 443 aa9.79□□□□□ -0.84
CHD9-211ENST00000564600 FBXO22Q8NEZ5 403 aa9.76□□□□□ -0.85
CHD9-211ENST00000564600 MFRPQ9BY79 579 aa9.75□□□□□ -0.85
CHD9-211ENST00000564600 RNF166Q96A37 237 aaPredicted RBP9.74□□□□□ -0.85
CHD9-211ENST00000564600 STK25O00506 426 aa9.72□□□□□ -0.85
CHD9-211ENST00000564600 NLRP6P59044 892 aa9.72□□□□□ -0.85
CHD9-211ENST00000564600 ZNF687Q8N1G0 1237 aa9.72□□□□□ -0.85
CHD9-211ENST00000564600 ANKRD13DQ6ZTN6 518 aa9.7□□□□□ -0.86
CHD9-211ENST00000564600 MYT1LQ9UL68 1186 aa9.7□□□□□ -0.86
CHD9-211ENST00000564600 C2orf72A6NCS6 295 aa9.69□□□□□ -0.86
CHD9-211ENST00000564600 ECM2O94769 699 aaPredicted RBP9.69□□□□□ -0.86
CHD9-211ENST00000564600 ZSWIM6Q9HCJ5 1215 aa9.69□□□□□ -0.86
CHD9-211ENST00000564600 RGL2O15211 777 aa9.68□□□□□ -0.86
CHD9-211ENST00000564600 NUDT7P0C024 238 aa9.68□□□□□ -0.86
CHD9-211ENST00000564600 ZNF316A6NFI3 1004 aaPredicted RBP9.66□□□□□ -0.86
CHD9-211ENST00000564600 AXIN2Q9Y2T1 843 aa9.65□□□□□ -0.86
CHD9-211ENST00000564600 KIF3CO14782 793 aa9.64□□□□□ -0.87
CHD9-211ENST00000564600 PPP1R37O75864 691 aa9.64□□□□□ -0.87
CHD9-211ENST00000564600 PKD2Q13563 968 aa9.62□□□□□ -0.87
CHD9-211ENST00000564600 POTEEQ6S8J3 1075 aa9.62□□□□□ -0.87
CHD9-211ENST00000564600 LHX6Q9UPM6 363 aa9.61□□□□□ -0.87
CHD9-211ENST00000564600 LSM11P83369 360 aaKnown RBP eCLIP9.59□□□□□ -0.87
CHD9-211ENST00000564600 PCDHGA4Q9Y5G9 962 aa9.59□□□□□ -0.87
CHD9-211ENST00000564600 TAOK2Q9UL54 1235 aa9.56□□□□□ -0.88
CHD9-211ENST00000564600 TMC2Q8TDI7 906 aa9.55□□□□□ -0.88
CHD9-211ENST00000564600 PSEN2P49810 448 aa9.47□□□□□ -0.89
CHD9-211ENST00000564600 DMRTA1Q5VZB9 504 aa9.47□□□□□ -0.89
CHD9-211ENST00000564600 SLC34A2O95436 690 aa9.46□□□□□ -0.9
CHD9-211ENST00000564600 PTGER2P43116 358 aa9.46□□□□□ -0.9
CHD9-211ENST00000564600 PLPP6Q8IY26 295 aa9.44□□□□□ -0.9
CHD9-211ENST00000564600 PBX2P40425 430 aa9.43□□□□□ -0.9
CHD9-211ENST00000564600 ADGRD1Q6QNK2 874 aa9.43□□□□□ -0.9
CHD9-211ENST00000564600 DSG2Q14126 1118 aa9.42□□□□□ -0.9
CHD9-211ENST00000564600 KDM4FA0A1W2PPD8 638 aa9.41□□□□□ -0.9
CHD9-211ENST00000564600 ARHGAP33O14559 1287 aa9.4□□□□□ -0.9
CHD9-211ENST00000564600 PLA2G2EQ9NZK7 142 aa9.39□□□□□ -0.91
CHD9-211ENST00000564600 CHGAP10645 457 aaKnown RBP9.38□□□□□ -0.91
CHD9-211ENST00000564600 PTCD2Q8WV60 388 aaKnown RBP9.38□□□□□ -0.91
CHD9-211ENST00000564600 UPF1Q92900 1129 aaKnown RBP eCLIP9.38□□□□□ -0.91
CHD9-211ENST00000564600 FOXK1P85037 733 aa9.37□□□□□ -0.91
CHD9-211ENST00000564600 NKX1-1Q15270 411 aaPredicted RBP9.36□□□□□ -0.91
CHD9-211ENST00000564600 KCTD12Q96CX2 325 aaKnown RBP9.36□□□□□ -0.91
CHD9-211ENST00000564600 GPHNQ9NQX3 736 aaPredicted RBP9.36□□□□□ -0.91
CHD9-211ENST00000564600 KCNK17Q96T54 332 aa9.35□□□□□ -0.91
CHD9-211ENST00000564600 HRO43593 1189 aa9.34□□□□□ -0.91
CHD9-211ENST00000564600 HS6ST3Q8IZP7 471 aa9.34□□□□□ -0.91
CHD9-211ENST00000564600 HCSTQ9UBK5 93 aa9.33□□□□□ -0.92
CHD9-211ENST00000564600 PPP4R3BQ5MIZ7 849 aa9.31□□□□□ -0.92
CHD9-211ENST00000564600 PSDA5PKW4 1024 aaPredicted RBP9.29□□□□□ -0.92
CHD9-211ENST00000564600 PTPN5P54829 565 aa9.28□□□□□ -0.92
CHD9-211ENST00000564600 ZNF454Q8N9F8 522 aa9.28□□□□□ -0.92
CHD9-211ENST00000564600 TK2O00142 265 aa9.26□□□□□ -0.93
CHD9-211ENST00000564600 OXER1Q8TDS5 423 aa9.26□□□□□ -0.93
CHD9-211ENST00000564600 TBC1D12O60347 775 aa9.25□□□□□ -0.93
CHD9-211ENST00000564600 VPS9D1Q9Y2B5 631 aa9.25□□□□□ -0.93
CHD9-211ENST00000564600 PPP1R15BQ5SWA1 713 aa9.24□□□□□ -0.93
CHD9-211ENST00000564600 STAC3Q96MF2 364 aa9.24□□□□□ -0.93
CHD9-211ENST00000564600 NCKAP5LQ9HCH0 1330 aa9.24□□□□□ -0.93
CHD9-211ENST00000564600 CRISPLD2Q9H0B8 497 aa9.22□□□□□ -0.93
CHD9-211ENST00000564600 RTN4Q9NQC3 1192 aaKnown RBP9.21□□□□□ -0.94
CHD9-211ENST00000564600 FOSBP53539 338 aa9.18□□□□□ -0.94
CHD9-211ENST00000564600 KCNH8Q96L42 1107 aa9.17□□□□□ -0.94
CHD9-211ENST00000564600 ADAM33Q9BZ11 813 aa9.17□□□□□ -0.94
CHD9-211ENST00000564600 BCL2L12Q9HB09 334 aa9.17□□□□□ -0.94
CHD9-211ENST00000564600 EVI5O60447 810 aa9.16□□□□□ -0.94
CHD9-211ENST00000564600 LARP6Q9BRS8 491 aaKnown RBP9.16□□□□□ -0.94
CHD9-211ENST00000564600 ZBED2Q9BTP6 218 aa9.15□□□□□ -0.94
CHD9-211ENST00000564600 PTPREP23469 700 aa9.14□□□□□ -0.95
CHD9-211ENST00000564600 BHMG1C9JSJ3 638 aaPredicted RBP9.13□□□□□ -0.95
CHD9-211ENST00000564600 GTPBP6O43824 516 aaPredicted RBP9.13□□□□□ -0.95
CHD9-211ENST00000564600 THSD4Q6ZMP0 1018 aa9.13□□□□□ -0.95
CHD9-211ENST00000564600 PROX2Q3B8N5 592 aa9.12□□□□□ -0.95
CHD9-211ENST00000564600 WNT2BQ93097 391 aa9.12□□□□□ -0.95
CHD9-211ENST00000564600 GOLGA8CPA6NN73 597 aa9.11□□□□□ -0.95
CHD9-211ENST00000564600 PDE4AP27815 886 aa9.11□□□□□ -0.95
CHD9-211ENST00000564600 EMILIN3Q9NT22 766 aa9.11□□□□□ -0.95
CHD9-211ENST00000564600 AMER1Q5JTC6 1135 aaPredicted RBP9.1□□□□□ -0.95
CHD9-211ENST00000564600 CADPS2Q86UW7 1296 aa9.1□□□□□ -0.95
CHD9-211ENST00000564600 MRPL50Q8N5N7 158 aaKnown RBP9.1□□□□□ -0.95
CHD9-211ENST00000564600 ZDHHC16Q969W1 377 aa9.1□□□□□ -0.95
CHD9-211ENST00000564600 JPH4Q96JJ6 628 aa9.1□□□□□ -0.95
CHD9-211ENST00000564600 DNAJC5Q9H3Z4 198 aa9.1□□□□□ -0.95
CHD9-211ENST00000564600 DCAF8L2P0C7V8 631 aa9.09□□□□□ -0.95
CHD9-211ENST00000564600 COL9A1P20849 921 aa9.09□□□□□ -0.95
CHD9-211ENST00000564600 DDX27Q96GQ7 796 aaKnown RBP9.09□□□□□ -0.95
CHD9-211ENST00000564600 ANO8Q9HCE9 1232 aaPredicted RBP9.09□□□□□ -0.95
CHD9-211ENST00000564600 MAP3K9P80192 1104 aa9.08□□□□□ -0.96
CHD9-211ENST00000564600 SLC4A5Q9BY07 1137 aa9.06□□□□□ -0.96
CHD9-211ENST00000564600 PCDHGA10Q9Y5H3 936 aa9.06□□□□□ -0.96
CHD9-211ENST00000564600 BCAMP50895 628 aa9.05□□□□□ -0.96
CHD9-211ENST00000564600 RYDENQ9NUL5 291 aaKnown RBP9.03□□□□□ -0.96
CHD9-211ENST00000564600 MFSD10Q14728 455 aa9.02□□□□□ -0.97
CHD9-211ENST00000564600 A0A0G2JS52 829 aa9.01□□□□□ -0.97
CHD9-211ENST00000564600 NBPF3Q9H094 633 aa9.01□□□□□ -0.97
CHD9-211ENST00000564600 SEPT9Q9UHD8 586 aaPredicted RBP9.01□□□□□ -0.97
CHD9-211ENST00000564600 PPP1R3GB7ZBB8 358 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms