RNA–Protein interactions for RNA: ENST00000564440.5

PKM-212, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 3,016 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-212ENST00000564440 FAM50AQ14320 339 aaKnown RBP13.83□□□□□ -0.19
PKM-212ENST00000564440 NEUROD1Q13562 356 aa13.81□□□□□ -0.2
PKM-212ENST00000564440 FRMPD1Q5SYB0 1578 aa13.81□□□□□ -0.2
PKM-212ENST00000564440 REREQ9P2R6 1566 aa13.81□□□□□ -0.2
PKM-212ENST00000564440 LRRC9Q6ZRR7 1453 aa13.81□□□□□ -0.2
PKM-212ENST00000564440 MYT1Q01538 1121 aa13.8□□□□□ -0.2
PKM-212ENST00000564440 KDM5CP41229 1560 aa13.8□□□□□ -0.2
PKM-212ENST00000564440 PLCH2O75038 1416 aa13.8□□□□□ -0.2
PKM-212ENST00000564440 BCORL1Q5H9F3 1711 aa13.79□□□□□ -0.2
PKM-212ENST00000564440 NPM1P06748 294 aaKnown RBP eCLIP13.78□□□□□ -0.2
PKM-212ENST00000564440 ARHGEF5Q12774 1597 aa13.78□□□□□ -0.2
PKM-212ENST00000564440 ABCC1P33527 1531 aa13.78□□□□□ -0.2
PKM-212ENST00000564440 MAST1Q9Y2H9 1570 aa13.77□□□□□ -0.2
PKM-212ENST00000564440 CENPBP07199 599 aaPredicted RBP13.77□□□□□ -0.21
PKM-212ENST00000564440 CROCC2H7BZ55 1655 aa13.75□□□□□ -0.21
PKM-212ENST00000564440 TCOF1Q13428 1488 aaKnown RBP13.75□□□□□ -0.21
PKM-212ENST00000564440 GTF3C3Q9Y5Q9 886 aa13.74□□□□□ -0.21
PKM-212ENST00000564440 PLEKHH2Q8IVE3 1493 aa13.74□□□□□ -0.21
PKM-212ENST00000564440 KIAA1107Q9UPP5 1409 aa13.74□□□□□ -0.21
PKM-212ENST00000564440 DIEXFQ68CQ4 756 aaKnown RBP13.73□□□□□ -0.21
PKM-212ENST00000564440 MIA2Q96PC5 1412 aa13.73□□□□□ -0.21
PKM-212ENST00000564440 SAMD9LQ8IVG5 1584 aa13.73□□□□□ -0.21
PKM-212ENST00000564440 GPATCH8Q9UKJ3 1502 aaKnown RBP13.73□□□□□ -0.21
PKM-212ENST00000564440 MAGI2Q86UL8 1455 aa13.73□□□□□ -0.21
PKM-212ENST00000564440 CDK11AQ9UQ88 783 aaPredicted RBP13.73□□□□□ -0.21
PKM-212ENST00000564440 CD109Q6YHK3 1445 aa13.73□□□□□ -0.21
PKM-212ENST00000564440 KDM6BO15054 1643 aa13.72□□□□□ -0.21
PKM-212ENST00000564440 TSPOAP1O95153 1857 aa13.72□□□□□ -0.21
PKM-212ENST00000564440 INO80Q9ULG1 1556 aaPredicted RBP13.71□□□□□ -0.21
PKM-212ENST00000564440 CHIC2Q9UKJ5 165 aa13.71□□□□□ -0.22
PKM-212ENST00000564440 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.7□□□□□ -0.225e-8■□□□□ 8.5
PKM-212ENST00000564440 NCOA2Q15596 1464 aa13.7□□□□□ -0.22
PKM-212ENST00000564440 ARHGEF40Q8TER5 1519 aa13.69□□□□□ -0.22
PKM-212ENST00000564440 FAM135AQ9P2D6 1515 aa13.68□□□□□ -0.22
PKM-212ENST00000564440 PLEKHD1A6NEE1 506 aa13.68□□□□□ -0.22
PKM-212ENST00000564440 PLXNC1O60486 1568 aa13.67□□□□□ -0.22
PKM-212ENST00000564440 SHANK2Q9UPX8 1470 aa13.67□□□□□ -0.22
PKM-212ENST00000564440 FANCAO15360 1455 aa13.67□□□□□ -0.22
PKM-212ENST00000564440 ADGBQ8N7X0 1667 aa13.66□□□□□ -0.22
PKM-212ENST00000564440 ZNF777Q9ULD5 760 aaPredicted RBP13.66□□□□□ -0.22
PKM-212ENST00000564440 POGZQ7Z3K3 1410 aa13.66□□□□□ -0.22
PKM-212ENST00000564440 MLH3Q9UHC1 1453 aa13.66□□□□□ -0.22
PKM-212ENST00000564440 HECW2Q9P2P5 1572 aa13.65□□□□□ -0.22
PKM-212ENST00000564440 DNMT1P26358 1616 aaKnown RBP13.64□□□□□ -0.23
PKM-212ENST00000564440 AKNAQ7Z591 1439 aa13.64□□□□□ -0.23
PKM-212ENST00000564440 MBD5Q9P267 1494 aa13.63□□□□□ -0.23
PKM-212ENST00000564440 MYOM3Q5VTT5 1437 aa13.63□□□□□ -0.23
PKM-212ENST00000564440 MTUS2Q5JR59 1369 aa13.63□□□□□ -0.23
PKM-212ENST00000564440 KIDINS220Q9ULH0 1771 aa13.63□□□□□ -0.23
PKM-212ENST00000564440 AGLP35573 1532 aa13.63□□□□□ -0.23
PKM-212ENST00000564440 RTEL1-TNFRSF6BF6WH68 1400 aa13.63□□□□□ -0.23
PKM-212ENST00000564440 EIF2AK4Q9P2K8 1649 aaKnown RBP13.63□□□□□ -0.23
PKM-212ENST00000564440 ZNF518AQ6AHZ1 1483 aa13.62□□□□□ -0.23
PKM-212ENST00000564440 PTPN23Q9H3S7 1636 aa13.62□□□□□ -0.23
PKM-212ENST00000564440 ZNF644Q9H582 1327 aaPredicted RBP13.61□□□□□ -0.23
PKM-212ENST00000564440 FAM69CQ0P6D2 419 aa13.61□□□□□ -0.23
PKM-212ENST00000564440 COL17A1Q9UMD9 1497 aaPredicted RBP13.61□□□□□ -0.23
PKM-212ENST00000564440 ARHGAP5Q13017 1502 aa13.61□□□□□ -0.23
PKM-212ENST00000564440 ZFYVE16Q7Z3T8 1539 aa13.6□□□□□ -0.23
PKM-212ENST00000564440 ARHGEF12Q9NZN5 1544 aa13.6□□□□□ -0.23
PKM-212ENST00000564440 KCNH8Q96L42 1107 aa13.6□□□□□ -0.23
PKM-212ENST00000564440 DENND4BO75064 1496 aaPredicted RBP13.6□□□□□ -0.23
PKM-212ENST00000564440 DIP2CQ9Y2E4 1556 aa13.59□□□□□ -0.23
PKM-212ENST00000564440 RRP7BPQ9NSQ0 103 aa13.58□□□□□ -0.23
PKM-212ENST00000564440 ADGRL1O94910 1474 aa13.58□□□□□ -0.24
PKM-212ENST00000564440 ADGRL2O95490 1459 aa13.58□□□□□ -0.24
PKM-212ENST00000564440 CAMSAP2Q08AD1 1489 aa13.58□□□□□ -0.24
PKM-212ENST00000564440 RRBP1Q9P2E9 1410 aaKnown RBP13.58□□□□□ -0.24
PKM-212ENST00000564440 ABCA6Q8N139 1617 aa13.58□□□□□ -0.24
PKM-212ENST00000564440 RNF17Q9BXT8 1623 aaKnown RBP13.57□□□□□ -0.24
PKM-212ENST00000564440 SYCP2Q9BX26 1530 aa13.56□□□□□ -0.24
PKM-212ENST00000564440 MROH2AA6NES4 1674 aa13.56□□□□□ -0.24
PKM-212ENST00000564440 DEPDC5O75140 1603 aa13.55□□□□□ -0.24
PKM-212ENST00000564440 ADAMTSL3P82987 1691 aa13.55□□□□□ -0.24
PKM-212ENST00000564440 CCNB3Q8WWL7 1395 aa13.55□□□□□ -0.24
PKM-212ENST00000564440 FGD6Q6ZV73 1430 aa13.55□□□□□ -0.24
PKM-212ENST00000564440 CCDC141Q6ZP82 1450 aa13.54□□□□□ -0.24
PKM-212ENST00000564440 SIGLEC1Q9BZZ2 1709 aa13.54□□□□□ -0.24
PKM-212ENST00000564440 RSPH4AQ5TD94 716 aa13.53□□□□□ -0.24
PKM-212ENST00000564440 ATP7AQ04656 1500 aa13.53□□□□□ -0.24
PKM-212ENST00000564440 EFCAB2Q5VUJ9 269 aa13.52□□□□□ -0.24
PKM-212ENST00000564440 ZC3H13Q5T200 1668 aaKnown RBP13.52□□□□□ -0.25
PKM-212ENST00000564440 ZNF316A6NFI3 1004 aaPredicted RBP13.51□□□□□ -0.25
PKM-212ENST00000564440 GCC2Q8IWJ2 1684 aa13.51□□□□□ -0.25
PKM-212ENST00000564440 SIN3AQ96ST3 1273 aa13.5□□□□□ -0.25
PKM-212ENST00000564440 FOXD1Q16676 465 aa13.5□□□□□ -0.25
PKM-212ENST00000564440 KDM5DQ9BY66 1539 aa13.5□□□□□ -0.25
PKM-212ENST00000564440 SCAPERQ9BY12 1400 aa13.49□□□□□ -0.25
PKM-212ENST00000564440 HIRIP3Q9BW71 556 aaPredicted RBP13.48□□□□□ -0.25
PKM-212ENST00000564440 C9orf84Q5VXU9 1444 aa13.47□□□□□ -0.25
PKM-212ENST00000564440 ATP10AO60312 1499 aa13.47□□□□□ -0.25
PKM-212ENST00000564440 VWDEQ8N2E2 1590 aa13.47□□□□□ -0.25
PKM-212ENST00000564440 ROCK1Q13464 1354 aa13.46□□□□□ -0.25
PKM-212ENST00000564440 TRAPPC8Q9Y2L5 1435 aa13.46□□□□□ -0.25
PKM-212ENST00000564440 YTHDC1Q96MU7 727 aaKnown RBP13.46□□□□□ -0.26
PKM-212ENST00000564440 UNC13BO14795 1591 aa13.45□□□□□ -0.26
PKM-212ENST00000564440 DUOX2Q9NRD8 1548 aa13.45□□□□□ -0.26
PKM-212ENST00000564440 MROH1Q8NDA8 1641 aa13.44□□□□□ -0.26
PKM-212ENST00000564440 DAPK1P53355 1430 aa13.44□□□□□ -0.26
PKM-212ENST00000564440 PTPRKQ15262 1439 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms