RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 PHLDB1Q86UU1 1377 aa19.39■□□□□ 0.69
KARS-204ENST00000564578 EFCAB2Q5VUJ9 269 aa19.38■□□□□ 0.69
KARS-204ENST00000564578 NEO1Q92859 1461 aa19.37■□□□□ 0.69
KARS-204ENST00000564578 CFDP1Q9UEE9 299 aaPredicted RBP19.37■□□□□ 0.69
KARS-204ENST00000564578 ARHGAP5Q13017 1502 aa19.37■□□□□ 0.69
KARS-204ENST00000564578 COL17A1Q9UMD9 1497 aaPredicted RBP19.37■□□□□ 0.69
KARS-204ENST00000564578 AKNAQ7Z591 1439 aa19.35■□□□□ 0.69
KARS-204ENST00000564578 MYOM3Q5VTT5 1437 aa19.34■□□□□ 0.69
KARS-204ENST00000564578 ZNF644Q9H582 1327 aaPredicted RBP19.33■□□□□ 0.69
KARS-204ENST00000564578 ZNF777Q9ULD5 760 aaPredicted RBP19.32■□□□□ 0.68
KARS-204ENST00000564578 ITSN2Q9NZM3 1697 aa19.31■□□□□ 0.68
KARS-204ENST00000564578 CFAP74Q9C0B2 1584 aa19.3■□□□□ 0.68
KARS-204ENST00000564578 SAMD9LQ8IVG5 1584 aa19.3■□□□□ 0.68
KARS-204ENST00000564578 ADGRL1O94910 1474 aa19.29■□□□□ 0.68
KARS-204ENST00000564578 MIA2Q96PC5 1412 aa19.29■□□□□ 0.68
KARS-204ENST00000564578 SCAPERQ9BY12 1400 aa19.29■□□□□ 0.68
KARS-204ENST00000564578 ARHGEF12Q9NZN5 1544 aa19.29■□□□□ 0.68
KARS-204ENST00000564578 RAPGEF3O95398 923 aa19.28■□□□□ 0.68
KARS-204ENST00000564578 FGD6Q6ZV73 1430 aa19.27■□□□□ 0.67
KARS-204ENST00000564578 KDM6BO15054 1643 aa19.26■□□□□ 0.67
KARS-204ENST00000564578 ABCC1P33527 1531 aa19.26■□□□□ 0.67
KARS-204ENST00000564578 HNRNPMP52272 730 aaKnown RBP eCLIP19.25■□□□□ 0.67
KARS-204ENST00000564578 KIAA1107Q9UPP5 1409 aa19.25■□□□□ 0.67
KARS-204ENST00000564578 DENND4BO75064 1496 aaPredicted RBP19.24■□□□□ 0.67
KARS-204ENST00000564578 CAMSAP2Q08AD1 1489 aa19.24■□□□□ 0.67
KARS-204ENST00000564578 AFAP1Q8N556 730 aa19.23■□□□□ 0.67
KARS-204ENST00000564578 MBD5Q9P267 1494 aa19.23■□□□□ 0.67
KARS-204ENST00000564578 TRAPPC8Q9Y2L5 1435 aa19.23■□□□□ 0.67
KARS-204ENST00000564578 SYCP2Q9BX26 1530 aa19.23■□□□□ 0.67
KARS-204ENST00000564578 POGZQ7Z3K3 1410 aa19.22■□□□□ 0.67
KARS-204ENST00000564578 FRMPD1Q5SYB0 1578 aa19.22■□□□□ 0.67
KARS-204ENST00000564578 PLEKHH2Q8IVE3 1493 aa19.22■□□□□ 0.67
KARS-204ENST00000564578 RICTORQ6R327 1708 aa19.21■□□□□ 0.66
KARS-204ENST00000564578 PTPN23Q9H3S7 1636 aa19.2■□□□□ 0.66
KARS-204ENST00000564578 TCOF1Q13428 1488 aaKnown RBP19.2■□□□□ 0.66
KARS-204ENST00000564578 ZNF518AQ6AHZ1 1483 aa19.19■□□□□ 0.66
KARS-204ENST00000564578 KDM5CP41229 1560 aa19.16■□□□□ 0.66
KARS-204ENST00000564578 RRBP1Q9P2E9 1410 aaKnown RBP19.15■□□□□ 0.66
KARS-204ENST00000564578 FAM50AQ14320 339 aaKnown RBP19.14■□□□□ 0.65
KARS-204ENST00000564578 RSPH4AQ5TD94 716 aa19.14■□□□□ 0.65
KARS-204ENST00000564578 ZMYM4Q5VZL5 1548 aa19.13■□□□□ 0.65
KARS-204ENST00000564578 ARHGEF5Q12774 1597 aa19.13■□□□□ 0.65
KARS-204ENST00000564578 CCDC141Q6ZP82 1450 aa19.12■□□□□ 0.65
KARS-204ENST00000564578 ABCC5O15440 1437 aa19.11■□□□□ 0.65
KARS-204ENST00000564578 MLH3Q9UHC1 1453 aa19.11■□□□□ 0.65
KARS-204ENST00000564578 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.11■□□□□ 0.65
KARS-204ENST00000564578 YEATS2Q9ULM3 1422 aa19.1■□□□□ 0.65
KARS-204ENST00000564578 SPAG9O60271 1321 aaKnown RBP19.09■□□□□ 0.65
KARS-204ENST00000564578 MAGI2Q86UL8 1455 aa19.09■□□□□ 0.65
KARS-204ENST00000564578 DAPK1P53355 1430 aa19.08■□□□□ 0.65
KARS-204ENST00000564578 DNMT1P26358 1616 aaKnown RBP19.07■□□□□ 0.64
KARS-204ENST00000564578 TSPY4P0CV99 314 aa19.07■□□□□ 0.64
KARS-204ENST00000564578 TSPY10P0CW01 314 aa19.07■□□□□ 0.64
KARS-204ENST00000564578 HECW2Q9P2P5 1572 aa19.07■□□□□ 0.64
KARS-204ENST00000564578 KIDINS220Q9ULH0 1771 aa19.06■□□□□ 0.64
KARS-204ENST00000564578 PTPRKQ15262 1439 aa19.06■□□□□ 0.64
KARS-204ENST00000564578 RTEL1-TNFRSF6BF6WH68 1400 aa19.05■□□□□ 0.64
KARS-204ENST00000564578 INO80Q9ULG1 1556 aaPredicted RBP19.05■□□□□ 0.64
KARS-204ENST00000564578 ZFYVE16Q7Z3T8 1539 aa19.05■□□□□ 0.64
KARS-204ENST00000564578 ATP7AQ04656 1500 aa19.04■□□□□ 0.64
KARS-204ENST00000564578 MYT1LQ9UL68 1186 aa19.04■□□□□ 0.64
KARS-204ENST00000564578 C9orf84Q5VXU9 1444 aa19.04■□□□□ 0.64
KARS-204ENST00000564578 ARHGEF40Q8TER5 1519 aa19.03■□□□□ 0.64
KARS-204ENST00000564578 SHANK2Q9UPX8 1470 aa19.02■□□□□ 0.64
KARS-204ENST00000564578 MAST1Q9Y2H9 1570 aa19.02■□□□□ 0.64
KARS-204ENST00000564578 CHIC2Q9UKJ5 165 aa19.02■□□□□ 0.63
KARS-204ENST00000564578 CROCC2H7BZ55 1655 aa19.01■□□□□ 0.63
KARS-204ENST00000564578 ABCA6Q8N139 1617 aa19.01■□□□□ 0.63
KARS-204ENST00000564578 ITGAEP38570 1179 aa19.01■□□□□ 0.63
KARS-204ENST00000564578 DIP2CQ9Y2E4 1556 aa19.01■□□□□ 0.63
KARS-204ENST00000564578 ATP10AO60312 1499 aa19■□□□□ 0.63
KARS-204ENST00000564578 NCOA1Q15788 1441 aa18.97■□□□□ 0.63
KARS-204ENST00000564578 SIGLEC1Q9BZZ2 1709 aa18.96■□□□□ 0.63
KARS-204ENST00000564578 ADGRL2O95490 1459 aa18.96■□□□□ 0.63
KARS-204ENST00000564578 RRP7BPQ9NSQ0 103 aa18.96■□□□□ 0.63
KARS-204ENST00000564578 A2MP01023 1474 aa18.94■□□□□ 0.62
KARS-204ENST00000564578 PLXNC1O60486 1568 aa18.94■□□□□ 0.62
KARS-204ENST00000564578 ANKRD30AQ9BXX3 1397 aa18.93■□□□□ 0.62
KARS-204ENST00000564578 REREQ9P2R6 1566 aa18.93■□□□□ 0.62
KARS-204ENST00000564578 DHX29Q7Z478 1369 aaKnown RBP18.93■□□□□ 0.62
KARS-204ENST00000564578 KIF15Q9NS87 1388 aa18.93■□□□□ 0.62
KARS-204ENST00000564578 ROCK1Q13464 1354 aa18.92■□□□□ 0.62
KARS-204ENST00000564578 ADGBQ8N7X0 1667 aa18.92■□□□□ 0.62
KARS-204ENST00000564578 AGLP35573 1532 aa18.88■□□□□ 0.61
KARS-204ENST00000564578 ARID4BQ4LE39 1312 aaPredicted RBP18.88■□□□□ 0.61
KARS-204ENST00000564578 DUOX2Q9NRD8 1548 aa18.87■□□□□ 0.61
KARS-204ENST00000564578 KIF3BO15066 747 aa18.84■□□□□ 0.61
KARS-204ENST00000564578 NAIPQ13075 1403 aa18.83■□□□□ 0.61
KARS-204ENST00000564578 ERBINQ96RT1 1412 aa18.83■□□□□ 0.61
KARS-204ENST00000564578 ANKRD50Q9ULJ7 1429 aa18.83■□□□□ 0.61
KARS-204ENST00000564578 MLECQ14165 292 aa18.82■□□□□ 0.6
KARS-204ENST00000564578 HFM1A2PYH4 1435 aa18.82■□□□□ 0.6
KARS-204ENST00000564578 TRIM26Q12899 539 aaPredicted RBP18.81■□□□□ 0.6
KARS-204ENST00000564578 GGT6Q6P531 493 aa18.8■□□□□ 0.6
KARS-204ENST00000564578 BCORL1Q5H9F3 1711 aa18.8■□□□□ 0.6
KARS-204ENST00000564578 KDM4FA0A1W2PPD8 638 aa18.8■□□□□ 0.6
KARS-204ENST00000564578 EIF2AK4Q9P2K8 1649 aaKnown RBP18.79■□□□□ 0.6
KARS-204ENST00000564578 ADAMTSL3P82987 1691 aa18.76■□□□□ 0.59
KARS-204ENST00000564578 MROH1Q8NDA8 1641 aa18.75■□□□□ 0.59
KARS-204ENST00000564578 GCC2Q8IWJ2 1684 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms