RNA–Protein interactions for RNA: ENST00000564476.1

SPNS1-206, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 3

Gene SPNS1, Length 890 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-206ENST00000564476 CD109Q6YHK3 1445 aa28.77■■■□□ 2.2
SPNS1-206ENST00000564476 ARAP3Q8WWN8 1544 aa28.74■■■□□ 2.19
SPNS1-206ENST00000564476 EFCAB2Q5VUJ9 269 aa28.74■■■□□ 2.19
SPNS1-206ENST00000564476 PREX2Q70Z35 1606 aa28.73■■■□□ 2.19
SPNS1-206ENST00000564476 CDC42BPBQ9Y5S2 1711 aa28.73■■■□□ 2.19
SPNS1-206ENST00000564476 FGD6Q6ZV73 1430 aa28.71■■■□□ 2.19
SPNS1-206ENST00000564476 RRBP1Q9P2E9 1410 aaKnown RBP28.7■■■□□ 2.19
SPNS1-206ENST00000564476 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.69■■■□□ 2.18
SPNS1-206ENST00000564476 TRIM26Q12899 539 aaPredicted RBP28.64■■■□□ 2.18
SPNS1-206ENST00000564476 TEX14Q8IWB6 1497 aa28.64■■■□□ 2.17
SPNS1-206ENST00000564476 ARHGAP5Q13017 1502 aa28.64■■■□□ 2.17
SPNS1-206ENST00000564476 PTPN23Q9H3S7 1636 aa28.63■■■□□ 2.17
SPNS1-206ENST00000564476 AEBP2Q6ZN18 517 aaPredicted RBP28.63■■■□□ 2.17
SPNS1-206ENST00000564476 TCOF1Q13428 1488 aaKnown RBP28.62■■■□□ 2.17
SPNS1-206ENST00000564476 ZNF777Q9ULD5 760 aaPredicted RBP28.61■■■□□ 2.17
SPNS1-206ENST00000564476 RSPH4AQ5TD94 716 aa28.6■■■□□ 2.17
SPNS1-206ENST00000564476 FANCAO15360 1455 aa28.59■■■□□ 2.17
SPNS1-206ENST00000564476 PLEKHH2Q8IVE3 1493 aa28.59■■■□□ 2.17
SPNS1-206ENST00000564476 COL17A1Q9UMD9 1497 aaPredicted RBP28.59■■■□□ 2.17
SPNS1-206ENST00000564476 FAM50AQ14320 339 aaKnown RBP28.58■■■□□ 2.17
SPNS1-206ENST00000564476 NEO1Q92859 1461 aa28.58■■■□□ 2.17
SPNS1-206ENST00000564476 KIAA1107Q9UPP5 1409 aa28.57■■■□□ 2.16
SPNS1-206ENST00000564476 ZNF644Q9H582 1327 aaPredicted RBP28.55■■■□□ 2.16
SPNS1-206ENST00000564476 SAMD9LQ8IVG5 1584 aa28.54■■■□□ 2.16
SPNS1-206ENST00000564476 CFAP74Q9C0B2 1584 aa28.54■■■□□ 2.16
SPNS1-206ENST00000564476 CAMSAP2Q08AD1 1489 aa28.53■■■□□ 2.16
SPNS1-206ENST00000564476 AKNAQ7Z591 1439 aa28.53■■■□□ 2.16
SPNS1-206ENST00000564476 HNRNPMP52272 730 aaKnown RBP eCLIP28.46■■■□□ 2.15
SPNS1-206ENST00000564476 ADGRL1O94910 1474 aa28.46■■■□□ 2.15
SPNS1-206ENST00000564476 ABCC1P33527 1531 aa28.45■■■□□ 2.15
SPNS1-206ENST00000564476 MBD5Q9P267 1494 aa28.45■■■□□ 2.14
SPNS1-206ENST00000564476 SCAPERQ9BY12 1400 aa28.44■■■□□ 2.14
SPNS1-206ENST00000564476 ARHGEF5Q12774 1597 aa28.43■■■□□ 2.14
SPNS1-206ENST00000564476 DNMT1P26358 1616 aaKnown RBP28.43■■■□□ 2.14
SPNS1-206ENST00000564476 TSPY4P0CV99 314 aa28.42■■■□□ 2.14
SPNS1-206ENST00000564476 TSPY10P0CW01 314 aa28.42■■■□□ 2.14
SPNS1-206ENST00000564476 SYCP2Q9BX26 1530 aa28.39■■■□□ 2.14
SPNS1-206ENST00000564476 ARHGEF12Q9NZN5 1544 aa28.39■■■□□ 2.14
SPNS1-206ENST00000564476 ABCC5O15440 1437 aa28.38■■■□□ 2.13
SPNS1-206ENST00000564476 DAPK1P53355 1430 aa28.38■■■□□ 2.13
SPNS1-206ENST00000564476 CCDC141Q6ZP82 1450 aa28.38■■■□□ 2.13
SPNS1-206ENST00000564476 KDM4FA0A1W2PPD8 638 aa28.37■■■□□ 2.13
SPNS1-206ENST00000564476 DENND4BO75064 1496 aaPredicted RBP28.37■■■□□ 2.13
SPNS1-206ENST00000564476 CROCC2H7BZ55 1655 aa28.35■■■□□ 2.13
SPNS1-206ENST00000564476 ITGAEP38570 1179 aa28.34■■■□□ 2.13
SPNS1-206ENST00000564476 TRAPPC8Q9Y2L5 1435 aa28.34■■■□□ 2.13
SPNS1-206ENST00000564476 ZNF518AQ6AHZ1 1483 aa28.34■■■□□ 2.13
SPNS1-206ENST00000564476 AFAP1Q8N556 730 aa28.32■■■□□ 2.12
SPNS1-206ENST00000564476 SHANK2Q9UPX8 1470 aa28.32■■■□□ 2.12
SPNS1-206ENST00000564476 PTPRKQ15262 1439 aa28.31■■■□□ 2.12
SPNS1-206ENST00000564476 POGZQ7Z3K3 1410 aa28.31■■■□□ 2.12
SPNS1-206ENST00000564476 RTEL1-TNFRSF6BF6WH68 1400 aa28.29■■■□□ 2.12
SPNS1-206ENST00000564476 PCGF6Q9BYE7 350 aa28.29■■■□□ 2.12
SPNS1-206ENST00000564476 ROCK1Q13464 1354 aa28.28■■■□□ 2.12
SPNS1-206ENST00000564476 SPAG9O60271 1321 aaKnown RBP28.28■■■□□ 2.12
SPNS1-206ENST00000564476 MAST1Q9Y2H9 1570 aa28.28■■■□□ 2.12
SPNS1-206ENST00000564476 RAPGEF3O95398 923 aa28.26■■■□□ 2.11
SPNS1-206ENST00000564476 RICTORQ6R327 1708 aa28.26■■■□□ 2.11
SPNS1-206ENST00000564476 C9orf84Q5VXU9 1444 aa28.26■■■□□ 2.11
SPNS1-206ENST00000564476 ANKRD30AQ9BXX3 1397 aa28.24■■■□□ 2.11
SPNS1-206ENST00000564476 ADGBQ8N7X0 1667 aa28.24■■■□□ 2.11
SPNS1-206ENST00000564476 CHIC2Q9UKJ5 165 aa28.24■■■□□ 2.11
SPNS1-206ENST00000564476 KDM5CP41229 1560 aa28.23■■■□□ 2.11
SPNS1-206ENST00000564476 ADGRL2O95490 1459 aa28.22■■■□□ 2.11
SPNS1-206ENST00000564476 MLH3Q9UHC1 1453 aa28.22■■■□□ 2.11
SPNS1-206ENST00000564476 NCOA1Q15788 1441 aa28.2■■■□□ 2.11
SPNS1-206ENST00000564476 MAGI2Q86UL8 1455 aa28.2■■■□□ 2.1
SPNS1-206ENST00000564476 FRMPD1Q5SYB0 1578 aa28.18■■■□□ 2.1
SPNS1-206ENST00000564476 INO80Q9ULG1 1556 aaPredicted RBP28.17■■■□□ 2.1
SPNS1-206ENST00000564476 MYT1LQ9UL68 1186 aa28.17■■■□□ 2.1
SPNS1-206ENST00000564476 ZMYM4Q5VZL5 1548 aa28.15■■■□□ 2.1
SPNS1-206ENST00000564476 HFM1A2PYH4 1435 aa28.15■■■□□ 2.1
SPNS1-206ENST00000564476 PLXNC1O60486 1568 aa28.14■■■□□ 2.1
SPNS1-206ENST00000564476 KIDINS220Q9ULH0 1771 aa28.14■■■□□ 2.09
SPNS1-206ENST00000564476 ZFYVE16Q7Z3T8 1539 aa28.13■■■□□ 2.09
SPNS1-206ENST00000564476 RRP7BPQ9NSQ0 103 aa28.13■■■□□ 2.09
SPNS1-206ENST00000564476 ACIN1Q9UKV3 1341 aaKnown RBP28.13■■■□□ 2.09
SPNS1-206ENST00000564476 ATP7AQ04656 1500 aa28.13■■■□□ 2.09
SPNS1-206ENST00000564476 HECW2Q9P2P5 1572 aa28.12■■■□□ 2.09
SPNS1-206ENST00000564476 HRCP23327 699 aa28.11■■■□□ 2.09
SPNS1-206ENST00000564476 GCC2Q8IWJ2 1684 aa28.1■■■□□ 2.09
SPNS1-206ENST00000564476 KIF15Q9NS87 1388 aa28.1■■■□□ 2.09
SPNS1-206ENST00000564476 NAIPQ13075 1403 aa28.09■■■□□ 2.09
SPNS1-206ENST00000564476 SETD5Q9C0A6 1442 aa28.09■■■□□ 2.09
SPNS1-206ENST00000564476 DUOX2Q9NRD8 1548 aa28.04■■■□□ 2.08
SPNS1-206ENST00000564476 DHX29Q7Z478 1369 aaKnown RBP28.04■■■□□ 2.08
SPNS1-206ENST00000564476 ANKRD50Q9ULJ7 1429 aa28.02■■■□□ 2.08
SPNS1-206ENST00000564476 ATP10AO60312 1499 aa28■■■□□ 2.07
SPNS1-206ENST00000564476 ERBINQ96RT1 1412 aa28■■■□□ 2.07
SPNS1-206ENST00000564476 ABCA6Q8N139 1617 aa28■■■□□ 2.07
SPNS1-206ENST00000564476 ARHGEF40Q8TER5 1519 aa27.99■■■□□ 2.07
SPNS1-206ENST00000564476 YEATS2Q9ULM3 1422 aa27.99■■■□□ 2.07
SPNS1-206ENST00000564476 A2MP01023 1474 aa27.98■■■□□ 2.07
SPNS1-206ENST00000564476 DIP2CQ9Y2E4 1556 aa27.98■■■□□ 2.07
SPNS1-206ENST00000564476 RAB3GAP2Q9H2M9 1393 aa27.96■■■□□ 2.07
SPNS1-206ENST00000564476 REREQ9P2R6 1566 aa27.93■■■□□ 2.06
SPNS1-206ENST00000564476 ADAMTSL3P82987 1691 aa27.93■■■□□ 2.06
SPNS1-206ENST00000564476 BCORL1Q5H9F3 1711 aa27.9■■■□□ 2.06
SPNS1-206ENST00000564476 EIF2AK4Q9P2K8 1649 aaKnown RBP27.9■■■□□ 2.06
SPNS1-206ENST00000564476 KIF3BO15066 747 aa27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 203.4 ms