RNA–Protein interactions for RNA: ENST00000564581.1

SUB1P3-201, Transcript of SUB1 homolog, transcriptional regulator pseudogene 3, humanhuman

BASIC

Gene SUB1P3, Length 315 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P3-201ENST00000564581 POTEBQ6S5H4 581 aa7.84□□□□□ -1.15
SUB1P3-201ENST00000564581 DCAF8L2P0C7V8 631 aa7.83□□□□□ -1.16
SUB1P3-201ENST00000564581 ZNF710Q8N1W2 664 aa7.83□□□□□ -1.16
SUB1P3-201ENST00000564581 PCDH10Q9P2E7 1040 aa7.83□□□□□ -1.16
SUB1P3-201ENST00000564581 FAM205CA6NFA0 338 aa7.82□□□□□ -1.16
SUB1P3-201ENST00000564581 C2orf72A6NCS6 295 aa7.81□□□□□ -1.16
SUB1P3-201ENST00000564581 DOK7Q18PE1 504 aa7.81□□□□□ -1.16
SUB1P3-201ENST00000564581 HS3ST6Q96QI5 342 aa7.8□□□□□ -1.16
SUB1P3-201ENST00000564581 KIF3CO14782 793 aa7.79□□□□□ -1.16
SUB1P3-201ENST00000564581 HOXB1P14653 301 aaPredicted RBP7.79□□□□□ -1.16
SUB1P3-201ENST00000564581 KHSRPQ92945 711 aaKnown RBP eCLIP7.78□□□□□ -1.16
SUB1P3-201ENST00000564581 ARSIQ5FYB1 569 aa7.76□□□□□ -1.17
SUB1P3-201ENST00000564581 GPR153Q6NV75 609 aa7.76□□□□□ -1.17
SUB1P3-201ENST00000564581 RIMBP2O15034 1052 aa7.75□□□□□ -1.17
SUB1P3-201ENST00000564581 TMC2Q8TDI7 906 aa7.75□□□□□ -1.17
SUB1P3-201ENST00000564581 DNAJC5Q9H3Z4 198 aa7.75□□□□□ -1.17
SUB1P3-201ENST00000564581 ERBB3P21860 1342 aa7.74□□□□□ -1.17
SUB1P3-201ENST00000564581 GTPBP6O43824 516 aaPredicted RBP7.72□□□□□ -1.17
SUB1P3-201ENST00000564581 VARS2Q5ST30 1063 aaKnown RBP7.72□□□□□ -1.17
SUB1P3-201ENST00000564581 KRTAP3-3Q9BYR6 98 aa7.72□□□□□ -1.17
SUB1P3-201ENST00000564581 KRTAP3-2Q9BYR7 98 aa7.72□□□□□ -1.17
SUB1P3-201ENST00000564581 ZSWIM6Q9HCJ5 1215 aa7.71□□□□□ -1.18
SUB1P3-201ENST00000564581 RTN4Q9NQC3 1192 aaKnown RBP7.7□□□□□ -1.18
SUB1P3-201ENST00000564581 NUDT7P0C024 238 aa7.69□□□□□ -1.18
SUB1P3-201ENST00000564581 DSG2Q14126 1118 aa7.68□□□□□ -1.18
SUB1P3-201ENST00000564581 SPNS2Q8IVW8 549 aa7.68□□□□□ -1.18
SUB1P3-201ENST00000564581 PLPP6Q8IY26 295 aa7.68□□□□□ -1.18
SUB1P3-201ENST00000564581 GPHNQ9NQX3 736 aaPredicted RBP7.68□□□□□ -1.18
SUB1P3-201ENST00000564581 PCDHGA4Q9Y5G9 962 aa7.68□□□□□ -1.18
SUB1P3-201ENST00000564581 SLC34A2O95436 690 aa7.65□□□□□ -1.18
SUB1P3-201ENST00000564581 FOXK1P85037 733 aa7.65□□□□□ -1.18
SUB1P3-201ENST00000564581 RYDENQ9NUL5 291 aaKnown RBP7.65□□□□□ -1.18
SUB1P3-201ENST00000564581 ZNF316A6NFI3 1004 aaPredicted RBP7.64□□□□□ -1.19
SUB1P3-201ENST00000564581 NCKAP5LQ9HCH0 1330 aa7.63□□□□□ -1.19
SUB1P3-201ENST00000564581 MMRN1Q13201 1228 aa7.63□□□□□ -1.19
SUB1P3-201ENST00000564581 AMER1Q5JTC6 1135 aaPredicted RBP7.63□□□□□ -1.19
SUB1P3-201ENST00000564581 LHX6Q9UPM6 363 aa7.63□□□□□ -1.19
SUB1P3-201ENST00000564581 ZNF687Q8N1G0 1237 aa7.62□□□□□ -1.19
SUB1P3-201ENST00000564581 CRISPLD2Q9H0B8 497 aa7.62□□□□□ -1.19
SUB1P3-201ENST00000564581 CADPS2Q86UW7 1296 aa7.61□□□□□ -1.19
SUB1P3-201ENST00000564581 PTCD2Q8WV60 388 aaKnown RBP7.6□□□□□ -1.19
SUB1P3-201ENST00000564581 UPF1Q92900 1129 aaKnown RBP eCLIP7.6□□□□□ -1.19
SUB1P3-201ENST00000564581 PPP1R15BQ5SWA1 713 aa7.59□□□□□ -1.19
SUB1P3-201ENST00000564581 LARP6Q9BRS8 491 aaKnown RBP7.59□□□□□ -1.19
SUB1P3-201ENST00000564581 KDM4FA0A1W2PPD8 638 aa7.58□□□□□ -1.2
SUB1P3-201ENST00000564581 PDE4AP27815 886 aa7.58□□□□□ -1.2
SUB1P3-201ENST00000564581 POTEEQ6S8J3 1075 aa7.58□□□□□ -1.2
SUB1P3-201ENST00000564581 AXIN2Q9Y2T1 843 aa7.58□□□□□ -1.2
SUB1P3-201ENST00000564581 BBXQ8WY36 941 aaPredicted RBP7.57□□□□□ -1.2
SUB1P3-201ENST00000564581 ANKRD13DQ6ZTN6 518 aa7.55□□□□□ -1.2
SUB1P3-201ENST00000564581 OXER1Q8TDS5 423 aa7.55□□□□□ -1.2
SUB1P3-201ENST00000564581 DDX27Q96GQ7 796 aaKnown RBP7.54□□□□□ -1.2
SUB1P3-201ENST00000564581 TBC1D12O60347 775 aa7.53□□□□□ -1.2
SUB1P3-201ENST00000564581 MFSD10Q14728 455 aa7.51□□□□□ -1.21
SUB1P3-201ENST00000564581 LSM11P83369 360 aaKnown RBP eCLIP7.5□□□□□ -1.21
SUB1P3-201ENST00000564581 PAXIP1Q6ZW49 1069 aaPredicted RBP7.5□□□□□ -1.21
SUB1P3-201ENST00000564581 SPRYD3Q8NCJ5 442 aa7.5□□□□□ -1.21
SUB1P3-201ENST00000564581 CFAP44Q96MT7 982 aa7.5□□□□□ -1.21
SUB1P3-201ENST00000564581 EMILIN3Q9NT22 766 aa7.5□□□□□ -1.21
SUB1P3-201ENST00000564581 PSEN2P49810 448 aa7.49□□□□□ -1.21
SUB1P3-201ENST00000564581 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.48□□□□□ -1.21
SUB1P3-201ENST00000564581 EVI5O60447 810 aa7.47□□□□□ -1.21
SUB1P3-201ENST00000564581 DMRTA1Q5VZB9 504 aa7.47□□□□□ -1.21
SUB1P3-201ENST00000564581 ZNF454Q8N9F8 522 aa7.47□□□□□ -1.21
SUB1P3-201ENST00000564581 MYT1LQ9UL68 1186 aa7.47□□□□□ -1.21
SUB1P3-201ENST00000564581 PSDA5PKW4 1024 aaPredicted RBP7.46□□□□□ -1.22
SUB1P3-201ENST00000564581 ARHGAP33O14559 1287 aa7.46□□□□□ -1.22
SUB1P3-201ENST00000564581 PBX2P40425 430 aa7.46□□□□□ -1.22
SUB1P3-201ENST00000564581 MAP3K9P80192 1104 aa7.46□□□□□ -1.22
SUB1P3-201ENST00000564581 PPP4R3BQ5MIZ7 849 aa7.46□□□□□ -1.22
SUB1P3-201ENST00000564581 RNF166Q96A37 237 aaPredicted RBP7.46□□□□□ -1.22
SUB1P3-201ENST00000564581 KCNK17Q96T54 332 aa7.44□□□□□ -1.22
SUB1P3-201ENST00000564581 ANO8Q9HCE9 1232 aaPredicted RBP7.44□□□□□ -1.22
SUB1P3-201ENST00000564581 FOSBP53539 338 aa7.42□□□□□ -1.22
SUB1P3-201ENST00000564581 ADGRD1Q6QNK2 874 aa7.42□□□□□ -1.22
SUB1P3-201ENST00000564581 DPYSL4O14531 572 aa7.41□□□□□ -1.22
SUB1P3-201ENST00000564581 CAMK2BQ13554 666 aa7.41□□□□□ -1.22
SUB1P3-201ENST00000564581 ADAM33Q9BZ11 813 aa7.39□□□□□ -1.23
SUB1P3-201ENST00000564581 JPH4Q96JJ6 628 aa7.38□□□□□ -1.23
SUB1P3-201ENST00000564581 BCL2L12Q9HB09 334 aa7.38□□□□□ -1.23
SUB1P3-201ENST00000564581 PCDHGA10Q9Y5H3 936 aa7.38□□□□□ -1.23
SUB1P3-201ENST00000564581 HRO43593 1189 aa7.37□□□□□ -1.23
SUB1P3-201ENST00000564581 PTGER2P43116 358 aa7.37□□□□□ -1.23
SUB1P3-201ENST00000564581 ZDHHC16Q969W1 377 aa7.37□□□□□ -1.23
SUB1P3-201ENST00000564581 TK2O00142 265 aa7.35□□□□□ -1.23
SUB1P3-201ENST00000564581 PTPREP23469 700 aa7.35□□□□□ -1.23
SUB1P3-201ENST00000564581 TSHZ2Q9NRE2 1034 aa7.35□□□□□ -1.23
SUB1P3-201ENST00000564581 VPS9D1Q9Y2B5 631 aa7.35□□□□□ -1.23
SUB1P3-201ENST00000564581 DDX12PQ92771 950 aa7.34□□□□□ -1.23
SUB1P3-201ENST00000564581 KCNH8Q96L42 1107 aa7.34□□□□□ -1.23
SUB1P3-201ENST00000564581 PHF14O94880 888 aa7.32□□□□□ -1.24
SUB1P3-201ENST00000564581 COL9A1P20849 921 aa7.32□□□□□ -1.24
SUB1P3-201ENST00000564581 E2F4Q16254 413 aa7.32□□□□□ -1.24
SUB1P3-201ENST00000564581 RBM33Q96EV2 1170 aaKnown RBP7.32□□□□□ -1.24
SUB1P3-201ENST00000564581 ZBED2Q9BTP6 218 aa7.32□□□□□ -1.24
SUB1P3-201ENST00000564581 WDR70Q9NW82 654 aa7.32□□□□□ -1.24
SUB1P3-201ENST00000564581 KCTD12Q96CX2 325 aaKnown RBP7.31□□□□□ -1.24
SUB1P3-201ENST00000564581 STAC3Q96MF2 364 aa7.31□□□□□ -1.24
SUB1P3-201ENST00000564581 PROX2Q3B8N5 592 aa7.3□□□□□ -1.24
SUB1P3-201ENST00000564581 TYW1BQ6NUM6 668 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms